Elan001386.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- -
- Assembly
- GCA_013282895.1
- Location
- scaffold:32565912-32571275[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00026 0.034 15.2 0.5 1 22 54 75 54 75 0.96 2 23 0.13 17 6.7 0.3 2 23 87 107 86 107 0.93 3 23 0.065 8.7 7.6 1.3 1 23 139 161 139 161 0.95 4 23 0.1 14 7.0 1.1 1 17 195 211 195 216 0.88 5 23 3.4 4.5e+02 2.2 0.2 1 9 613 621 613 636 0.79 6 23 0.11 14 7.0 1.8 1 23 642 664 638 664 0.88 7 23 0.0054 0.72 11.0 2.4 3 23 741 762 740 762 0.97 8 23 7.8e-05 0.01 16.8 1.7 3 23 906 926 904 926 0.97 9 23 0.049 6.5 8.0 4.4 1 23 931 953 931 953 0.97 10 23 0.0021 0.28 12.4 1.6 3 23 1014 1034 1013 1034 0.98 11 23 0.00023 0.03 15.4 1.3 2 23 1040 1061 1039 1061 0.97 12 23 2e-05 0.0027 18.7 1.4 2 23 1111 1132 1110 1132 0.96 13 23 2.1 2.8e+02 2.9 3.1 2 23 1138 1159 1137 1159 0.88 14 23 1.2e-05 0.0015 19.4 2.2 3 23 1225 1245 1223 1245 0.97 15 23 1.3 1.7e+02 3.6 0.4 2 12 1251 1261 1250 1270 0.83 16 23 4.4e-05 0.0059 17.6 3.6 1 23 1331 1353 1331 1353 0.98 17 23 0.00011 0.015 16.4 4.3 1 23 1358 1380 1358 1380 0.98 18 23 0.55 73 4.7 1.2 1 20 1446 1465 1446 1467 0.90 19 23 7.4e-05 0.0098 16.9 0.7 1 23 1491 1514 1491 1514 0.95 20 23 5.3e-06 0.0007 20.5 0.6 1 23 1555 1578 1555 1578 0.96 21 23 0.0068 0.91 10.7 5.1 2 23 1586 1608 1585 1608 0.96 22 23 5.8e-05 0.0077 17.2 0.3 1 23 1629 1651 1629 1651 0.98 23 23 0.00026 0.035 15.2 0.1 1 23 1656 1679 1656 1679 0.97
Sequence Information
- Coding Sequence
- ATGGAAATTACAAAAGATACCGACCAAAACAAACAATTATCCTTGGAATATCAGGATAAATGTGATAGTAATTTCAACTGTGAAAACACCACTCTAAATTTGCATTCGAAAAAACATATGGAAAAACTTACAGAGAAAGCCCAAGTAAATTTTAATACTTTTAAATGTGAATTATGTGAAAAAAGCTTTAAGTTGAACATTGGCTTAAATAGACATGTTCGGAAATGTAAATTGAGGATTATTGCGTTAAATAAGTTGAAATGTAGCATTTGTAATATATTTATTGATAAAGCAAATTATAATGAACATGTAAAAACTCACGAGAATAATAGTACTGAAAAAAAGATTGATTTTACTTTAAATTTAAAATTGTGTAAATTAAATGGTGTTTGGAAAAGTAAACAAAATGTTGTTTACACATGTAACATTTGTTTTCAGAAATTTCACGCTGAAAGCGATTTGGTAGATCATAAAGAACTTCATGAGCAAAATGAACTTCAAATGCAATGTGGTGATTGTTTAATGTTTATAATTGATTCTGAATTTGCTGATCATATGCAACGAATGCATAGTAAATATGCATTTAAGTGTTTGGAATGTGACCTAAGCTTTGATAAAAAACAAAACTTAGATTGTCATCTACTTTATTGTACTAAAAGTTCTCGTAATATATGGAAAAAATTTCAAACAGTAGTAAAACGCGAAATTGATAGTGAAATTGACAATGAAGCACAAAAGACTGATTGCTTTATCAATTTAAGCAAATCAAAAGTTATATGTACAAATTTCAAAAACAATAATAGTATGGATCAGATAAATGCAGAGAATAGTAATGAATCGATTGTAGAAACTGCACCATGTAATGTAATGGATAACGAATGTAGTCAGAAATTGAATAAAGAAAAAAACAAATACATAAAAGTGGCAGAAAAAATTGATTCAACAAACAGTAATGAATCAATTGTAGAAAATATACCTCATAATTTAACGGTGTACAATTGTGGCATGAGTATAAAGAAAGAAAAGGGCTTATGCTCAAATGTAGTAGAAAGTGATGATTCAAATCAAGTAAATGAAACAGACATCAATTCATTTACAGTAGAAGAACCTATATCAAATAATCTAATGATGTATGATTATGGTATAAATATAAAGAAAGAAAAAGATCTCTGCACAAGTGTAACAGAAATTATTAACTCTGATGAAATGGATGCAACAAATGATAATAAATTAACTGTAGAAACTTCACCACACAATTTAATGGTTAACAATTGCGGTATAATTATTAAGAAAGAAAAGGGCCTACACACAAATAATACAGAAAATATTAGTTCTGATCAAATTAATACAACAGACAGCAATGAATATATCATTGAAACTGAACCACATAATTTAATGATAAACATTAAGAAAGAAAAAGATCTCTGCACTAATCTAATTGAATGTAATAATTCAGATCAAGTGAATTCAACAAACAATGATGAATTTACTAATGATATTATGCCATATAATTTACAAATAAATGATCACGTTGTAAATATAAAAAGAGAAAAAGGTCTTTGTACAAATTTAACAAATTCAAACAACTCATATCAAATAAATACATTGAACAATGATGTATTGAATATAGAAACTGCATCAACAAATTTTATGACAAACAATCATAATCAAAATATAAACACAAGAAAAATCTTACATACAAATAAGCCTACTAATTCAGCTAGTGAAAACATTGTGTGTGTAGAAAGTATTTATTTTTCTATTAGAAAATTACGTAATATTGAAAATACATCTTCTATTGTTAACTATGAACAAACAATGCAAAATAATGTAAAATTTATATGTAATATTTGTAACAAATCACCATCTACAGATATACACTCATTTGCATTACACATGAGTGATCATCGAGAGTGCAACTTGCATGAGTGTATTGTATGCGATAAAAAGTTTGAAAGTGTAAATCTTTGGACAAATCATATGTCCTATCATCAAGAACAAATAGATTTAATTTTTTCAAAATCTCAAAACAGTTCTAAAATTATTGAATCCAATATATTTACTGATACTAATTTAGGAAGCACAGAACCTCAATTACCTTTCATGACTTTAAGAAATAGAGAAAATAGGAGATCTTCTAAAACCTATTTTGAAATTGAAGATTATTATACAGATCCTGTGCTTGATATAAATAATAGCACAAAAAAATCAAAAAATCATTGTAATATTTGTAATATGATATTTCCCTCCAAACTGACATTAATAGCTCATCATAAAACTCTTCATAATAATCAGTTACAGTCATATTCCAGTAATTATTGCGATAAAAATAATTCCTCAGAAACTTCATCTACTAATCATGAAAATTTACATAGACAGAGTTACACAGCAAATACTTTTTCATCACTTAATACTACAAATAATATATATGAATCATTTAAAACACAACGCAACACAAATATTGCAATAACTAATGGTAATTCTATTTTAATTAATCCTGTAGAAATAAATAAACAAATTGTGTTTCCGAACATGCCTAAACAATTTTCTAAGCCAACTAATTTAAATAATGATCACATTAATGGTGAAGAATATGTAAATAAATCGAAAAAAACTAAGCGAACTGTAAAAGAACATTGTAAAAATCTATCAGTGTCTATTGGTAAAAAAATGAATAATTTTGTTGATAAAACCAAAGAGAAAAAAAAATCAATTTGCTCTATATGCAAGAAACAATTTGGACATCGTGGTGCGTTGTCCAATCATATGAGAAGTCATATTAACACTCAACACAAATGTCGATATTGTAGCAAAGAATTTAATTTAAAGAAGGAATATATTTTGCATGAAAAATCCCATAAATACATAAAAAAAATTAAAAGTGTTAACAATCTAAATTTTAATGAAATAAACATTGAAGTTAATGAAGATAAACAACAAAAAGAAAATTGTAATAATTCTTTATTTGTTAATAGTAAATTTAATGTCACTTCTACAGATACTAATTTAAATAATTTTGTTTATAATAAATCGTCATTTTGTTCTATATGCAAAATACAATTTGAACACAATGATGCCTTCTCCAATCATATGATAACTCATTCTGATCTACAGCTTAAATGTCAATATTGTGATAAAATATTTTATTTTAAAAAGGCTCTTATTTCACATGAAAAATCACATAATAATAATAATAATAAAAAGAAAATTAAAAATGCTAAAAATATAACATTTAATGAAATAAACATTGAATGTAATGAAGATGAACATCAAATAGAAAACTATAGAAATTCTTTATTTATCAATAAAACTATTAAACATAAATCATTAATTTGTAATGTATGCAAAAAACAATTTGCACATCGTGGTGCCTTATCCAATCATATGAGAAGTCATACTAATCTTCAAAACAAATGTCGATATTGTGAAAAAGTATTTAATTTGAAAAGGGCTTGTCTTTCCCATGAAAATTCTCATAGATACAATAAAAATATTAAAAATGTTAATAATATAAACTTAAATGACATAAATATTGAAGACAATAATGATAAACAACTAAGAGAAAATTGTGACTATTCTTTGTTTGTCAAAGACGAATATAACGACAGTCTTATAAATAAAAATTTGATGAATGATTTGGTTAATGAAACTATTAATGATAAATCATTATTTTGCTCTATATGTAAAAAAAAATTTGCACATCAAGGTGCATTGTCCAATCATATGAGAAGTCATACTAACCCTCAAAACAAATGTCGATATTGTGAAAAAGTATTTAATTTGAAAAGGGTTCGTATTTCACATGAAAAATGTCATAGATTCAATAAAAAAATTAAAAATGTTAATCTTGTAAACTTAAATGAAATACAATATAAAGACAATGAAGATATGCGACAAAAAGAAAACTGTAACTATTCTTTGTTACCTGGCAAACTCAATGATGGTACTATAAATAAAAATTTGGTGAATGAAACTATTAATGATAAATCTTTTATTTGCTCTATATGCAAAAAACAATTTAATCGTCATATTTCCTTATCCAATCATATGAGAAGTCATAATAATCAACGACACAAATGTAAATATTGTAATAAAGCATTTATAACCAAAAAGTCTTTTATTTCCCATGAAAAAATTCATAAACTTGGACAAAAAATAAAAAATATTAACAATATAAACTTTAATGAAGTAGACGTTGAAATTATTGAACATAAACAACAAAGAGGAAACTATGATAACTCTGATAATATTGAATTTATTAATGGTCAAAATCGTACACATTTGGCAAAGAAAGATCATATTTGGTTTGCCTGTGATGTATGTGAAAAAAACCCTTTTAAATGTGGATATTGTAAAAAAGAATATCACTTAATAAACGACTGGAAAAAACATTTGTCATTAAGCAAAGAATGTTGTCGTCATTATAATAATACCTGTCCAGTGTCATTACAAGTCAAAGAAACTCAAAGATATGAGTGTAACATTTGCAAAAAAACATATAGCAGCTTATACAATCGAAAAGTGCATATACAAGCTATTCATAAAAAATTAACTAATACAAATAAAGATATAGGAAACAAACAATTAACAACAATAGAAAATATCCAACAAATGCCAAACATTTCTAATCAAAGACAACGTCAAATATCAAAAGATACTAATTACTCTTGCAACTTATGTGGTAAATATTACAGTAATAGTGCTAATTTAAGTCGACACCAAACCATTATCCATGGAATGAATAATAAACCTATTAAATGCCAAGTTTGTAAACGGATATTTAAACATAAATATACTTATCAAACACATTTCCTAACGAAACACAAAAAGTTTTTAAATAATGGCAAAATAACTGTTAATAAAAATAATTTAATGAATTTGAGATATAAATGCCTTATTTGTAAAACAAAATTTGCTGATAATATTGCATTACAAAAACATTTACTTATACATACTACAAATCAATATCCATGTAAAGACTGTGGTCAGCAGTTTGAAACAAATGTTACTCTAGGTGAGCATATTTTAAAAAACCACAATACCAATTAA
- Protein Sequence
- MEITKDTDQNKQLSLEYQDKCDSNFNCENTTLNLHSKKHMEKLTEKAQVNFNTFKCELCEKSFKLNIGLNRHVRKCKLRIIALNKLKCSICNIFIDKANYNEHVKTHENNSTEKKIDFTLNLKLCKLNGVWKSKQNVVYTCNICFQKFHAESDLVDHKELHEQNELQMQCGDCLMFIIDSEFADHMQRMHSKYAFKCLECDLSFDKKQNLDCHLLYCTKSSRNIWKKFQTVVKREIDSEIDNEAQKTDCFINLSKSKVICTNFKNNNSMDQINAENSNESIVETAPCNVMDNECSQKLNKEKNKYIKVAEKIDSTNSNESIVENIPHNLTVYNCGMSIKKEKGLCSNVVESDDSNQVNETDINSFTVEEPISNNLMMYDYGINIKKEKDLCTSVTEIINSDEMDATNDNKLTVETSPHNLMVNNCGIIIKKEKGLHTNNTENISSDQINTTDSNEYIIETEPHNLMINIKKEKDLCTNLIECNNSDQVNSTNNDEFTNDIMPYNLQINDHVVNIKREKGLCTNLTNSNNSYQINTLNNDVLNIETASTNFMTNNHNQNINTRKILHTNKPTNSASENIVCVESIYFSIRKLRNIENTSSIVNYEQTMQNNVKFICNICNKSPSTDIHSFALHMSDHRECNLHECIVCDKKFESVNLWTNHMSYHQEQIDLIFSKSQNSSKIIESNIFTDTNLGSTEPQLPFMTLRNRENRRSSKTYFEIEDYYTDPVLDINNSTKKSKNHCNICNMIFPSKLTLIAHHKTLHNNQLQSYSSNYCDKNNSSETSSTNHENLHRQSYTANTFSSLNTTNNIYESFKTQRNTNIAITNGNSILINPVEINKQIVFPNMPKQFSKPTNLNNDHINGEEYVNKSKKTKRTVKEHCKNLSVSIGKKMNNFVDKTKEKKKSICSICKKQFGHRGALSNHMRSHINTQHKCRYCSKEFNLKKEYILHEKSHKYIKKIKSVNNLNFNEINIEVNEDKQQKENCNNSLFVNSKFNVTSTDTNLNNFVYNKSSFCSICKIQFEHNDAFSNHMITHSDLQLKCQYCDKIFYFKKALISHEKSHNNNNNKKKIKNAKNITFNEINIECNEDEHQIENYRNSLFINKTIKHKSLICNVCKKQFAHRGALSNHMRSHTNLQNKCRYCEKVFNLKRACLSHENSHRYNKNIKNVNNINLNDINIEDNNDKQLRENCDYSLFVKDEYNDSLINKNLMNDLVNETINDKSLFCSICKKKFAHQGALSNHMRSHTNPQNKCRYCEKVFNLKRVRISHEKCHRFNKKIKNVNLVNLNEIQYKDNEDMRQKENCNYSLLPGKLNDGTINKNLVNETINDKSFICSICKKQFNRHISLSNHMRSHNNQRHKCKYCNKAFITKKSFISHEKIHKLGQKIKNINNINFNEVDVEIIEHKQQRGNYDNSDNIEFINGQNRTHLAKKDHIWFACDVCEKNPFKCGYCKKEYHLINDWKKHLSLSKECCRHYNNTCPVSLQVKETQRYECNICKKTYSSLYNRKVHIQAIHKKLTNTNKDIGNKQLTTIENIQQMPNISNQRQRQISKDTNYSCNLCGKYYSNSANLSRHQTIIHGMNNKPIKCQVCKRIFKHKYTYQTHFLTKHKKFLNNGKITVNKNNLMNLRYKCLICKTKFADNIALQKHLLIHTTNQYPCKDCGQQFETNVTLGEHILKNHNTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -