Basic Information

Gene Symbol
Snapc4
Assembly
GCA_955652365.1
Location
OY019130.1:8057684-8060894[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.2 3.7e+03 -1.2 0.0 22 46 241 267 225 267 0.67
2 6 1.2e-09 2e-06 28.5 0.1 1 44 273 317 273 319 0.95
3 6 4.3e-14 7.3e-11 42.7 0.1 1 43 328 374 328 376 0.96
4 6 1.3e-10 2.2e-07 31.6 0.0 2 44 384 427 383 429 0.92
5 6 7.9e-14 1.4e-10 41.8 0.0 4 42 438 477 437 480 0.97
6 6 1.2e-12 2e-09 38.1 0.1 3 42 723 763 721 764 0.96

Sequence Information

Coding Sequence
ATGGAAACCTTCCAGTCAATTGCAGATACGTCTGTCCAGATTCAAAACTGCAAGGAGGAAACAttcaataataatgacaatagcTATGAAGTATTCACCGATACAAAGGATATTGACCAGGACGAAGACTTTGTCGAGGATGGAGAAGGCGAAGACAACGATTTAAGCTTTGAGGGAGGGCTTGAAGTAGATTATTTAAGAGAGTCCCTAAAAACTCTTGAAGGTCATGCAGAAATTGGAACAGACAATGCACTTATGCTTAATCAAAAGATGCAGGGGATGTTGGAAAAGCTTCGCGATAAAGTAATTTCGATGCTCAATAAATGCCGCCAACAATACCTAGATAATCAACAAAAACTGTTGAACCCCGTGTCTAAAATGACATTGATTGGGGGAATTGGTAGTTGTGGCGCTCCGTTTTTTAAAGATGCTCGCGGCAAGCCATGTCCGCCCAATGCGGACTATTTGTATAGGAGTGAAGTTGAAAAGGAATTGTTTCCTGGCGATTTGGATCATTATCCACACTTTGTTTGGACTGCAACCGACAAACTGGGAATACTTCAGGGAGTTAAGGAACAGGCCATCGAGTACATCGAACGAAAACAAGCCTACCCATCAGGAAAAAATTGTCTATCTTCTtcaaagttaaacaaaaatgttaaacttcaTTCACTGAAACTCACGGAGCTGCTAGCTGAAGTAGATGAAAATTTTGCGATTGACTGGAATCAAATCTCCGTATACAACCTCAAGTTACGACACACAGCGACCAGTTGTTACGCTATTTGGAATGTTTACCTTAAACCTGATATAAATCGTGGCGAATGGACGGAGGAAGAGAATATGAAGTTGAACGCACTAgcaaggaaaaacaaatttcaagattGGATGGCCATAGCTGCTCAAATCGAGGGCAGATCCGATTATCAGTGTTTCATTCAGTATCAAACCGTTGTGTCCATTCAGATGCGGGAGGACAAGAGGGAACGATGGACGAAGGAAGAAGACGAGCTGTTGCTCAGTTTAGTCGAGAAGCATAGAATGGGAAACGTGATCCGTTGGAACCCAATTTGTTCTCAGTTTCCCAATCGAAGCAAGAGCCAATGTTTTGCTCGGTACATGTACAGCATTAATCCTTCAATTTCAAGAGCCCCATTCACTCCTGAAGAGGATTGTATCATTTTAGCTGCCGTTGCAGAGTACGGGGAAAACTTTAACGTTTTCCCCAGATCACTTTTTCCCAACAGAACAGTTATCCAAATTCGGAACCGGTACTACAATTCCATAAAAGTTCGTGAAAAAACTCGCTTCTGGACTCCCGCCGACGACAAAACATTACTCCAGTTGGTAGCAAAGTATGGAAGCCACGATTGGAGGAAGATCGCTGACGAGATTAAAACACATTCTCGGACAAGCTGTCGAACTCGTTTTTTTGTgatatcaaaatttcttaaGGATAACCCCAACGCAAGTTTGGTTGATTTGCCGAGGAAAAAACGCGGTCCCGTCTCTACAGTAACGCCGCTAAATTGGATGAACAAAATTGTGGAAATACAGGAGAATGGGTACGAGGTACGTCGTACAAAAGATCCTAAAAAGGTATTTTACAGATTTCGATTGCGTAACAACGAGCTCAAATGGTACAACATGCTGAAGTATGCCTACGACTTCTCATACTTCAAGTCGTTCAGCAAGGTTCCAGATTCGATGGTCGGTTTGGATTTCGTCAAATCCGTCCTAAATGTGGATTTACAACCACCGATTGTCCTTCAAAAACCGTACTCCTCCTGGGCAGTTCGATTGAACTTAGAGAAACTTATTCGCACACAAGCTGAAACCGACAAGTCAGAGGTTGTTAATCTATCAGGATACAGTCTTCCCCCAAGCTATTGCACACTACTTGGCTTTCGTGGCTTATGCATACTGACGTCATCCTGTGACGAACAAATCAGTTCGCCATCAAATGACACAGAGGCTGGTTGCAGAGCAAAGGCAAAATTCCGACAGCGTATCCTGTCCTTACTGTATAAAACGACTTTACTAAGCCGCTTAGACCCAGACGACGTAgtggaaaagacaaattttgagGTGGTCTTTCAAATGAACACTTCATTGGGCAGAAAAGCTGATAGAAGTTTGGACATAAATGTTCACGGAAAATCTGATAACTGGACAACGGCAGAAGACAAAATGTTACTCCAGCTGGTGACCAAGTACGGAAGTCATAAGTGGGAAAAGATTGCCAAAGAAATTAGAACGCACTCTTCGGACAATTGTCGAGCACGTTTTTTTATCATTTCGGAACGCCCCATGGATAAGTCAATTGCTAATCTGAGGGAAGTACCACAGCAAAACTTAATGAAAATACAGGAAAATGAAAGTCACCTACGTAGAGTAATAGATCCAAAAAAGGAGTTTTACAGATTTCGGTTGCGCAACAATGAATTGATATGGTACAACATTCTAAAGTACGCATACGACTTCTCGTACTTTAAATCCTTTAGTCGGGTTACAAATTCAATAGTGGCCTTGAATTTCGTTAAATCTGCGTTAAGTGTATACTTACAGCCGCCGGTTGCCCTTCAAAAACCGTATTGCTCGGGAGCAGTACGATTAAACATAGAAAAGCTCGTTCGCGCTCAATTTGAAGACGACAGTTCCGAGGTTGCCAAACAACAAGAATACAAACTTCCTCCGAGCTATTGCACGCTCCTTGGCTTTCGCGGTTTATGCATTCTAACGTCATCCTGTATCGAACAAACCAGTTCGCCATCAAACGACTTAGAGGCTGGGCGTAGGGCAAAGGAAAAGTTCCGGCAGCGCCTCTTGACTCTGCTGTACAACACGGCACTCCTCAGCCGCTTAGATCCAGACGACGTAGTGGAAAAGActaacttcgaggtagtctttGACCCCAACACTTCATTTGGCAGAGCCGCCAGCATAAGTTTAGCTGAGTTGCGAGTTTCCCAAACGAACTCTATTGCTGAGAATATTGTCAAAGCATCCCGCAAAGCAAAGAGAACATTAAACACGAGCGAGCATAGCCCAGTTAAGAAGATAAAAGAAGTCGATATGGAATAA
Protein Sequence
METFQSIADTSVQIQNCKEETFNNNDNSYEVFTDTKDIDQDEDFVEDGEGEDNDLSFEGGLEVDYLRESLKTLEGHAEIGTDNALMLNQKMQGMLEKLRDKVISMLNKCRQQYLDNQQKLLNPVSKMTLIGGIGSCGAPFFKDARGKPCPPNADYLYRSEVEKELFPGDLDHYPHFVWTATDKLGILQGVKEQAIEYIERKQAYPSGKNCLSSSKLNKNVKLHSLKLTELLAEVDENFAIDWNQISVYNLKLRHTATSCYAIWNVYLKPDINRGEWTEEENMKLNALARKNKFQDWMAIAAQIEGRSDYQCFIQYQTVVSIQMREDKRERWTKEEDELLLSLVEKHRMGNVIRWNPICSQFPNRSKSQCFARYMYSINPSISRAPFTPEEDCIILAAVAEYGENFNVFPRSLFPNRTVIQIRNRYYNSIKVREKTRFWTPADDKTLLQLVAKYGSHDWRKIADEIKTHSRTSCRTRFFVISKFLKDNPNASLVDLPRKKRGPVSTVTPLNWMNKIVEIQENGYEVRRTKDPKKVFYRFRLRNNELKWYNMLKYAYDFSYFKSFSKVPDSMVGLDFVKSVLNVDLQPPIVLQKPYSSWAVRLNLEKLIRTQAETDKSEVVNLSGYSLPPSYCTLLGFRGLCILTSSCDEQISSPSNDTEAGCRAKAKFRQRILSLLYKTTLLSRLDPDDVVEKTNFEVVFQMNTSLGRKADRSLDINVHGKSDNWTTAEDKMLLQLVTKYGSHKWEKIAKEIRTHSSDNCRARFFIISERPMDKSIANLREVPQQNLMKIQENESHLRRVIDPKKEFYRFRLRNNELIWYNILKYAYDFSYFKSFSRVTNSIVALNFVKSALSVYLQPPVALQKPYCSGAVRLNIEKLVRAQFEDDSSEVAKQQEYKLPPSYCTLLGFRGLCILTSSCIEQTSSPSNDLEAGRRAKEKFRQRLLTLLYNTALLSRLDPDDVVEKTNFEVVFDPNTSFGRAASISLAELRVSQTNSIAENIVKASRKAKRTLNTSEHSPVKKIKEVDME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-