Eaen020222.1
Basic Information
- Insect
- Eristalinus aeneus
- Gene Symbol
- grau
- Assembly
- GCA_955652365.1
- Location
- OY019133.1:52666636-52669568[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0012 0.18 13.0 0.1 2 23 286 308 285 308 0.94 2 10 2.5 3.6e+02 2.6 0.1 6 23 317 334 317 334 0.97 3 10 0.0015 0.22 12.7 0.8 1 23 340 363 340 363 0.94 4 10 2.3e-05 0.0033 18.5 1.6 1 23 371 393 371 393 0.96 5 10 8.7e-06 0.0012 19.8 0.7 1 23 401 424 401 424 0.95 6 10 0.37 54 5.2 0.1 3 23 432 452 430 452 0.94 7 10 0.0065 0.93 10.7 0.5 2 23 461 482 460 482 0.97 8 10 4.2e-06 0.0006 20.8 0.1 1 23 487 510 487 510 0.97 9 10 1e-05 0.0014 19.6 3.8 1 23 516 538 516 538 0.98 10 10 5.7e-06 0.00082 20.4 5.3 1 23 544 567 544 567 0.98
Sequence Information
- Coding Sequence
- ATGGTTTGTCGTTTATGTTTACTTGAAGCAGATAAAAGCATACTGATATTTAGTGAAGAAAAAATTCAGAAGTACATAAGAAAATTTCTGCAGTTGGAGCTTACTGCAGAAGATCCGGTTTCAAAAGTTATTTGCTCAATATGTTGGGAGCAGCTGgagaactttcaaaatttctactTTCGCGTGGAGAAAGCGCAGAAAAGTTTAATCTCCACTCACGATAATGAATTTAAAGAAGACGTTTTCACTGGAAATCAAGTTCCTGCTAATAATTCTGCTTTCTTAGGGATTCATTCTGATTCAAGTAATGCTCTTAAATGTGCACATTCAGCAATTAACACTTGTATACTTTTAGATTTAAGTAAACTAAAGGAGGAAACATCAAACGCAAATTCAGACGATGAAAGTCAAAACAATAGTGATACATATCCTTGCGtttatgatgatgatgtcgtcgTAAAAGTTGAAGAAAACAACGGTGAACGAGCCGAAACCTCCGTTAATTTTAATACAGAACCCAATGAATTGTCATTTACTCGAAGAATCACTAGAGGGTCGTTGTTAAATAATCCAATAACATGCGAAAAAACTCCTGATGAAGGTGTACCAAAACGAAAACGGGGTAGGCCCAAGAAAGGATTAAATGATGATGCGCACGGGGCAGAAACCAAGGAAGAAGACATAGAGGACAAAAATATTACCTGCGCTCCAGAGCAAAATGAAAAACGACGACGAGGTCGACctaaaaaaggagaagaaagacCAAAAATCAAGAAGGTTCGTTCGGAAAAATGTGAAAGAATATTAGAAACTGCCAAGGAATTCGATGAAATAATTCAGAAGCACATGAATCTAGTCTGCAATATCTGTGGCGTTAGCTTAATTGACTTTGCCGAGTTAAAAAGGCACTTCAGGGCGATGCACAATCGTAAGGGTTACGCTGTATGCTGCAACAAGCGACTTTATAAGCGAGGTCTGGTTGTTGATCACATTAACACACATAACAACCCAGAATATTTTAAATGTCAAGAGTGCGGCAAAGTCATGGCCGATAGAATGTGTCTCAGAAATCATGTTCTGCTGTTGCATCAAAACGAAGAAGCGAAAATGTTTCCCTGTCCATACTGCCCAAAAAAATACGCCAAGCAGTATTTATTAGAACATCACCGTGTAAAACATATTCCGAAGGAAGAGTGCACATTCTTTTGTGCAGAATGTGACAAAGGGTTTCCTACAAAAACCACCCTCACCAAGCATTTAAATCAGATTCACTCAACAGTGTATGATAAAATGTGCGAAATTTGCGCGAAACTAATACGAGGAAATGCTGCTTTTGAACGACACATGGATGAGCATGAGGGTATTGTTCGGCCTCAGGTTCAGTGCGAAATCTGTGGTTCATGGCTAAAGGATAAAAATAGCTTAAGGAAGCACATGTACAAACATGACGGAAAATCATACACTTGCAATGAATGCGGAAAAGTTGCTCCATCAAAGAGTGCCCTGCAAAGTCATCTTAAATATGTACATCAAACGCTGCGCCAATTTCATTGTACATTTTGTGATAAATCATTCAAAAAAGCTGTCAACTTAAGAGAACATTTAACAACTCATACGGGAGAAGTATTGTACACCTGCCCACATTGcccaaaaacatttaattcaaaagcCAATATGCACGCACATCGAAAAAAGAAACATCGGGAAGAGTGGGAGGCTAATAGACGGTACAATATTAAGCAAGCACCCGTGGCGGAAACAAATTCTAATTAG
- Protein Sequence
- MVCRLCLLEADKSILIFSEEKIQKYIRKFLQLELTAEDPVSKVICSICWEQLENFQNFYFRVEKAQKSLISTHDNEFKEDVFTGNQVPANNSAFLGIHSDSSNALKCAHSAINTCILLDLSKLKEETSNANSDDESQNNSDTYPCVYDDDVVVKVEENNGERAETSVNFNTEPNELSFTRRITRGSLLNNPITCEKTPDEGVPKRKRGRPKKGLNDDAHGAETKEEDIEDKNITCAPEQNEKRRRGRPKKGEERPKIKKVRSEKCERILETAKEFDEIIQKHMNLVCNICGVSLIDFAELKRHFRAMHNRKGYAVCCNKRLYKRGLVVDHINTHNNPEYFKCQECGKVMADRMCLRNHVLLLHQNEEAKMFPCPYCPKKYAKQYLLEHHRVKHIPKEECTFFCAECDKGFPTKTTLTKHLNQIHSTVYDKMCEICAKLIRGNAAFERHMDEHEGIVRPQVQCEICGSWLKDKNSLRKHMYKHDGKSYTCNECGKVAPSKSALQSHLKYVHQTLRQFHCTFCDKSFKKAVNLREHLTTHTGEVLYTCPHCPKTFNSKANMHAHRKKKHREEWEANRRYNIKQAPVAETNSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00671735;
- 90% Identity
- -
- 80% Identity
- -