Eaen014120.1
Basic Information
- Insect
- Eristalinus aeneus
- Gene Symbol
- Clic
- Assembly
- GCA_955652365.1
- Location
- OY019132.1:27330926-27348013[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-14 1.2e-10 41.6 0.1 4 42 138 177 135 180 0.91 2 3 0.13 3.7e+02 1.6 0.1 18 37 199 218 191 224 0.80 3 3 1.6e-08 4.7e-05 23.7 0.0 7 39 251 283 248 287 0.86
Sequence Information
- Coding Sequence
- ATGGTGTGCTGTGACGCCAATACCGTGAGAAGAGCGAAATATTGTCGTTTGATAGTTGCGAAGGACGAAATAGAATGCGACGACGCCACCACTGAAATAGACACAAAACCCGCCGAAGAAACTCTGATACCGGTGGCGGCGGTTGTTGACCCGACTCACACGTCCTGCGAGCAATTCatcatttttgaattaaagaCTGACACAGAACCAATGTTCAATTATGTCATAAAGCAGGTCAAGACACCACCGCTCGATGATAGTATACCACCGCCAACAATACCCCCTGCCAACAACGAGTGCATTCAGCCTGAAGAAGCCAATAAAATCTGCGTACAGGAAACGAGTCCAAAGAAGGCTCGAGAAGAAACTAAAGAGAACTCCCGCAAAGCACAGCGAGTCCTGAACAGAAAACGGCTTGAAGAAGCTCTGGAAGCGGTCGTTAGCAGACAAATGACTATTAACAAAGCGGCTAGCGTCTACCAAGTGACCAAAAGCACACTCTGGAAGGAGGTAAACAAGCGCACAGATCACCGCAAGAAAGTTGTAAACGAGGAACTCAATCGAAAAATCGCGAAACGAATATGCTCTGGCGAGtctctttcgaaaatttctcgAACGCTGAAAGTAGCCAAATCCACACTTCACCAGCACAAGGTACGATTGGCTCAGAGCGGCCAACTCCCGTCCAATGTGACACTGAAACCGCCTGTAAACCCTGAGGAAAGGCTGGCCGTGAAAAAGCGCGTTATCGAAGCATTTCGTGGTTGCCAGGTGAATGGGATGTCCATACGACTAGCGGCGAAATTCTTTTCAATATCACCCACAACTCTGTGGAGACACATTCAACAGTACAAGAGCCAACACGGTGGCACAATAAGTGGTCGCAGTGAACAACAGAGCGCTGAAGTTGAaccagaagaagaggaagagacTGAAACAGATGGGGACTCTGAATCGAGTGCAGAAGATGATACGAATTCACAGGCGTCCAAAGCGAGCAGCAACTGCGCGGAAGACGAGAGTACCACCAGCGAAATTGATGATTTTCTGATAAGTTTTGACTTTGAAACGTTTGAGGAGTTCATTAAACAAGAGTTGGAGAGATCGACGTATAACGCGTCCACGATCGATGGAAGACGAAAGGGAGCATGTCTGTTTTGCCAGGAATATTTCATGGACCTGTATCTGTTGGCCGAATTGAAAACAATTAGTTTGAAGgtCACAACAGTTGACATGCAGAAACCACCACCAGATTTCCGCACCAACTTTGAGGCTACACATCCGCCAATTCTCATTGACAATGGTCTCGCAATTTTAGAGAACGATAAAATCGAAAGGCACATCATGAAGAATATCCCCGGAGGATATAATCTCTTCGTTCAGGACAAAGAGGTTGCCACTCTTATTGAAAACCTGTACTCCAAACTGAAGCTGATGCTTGTAAAGAAGGACGAACATAAGAATAACGCCTTGTTGtcacatttaaagaaaattaacgaTCATCTAGCATCACGTGGAACACGTTTCCTCACTGGTGATACAATGTGTTGCTTCGATTGTGAGCTCATGCCAAGGCTACAACATATTCGAGTGGCTGGAAAGTATTTTGTTGACTTCGAAATACCCACTCACCTGACAGATTTGTGGCGTTACATGTATCACATGTATCAGTTAGATGCCTTCACGCAATCCTGCCCAGCGGATCAGGATATTATCAATCATTACAAATTGCAACAGATGCTCAAAATGAAGAAACACGAGGAACTGGAGACGCCAACATTCACAACGTCGATTCCAATTGATATTTCAGATTAA
- Protein Sequence
- MVCCDANTVRRAKYCRLIVAKDEIECDDATTEIDTKPAEETLIPVAAVVDPTHTSCEQFIIFELKTDTEPMFNYVIKQVKTPPLDDSIPPPTIPPANNECIQPEEANKICVQETSPKKAREETKENSRKAQRVLNRKRLEEALEAVVSRQMTINKAASVYQVTKSTLWKEVNKRTDHRKKVVNEELNRKIAKRICSGESLSKISRTLKVAKSTLHQHKVRLAQSGQLPSNVTLKPPVNPEERLAVKKRVIEAFRGCQVNGMSIRLAAKFFSISPTTLWRHIQQYKSQHGGTISGRSEQQSAEVEPEEEEETETDGDSESSAEDDTNSQASKASSNCAEDESTTSEIDDFLISFDFETFEEFIKQELERSTYNASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENDKIERHIMKNIPGGYNLFVQDKEVATLIENLYSKLKLMLVKKDEHKNNALLSHLKKINDHLASRGTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTDLWRYMYHMYQLDAFTQSCPADQDIINHYKLQQMLKMKKHEELETPTFTTSIPIDISD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -