Basic Information

Insect: Eriosoma lanigerum
Gene Symbol: L_1
Assembly: GCA_013282895.1
Location: scaffold:43544861-43555402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.49 66 4.9 0.3 11 23 113 125 109 125 0.82

2 19 7.2e-06 0.00097 20.1 0.9 1 23 131 153 131 154 0.96

3 19 0.00011 0.015 16.4 2.0 1 23 171 193 171 194 0.96

4 19 0.44 59 5.0 0.6 1 23 218 241 218 241 0.94

5 19 3.8 5e+02 2.1 0.6 1 23 279 302 279 302 0.93

6 19 0.0011 0.15 13.2 1.2 2 23 479 500 478 500 0.94

7 19 0.00095 0.13 13.4 2.7 1 23 508 531 508 531 0.95

8 19 0.00016 0.021 15.9 0.6 1 23 536 559 536 559 0.95

9 19 0.00053 0.071 14.2 0.8 2 23 609 630 608 630 0.96

10 19 0.067 9 7.6 3.6 1 23 634 656 634 657 0.96

11 19 0.88 1.2e+02 4.1 0.4 3 23 701 723 700 723 0.86

12 19 0.00098 0.13 13.4 4.6 2 23 737 758 736 758 0.96

13 19 0.0022 0.3 12.3 0.3 1 23 768 790 768 790 0.98

14 19 0.19 25 6.2 1.5 2 23 798 819 797 819 0.97

15 19 1.7e-05 0.0022 18.9 1.0 2 23 903 925 903 925 0.97

16 19 0.11 15 6.9 1.3 1 23 929 951 929 951 0.97

17 19 0.15 20 6.5 0.0 2 23 963 984 962 984 0.95

18 19 0.0097 1.3 10.2 0.1 1 23 992 1015 992 1015 0.96

19 19 0.67 90 4.4 0.3 1 23 1022 1046 1022 1046 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.49	66	4.9	0.3	11	23	113	125	109	125	0.82
2	19	7.2e-06	0.00097	20.1	0.9	1	23	131	153	131	154	0.96
3	19	0.00011	0.015	16.4	2.0	1	23	171	193	171	194	0.96
4	19	0.44	59	5.0	0.6	1	23	218	241	218	241	0.94
5	19	3.8	5e+02	2.1	0.6	1	23	279	302	279	302	0.93
6	19	0.0011	0.15	13.2	1.2	2	23	479	500	478	500	0.94
7	19	0.00095	0.13	13.4	2.7	1	23	508	531	508	531	0.95
8	19	0.00016	0.021	15.9	0.6	1	23	536	559	536	559	0.95
9	19	0.00053	0.071	14.2	0.8	2	23	609	630	608	630	0.96
10	19	0.067	9	7.6	3.6	1	23	634	656	634	657	0.96
11	19	0.88	1.2e+02	4.1	0.4	3	23	701	723	700	723	0.86
12	19	0.00098	0.13	13.4	4.6	2	23	737	758	736	758	0.96
13	19	0.0022	0.3	12.3	0.3	1	23	768	790	768	790	0.98
14	19	0.19	25	6.2	1.5	2	23	798	819	797	819	0.97
15	19	1.7e-05	0.0022	18.9	1.0	2	23	903	925	903	925	0.97
16	19	0.11	15	6.9	1.3	1	23	929	951	929	951	0.97
17	19	0.15	20	6.5	0.0	2	23	963	984	962	984	0.95
18	19	0.0097	1.3	10.2	0.1	1	23	992	1015	992	1015	0.96
19	19	0.67	90	4.4	0.3	1	23	1022	1046	1022	1046	0.94

