Basic Information

Gene Symbol
ncor1
Assembly
GCA_955652365.1
Location
OY019132.1:26185793-26197830[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.9e-08 0.00013 22.6 0.0 3 43 678 718 677 720 0.97

Sequence Information

Coding Sequence
ATGCATGGAATGACAACAAGAAGGGACTGTGTATGGCCGGTCGATACACCGCAATCGTATGCGAAGGGTGGCATTGGACCGCCGCCCACGCAACAACAGCCTCAATCCCGTTCGGCAACTAGTCCCCTCTCACCGCCACGTCCCGGACCTGGAGCAGCAGCAAATACCTATCCAAAATTTGCCGATGTCAATGCAGTGCGCGAAGCGCCACATCGCTACATACAGCAAAGCTCGTATAGTATCGGTCCGGTTGCGCAATACCGCGAGAGCCCATACACTCGAATACCTCAGATGCCGCCAGCCCAAGTCCAGGACTATCATCGTGCAGCCGCGGCAGCAGTCGCTTCATCAACTGTTGTCGTATCGAGCAATAACAGCCTACCAACGATTGTATCTGGCGTACCCTCCGCCAATACGATGGACGGATCGGCGGTGCAGTTCTCCCATGCGCCCTCTGGTCAGATGCTGCCCGGTGTCAGTGTAGTTGGAGGCGGTGCCGGTGGTCCTGGAAACATGTTAGCGGTTGCCCGTCAGCGCCTACCCACGGTTCTGCTACAGCACTCGCAGCCGTCAACAGTGCAGTACGCATCTAATGAGTACATTGCACATGCgagacagcagcagcagcaaacgcAGCAGGCACCGCCAGATCCTGGAGGGCAGCCGTACAAGAAGATGCGACTCAGCGACTCAAATCACCTGCCACCTGTAGTTTCAAGTATGAACGCTGTTGGTCCACAAAGTATACCTTCCCAAACTCATCCGCATTCGCAACTCCAGCAAcagcatcagcaacagcaacaacaacaacagcaacatcaacagcaacaacaacaacagcaacatcaacagcagcaacaacaacaacaacaacaacagcaaccgcaACCCTccccacagcagcagcagcaacaacatcaacaacaatctATCCCCCAGCAGTCGCAGCATCCGTCGCAACAATCCTCTCAGCCACCACCACAGCTACAGCAGCAGCCGGCGCCATCGTCCCTCATAGTCAACCGGGGCTCGCATCTTATACAGTCGCATCCGCAGCCGCCACCGGGTACACTACTGACAAGCAACATTAACAGTAGTGTTCCCAACAGCGGTCACCAATCGGCGATAATCAATATTCCAGCGACGCAACAACTCAAGATTGAGACGCGTGAACACCAGCGGCCCCCACAGACGACTGAAGCCTATCACCCCCAGGTAGAGGCGATCTCCCCCACACTGCCAAATGACACCGCCGAAGAGCGTCGCACCGCTAAAGAGGACCTTCTGATGCAAATTCAAAAAGTCGACCAGGAGATCGTTAATGCGGAGAACACGATGGCCAGTCTGCAAAAGAAGGCGGAACTTTTGCAGGAAGCTTCTAGTAAGCCGAAGAAGGAGGCGGAGGAGAAGTCCCTACAGCCGAAGCGACGCAACCAAAGCCTGGCCCAAAAGATCTACGACGAGAATCGTAAGATCTCTGCCTCTCGACATTCCATTCTGAGTTCGCTTGGTCCACCCATTGAGCTGCCACTGTACAATCAGCCATCCGATGTGGAAGCCTGCATGGAAGTTATCAGCCGCCATCATGCGACGATGAAGACGCGTCTGCTCCAGCATTTAAAGAAGGTCAAACACGATCGATACGTTCGCAACACCGGCCTGGTGGAGAAATACGCTCAAGCGTCGCAGGAGTGGTTGAAGCGGGTTGAAAAATCTGAGTCTAGCGCTAAGCGAAAAGCACGTGAAGCAAAGAACCGCGAGTTCTTCGAGAAAGTTTTTACAGAGCTTCGAAAACAGCGCGAGGACAAGGAGCGCTTTAATCGCGTCGGATCACGGATCAAATCCGAGGCCGATCTAGAAGAGATTATGGATGGCCTGCAAGAGCAGGCGATGGAAGATAAGAAAATGCGGTCTTATGCTGTGATACCACCACTGATGTATGACTCTAAACAAAGGCGCTGCATCTACCACAACGAGAATGGCGCCCTGGTCGACATGGTGGCAGACTACAAGGACCGCCAGAACATAAACGTCTGGACAGCGGGTGAGAAGGAGATCTTTAAGGAGAAGTTCCTGCAGCACCCGAAGAATTTTGGCGCGATTGCGGCTAGTCTAGACCGAAAGTCTGCGCAAGATTGTGTTCGCTACTACTACCTCAGTAAAAAGACGGAGAACTACAAGCAGCTGCTTCGAAAGTCGCGGCAGCGCACGCGTAGCTCCCGCAATCCGCAGAAGTCGCAACAAGCGCAAACACAATGCATAATCGACTCGCTAACCACTGGGGTGACGACGCGCCTGCAGCGTGAACAGCAACAAAAAACCGGTGGTCGTGATCGGTCAGCTGCCGCACACTTGTCGCATAACAATTCGTCAGCTTCGTCGAGCAGTGTAACAACGTCGGCCGCTTCGTCATCTTCGACAACAACGACGTCATCAGCCGCAACATCGTCATCAGCGGGCCACAGTTCAACTACAACCAATACAACAGGTTCGTCTGGCAATGCGGTCTCGTCATCAAAGTCATCCGGTTCGTCAACCACGACTTTGACCACAACTGCATCTTTCTCGACCACATCGTCCAGCAAGCCAACAAGTGATTCGTCTGTAACTGCCGCCTCAGCAGCAGTGACTTTGACGTCGTCCACGACGTCCGTCACCACTTCCAGTGCTCCTTCATCTGCTGCGACGACATCAAGTACAACAACCTCAACAACTGCGCCCACATTGTCTTCGTCATCGACGACTTCGGGCTCCGCATCCAGTGCGTCCGCAACAGTCGATTCCACTTTGAGAGGCACTGTGGATCGTAAGTCACCCTTATCAGCAACTGCAGCGGTTCCAAACTCGACTACTGGAAAAGAAGATAAGTTCGAAAGCTCTGTGAAAAGTGTCCTCAGTTTAGAAACAAATGGACCCAAGACATCAACCACATCAGACGGAAGTGGTGAGAAGTCAAGCGGTGCCCTAGGTTCCACAGAGTTGAAAAGTAGCGAAGACAAGGCTGGCAGCGGTTCTGCATCGAATGTTGCTGGCGACAAAGATGTGTCCACGGGAACACCGCCACCCAAGTcatcgactccgaacgccgcCGGAAATGGCAACATTAAGTCCCCCACGGATGGCAGTTCGCTGCAACAACAGCAGAACAACAACAGTGTAGTGCTGAATTCCAGTGCACATCCAGTGGGTGCACCGAACGGCATCAAAACCTCATACGCAGCTGTATACGCTTCGTCTATCAATGCATCGGCGGGAGGCGTTAATGACAGCAAATCTGGACCAGCAACGGGGGTTGTCGGCGGTGGAGGTGACAAGGACTCCAGTGGGTTGAAAATGACAGAAGGTGGTCTTCTTATACCAGGTCAGAAAACAAAGGCGACCGACGTTGATGGCGGCATTGACAACAACTCAGATGTTAGTGATCCAAAGAAGAAACACCTGGACACGGATACGACACCGACGCCTACCAACTCAACAAACGATGCTGTATCGGTGGTCACACCATCTGACAATAACCCGTCTGACAACAAAGTTTCAGTTCGGTTGCTCGCTTCAGTTGATTGGTACTACTTTATTCTCCCGTACACGGTGGACACAAACGGACACAATTTTCGTATGAATATAGAATGA
Protein Sequence
MHGMTTRRDCVWPVDTPQSYAKGGIGPPPTQQQPQSRSATSPLSPPRPGPGAAANTYPKFADVNAVREAPHRYIQQSSYSIGPVAQYRESPYTRIPQMPPAQVQDYHRAAAAAVASSTVVVSSNNSLPTIVSGVPSANTMDGSAVQFSHAPSGQMLPGVSVVGGGAGGPGNMLAVARQRLPTVLLQHSQPSTVQYASNEYIAHARQQQQQTQQAPPDPGGQPYKKMRLSDSNHLPPVVSSMNAVGPQSIPSQTHPHSQLQQQHQQQQQQQQQHQQQQQQQQHQQQQQQQQQQQQPQPSPQQQQQQHQQQSIPQQSQHPSQQSSQPPPQLQQQPAPSSLIVNRGSHLIQSHPQPPPGTLLTSNINSSVPNSGHQSAIINIPATQQLKIETREHQRPPQTTEAYHPQVEAISPTLPNDTAEERRTAKEDLLMQIQKVDQEIVNAENTMASLQKKAELLQEASSKPKKEAEEKSLQPKRRNQSLAQKIYDENRKISASRHSILSSLGPPIELPLYNQPSDVEACMEVISRHHATMKTRLLQHLKKVKHDRYVRNTGLVEKYAQASQEWLKRVEKSESSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMYDSKQRRCIYHNENGALVDMVADYKDRQNINVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPQKSQQAQTQCIIDSLTTGVTTRLQREQQQKTGGRDRSAAAHLSHNNSSASSSSVTTSAASSSSTTTTSSAATSSSAGHSSTTTNTTGSSGNAVSSSKSSGSSTTTLTTTASFSTTSSSKPTSDSSVTAASAAVTLTSSTTSVTTSSAPSSAATTSSTTTSTTAPTLSSSSTTSGSASSASATVDSTLRGTVDRKSPLSATAAVPNSTTGKEDKFESSVKSVLSLETNGPKTSTTSDGSGEKSSGALGSTELKSSEDKAGSGSASNVAGDKDVSTGTPPPKSSTPNAAGNGNIKSPTDGSSLQQQQNNNSVVLNSSAHPVGAPNGIKTSYAAVYASSINASAGGVNDSKSGPATGVVGGGGDKDSSGLKMTEGGLLIPGQKTKATDVDGGIDNNSDVSDPKKKHLDTDTTPTPTNSTNDAVSVVTPSDNNPSDNKVSVRLLASVDWYYFILPYTVDTNGHNFRMNIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00671540;
90% Identity
iTF_00671540;
80% Identity
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