Basic Information

Gene Symbol
Xbp1
Assembly
GCA_955652365.1
Location
OY019131.1:94028353-94029705[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3 4.3e+03 -1.5 0.1 14 24 42 52 40 54 0.72
2 2 7e-16 1.3e-12 48.2 22.2 2 65 58 135 58 135 0.98

Sequence Information

Coding Sequence
ATGAATACTCCAGTTTTTATAACCGTTCCAAAGTACGTTGCAATAACACCTAACCCCTTGACCAGGGTCACAGCCATGGAGGTGAACTCCAATTGTGAGAGTTCCACCTCCTCTTCGGAAGAAATTAGTGCATGCCGGGGAAAGAAACGACGTTTGGACCATCTATCATGGGAGGAAAAGCTGCAGAGAAAAAAATTGAAGAACAGAGTAGCAGCACAAACATCTCGTGATCGTAAAAAAGCCCGCATGGAAGAAATGGAGCAGACCGTTATTGAACTCACCGAAAAGacagaaattttacaaaacaaatgcGATAGCCTCCAAGCCATCAATGACTCACTCTTGGAGAAAAACCAGAAGCTAGATAAGGAAGTCGAGCAACTCAAGCAGCAATTACAGCAATTGCAAAGCAGCACACAACGCAGTAgcgcacaacaacaacagcaagagTCGTTGAATTGGAATGAAGGAATCAAAATCACTGACACAAAGCGACAAGCGCACGCGCCAGTCAGCCTTCAGCGAGAGCTCAGTTGCAGCGCTCTGGAAGATTGTAGCGCTTTGCCTTCTCTACAAGACATGCTCGAAGATTTCGACGCCACTAAACTGGAAGAGCTTGCCGAAAGCCTACTCGCAGATATCACTGCAGACATGGAAGGAAGCCATCCAGAGAGCCACGGAGAAGCTGCCCAAGATGCAGGCATCGCAGAGCGACTGTCTGGATCAGTGGTGGGGACCACACCAGAAGTCATGGAATCCAGCCAACATAGCAGCAACAATATCAGCATAAGCACCATCGCCCCATCACTGGGAAACACAACAGACGCGCCCCTTGACGCGGGCGAGACTATCTACGGGACCTATGACGAGAAGACAAATTCCATAACGATAGTAGTAGGCGATGATGCTATCGCCATGAACGAGGCGGTTGAAGAGGTGTACTGCGAGGGCGAGGAACCAAGACACGAAGAAGGCGTCATAGAGTGTGGCGTGACATCCGATGACGTGGGTGATGATGACGAGGACTTTGATCCCATTGAGAAGTTCTTGTCCCTGCCCACCGATACGAGGAAGAGTTGCGTCAAGAGCCCTCTGTCAATACATTCCTACTCAGACCCGGGATATGAATCAATCGGCTCACCACAGAGCGACATTGGAAGCACGATATCGACGTTTGACGAGATGGCGTGGAATAACAGTATAAATGACCTGTTCCCGTCGCTGCTGTAG
Protein Sequence
MNTPVFITVPKYVAITPNPLTRVTAMEVNSNCESSTSSSEEISACRGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKARMEEMEQTVIELTEKTEILQNKCDSLQAINDSLLEKNQKLDKEVEQLKQQLQQLQSSTQRSSAQQQQQESLNWNEGIKITDTKRQAHAPVSLQRELSCSALEDCSALPSLQDMLEDFDATKLEELAESLLADITADMEGSHPESHGEAAQDAGIAERLSGSVVGTTPEVMESSQHSSNNISISTIAPSLGNTTDAPLDAGETIYGTYDEKTNSITIVVGDDAIAMNEAVEEVYCEGEEPRHEEGVIECGVTSDDVGDDDEDFDPIEKFLSLPTDTRKSCVKSPLSIHSYSDPGYESIGSPQSDIGSTISTFDEMAWNNSINDLFPSLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223128;
90% Identity
iTF_00671357;
80% Identity
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