Sequence Information

Coding Sequence: ATGCATTATTGTTTTATATTTATATATCGTTTGCGTCGTTTTCGGAGTCGTTTTACTTATTTGTCGGACGCGGTTCACCGGACAGCGCGTGCCCAGAATCCGCGGCGCGCGGCTGTCGGCGTTGACCGAAAACAGAAAAAAAGTACGTCGACGCTGCCGCGAACCGTGTCGCACCTGCTGCGAGAACGATGCGACAGGTCTCGCCCACCCAAAAAATGTCATGCAAACGTGCTCCAGAATACAATGCCAAAGAATATTATCGTCGGCGCTCGCGCGCGTATGGTATGTGCTAACAAACTATTGTGTGCCACCGTCGCCACCGCCAAATGGACGTGTGGTCGCGGCGATCACTTAAAGATTCACATGAAAACGCATGACAATCAAAAACCGTTCCAATGTACGGTGTGCAACAGGGGTTACAGTACGGCGGCCGCACTTACATCGCACATGCAAAACCATCACAAACGGGCTGCGGAACGCGCCAACTCGCCGCAAATATCCGGCCCGTCGTACAAATGCCTGCAGTGCACGCAGATCTTCCGTAAACCAGACGAGTTACAGAATCATACCGCGACGCACCATCTCGGAGAACAATTGTCGTCAAATTCTCGAAGTTCAAAACGATCGACGCCTCCGAAAACGCCAAACCAATATATGTGCATGTATTGCAGCAAAGAAATGGCCAGTATGGACGCATTACAGCAACATTTTCAGAATAAACACTCCGCAATTGTGAACGGTAAACCTCAGGAGGATATGTTCTCGGTCCTACCGTCCGCCGCTGCATTCCCATGGCTTAATTTTTCCGATTCGCCTGCTTTGGCCCTGCCACCATATTCATGTCGCATGTGCATGAGCCAATTCCCGTCCGTAATTTCACTGCAAAAGCACTTTACAACCGCTCATTATCTTAATTCCGTCCTCAACAATAACATCCAAAATAACAACAATAACAACAACAATGATAATAACACCAACAACAACAACGGATGTAAAATGAGTACCGGCTCGATGCAATCGTTTAGTTGGCCGTTGTTAACAAATGGATATCATCATTCAACATCGGGTGACGACGTCAGTAACATTGGTTTCTTACCAGATGACGCTATTCAGACCGGTCCCACTGATTTGTCTGTGTCATCGTCCAAACACTGTAACAGTAGTGGTGGTGGTGGTAAGCATCACTCGCCTTCGTCGGGCAAACACAAGTCCGTGGATGATTCGCGAAACCATGGAAACAATAAAAAGTCCCGTTCGTCACCTGGTCATGAACTTGCTGCACAACATCATGCGGCCGAGCAGCGTTCTACAAAACTTGAACGTAGCACGTATGACGGCAAACATCACCAACCGTACCACAATAACGTGCAACAACTGCAGCACGCGTCTTGGTCATCCGTAGTTACAGGCGGAACCAGCAACAAGATCCAATTGCCCTGTCCACACTGTCAAATCACGTTCACGCACTTTGAGGATTACCAACAGCACGTTATCGGTCACTTCCTAACGGCCGCCGCTGAATACGCATGCCAAAAATGTTCCACCACGTTCACCACGACAGAACATGTACAAAAACACCTAATGGAAACACATGCTCAAAACTTTTACCGATGCATGCTGTGTAAAGAGGTGTTCCCAACCAAATCTGCTCTAAAGATACACTTTAGCATGAACCACGGCAGCGAACACCGGATGTTCCGATGTAACAACTGTACAGGAGTATCCAGACCACTGTTCCAAACGGAAATTGAATTCATTGATCATCTGAGGAACACCCATTATTCTGCGAGATCGCCACCGTCTACCCAAACCAATCTAATGTTAAGATGTTTAGTATGTCACGCTACGTTTAACACACAATCTGACATGGAACAACATTTAGCTAGTCATTCCAAACAATTCCAATGCCAATTTTGTTCGGAAGCGTTCCATATCGAGTTTTTGTTAGATAGACACATACAAACGCATCATAGTTCTGCAATTCTAAGTCATCTTAACCGGAATCATAGGCAGTCCCCTAACACTATATGTACATCACCTACGTACATGTCTAGATCGATTGATGGTGGTAAACATCCGATGGAAAACGGAACAAATGTGTGTGATATATGCGAAAAAAATGATTTTCGGAACGAACTCGACTTGATCACCCACAAAAGAACAACGCATCAAATTAAACCTACGAATCTCTCGACGAAGGTGAGCTTACATTGTGCGTATTGTAATGAAAATTGCAAATCGAGAACAGAATTGGAAAACCACATGAAGACTCATTCACAACATGGTCTTAATGTCGGAAAACACAAGTGTAACATTTGCGATGAAATTTATCAATCTGCTATCAGTTTAGCTGAACATAAACTCACCCACTGTAAGGTAGCAACAAGTACGGTATGCAGTCACTGCAAAATGATTATCGATAACGAAGATCAATTTTATCAGCACCTCCAAAAACACTGCAATCCTGTGAACGTTAACGGCAGCCAAATAGCATTCCCTACATCGTGTATCATATGTAGACAAACACTGGTGTCGGACATAGAAGTCAAAGTGCATGTGCATTATCATTTGTCCCGAATCAAAGAGCCATCGACGCCGACAGTGGCGTCGACAACCACATGTACTAATTGCAACAGATATAAATTATCACCGTCTTCGCCATGCACAGGATGCAATCTTGGCAGGAATTCTACGGCGGCCATGGAACGATGTCCTGACTGCGGTACAACATTTGAAACATTCGGTTCACTACAACACCATTTAACCACCATTCATAGAAAACCTTTTCACTGTTTTAAATGCAAGATCGGATTCGAATCGCAACAAGAAGCCACGATCCATCTCGGTACTCATTTGGCTACGTTGAACGGTTCCGTGGACGGTATCGAGTGCGGCCTGTGTCCGTGCGTTTTGCCAACTGCCAACGGTCTTCAAACGCACTTAATCGAGCACACGTTCGCCGGCTGTAAGGCATTCACGTGCTACTTGTGCTCAGCTATATTCACTGCACCCACCGGACTTCAGTCACACATGACTGTGGATCATTCGGGCGAGACACCACCGTACGATTGTCCCAGGCCCAACTGTCAGGCCAAATTTTTCTTCACTGCCGAACTTGATCGGCATACGCTGGAACACCAAGGACAGGACGTGCTTGCAAACATGAACTTCTATAAATACCAAAACAAACTGATTTCCATATGTGAAAAGATGTCGTTCAAGTGTACTGAGTGTTACCAAAGCTTTTTGACACATTCCGATTTACAGTGTCACGTGTATGAGCACCATCGGGTACAGCTTGAACCACCGCTGCCGCCGCCATGCCGAGACACCAAAAAATGCGTGAAACAAGAACCCACAACTGTAAGTGATGCAAACAGTGATGAAGAACGACACAACGAAAATGCCACTGAGAAACCGATAAAGGCAGAAAAGCAGAACGAGGTAAATGTGAAAACGGAACACCGCGAGAAAGAAGACGAAGACGAGGAACTGATCGATGTGGGCGTCAACAATCGCATATGCGAAAAATTGTCCACTGATGACACACGTTGA
Protein Sequence: MHYCFIFIYRLRRFRSRFTYLSDAVHRTARAQNPRRAAVGVDRKQKKSTSTLPRTVSHLLRERCDRSRPPKKCHANVLQNTMPKNIIVGARARMVCANKLLCATVATAKWTCGRGDHLKIHMKTHDNQKPFQCTVCNRGYSTAAALTSHMQNHHKRAAERANSPQISGPSYKCLQCTQIFRKPDELQNHTATHHLGEQLSSNSRSSKRSTPPKTPNQYMCMYCSKEMASMDALQQHFQNKHSAIVNGKPQEDMFSVLPSAAAFPWLNFSDSPALALPPYSCRMCMSQFPSVISLQKHFTTAHYLNSVLNNNIQNNNNNNNNDNNTNNNNGCKMSTGSMQSFSWPLLTNGYHHSTSGDDVSNIGFLPDDAIQTGPTDLSVSSSKHCNSSGGGGKHHSPSSGKHKSVDDSRNHGNNKKSRSSPGHELAAQHHAAEQRSTKLERSTYDGKHHQPYHNNVQQLQHASWSSVVTGGTSNKIQLPCPHCQITFTHFEDYQQHVIGHFLTAAAEYACQKCSTTFTTTEHVQKHLMETHAQNFYRCMLCKEVFPTKSALKIHFSMNHGSEHRMFRCNNCTGVSRPLFQTEIEFIDHLRNTHYSARSPPSTQTNLMLRCLVCHATFNTQSDMEQHLASHSKQFQCQFCSEAFHIEFLLDRHIQTHHSSAILSHLNRNHRQSPNTICTSPTYMSRSIDGGKHPMENGTNVCDICEKNDFRNELDLITHKRTTHQIKPTNLSTKVSLHCAYCNENCKSRTELENHMKTHSQHGLNVGKHKCNICDEIYQSAISLAEHKLTHCKVATSTVCSHCKMIIDNEDQFYQHLQKHCNPVNVNGSQIAFPTSCIICRQTLVSDIEVKVHVHYHLSRIKEPSTPTVASTTTCTNCNRYKLSPSSPCTGCNLGRNSTAAMERCPDCGTTFETFGSLQHHLTTIHRKPFHCFKCKIGFESQQEATIHLGTHLATLNGSVDGIECGLCPCVLPTANGLQTHLIEHTFAGCKAFTCYLCSAIFTAPTGLQSHMTVDHSGETPPYDCPRPNCQAKFFFTAELDRHTLEHQGQDVLANMNFYKYQNKLISICEKMSFKCTECYQSFLTHSDLQCHVYEHHRVQLEPPLPPPCRDTKKCVKQEPTTVSDANSDEERHNENATEKPIKAEKQNEVNVKTEHREKEDEDEELIDVGVNNRICEKLSTDDTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -