Basic Information

Gene Symbol
NCOR1
Assembly
GCA_013282895.1
Location
scaffold:25211834-25226202[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-07 0.0005 20.7 0.0 4 43 490 529 488 531 0.98
2 2 4.5e-14 9e-11 42.3 0.1 4 44 834 875 832 877 0.96

Sequence Information

Coding Sequence
ATGGAAGCCGTACAACAAACGGTAATACATCTGGACCGTGCTGCCATGCCTTCACAAGCTCAAATGGCTTATTCTCAAAGGAATCCTCAAATTCATGGAAGAAATGTTAACCATGGTGTAGTTCAAGTAACCGGAGAAAATGGATCTTACAAGCCATCCTCTGCTGGTACTGGTCAAGTGCATAATAACTTTGTTGGGTACCCACCTAATATAAGATATGTCTCTCAACCTGTATACATGTCGGCTACAACCTCAGCATCAAATGCATATAGAGATGCATCTTTCCACTCTAGAGCATTAAATATACCTGATAGAGGAGTTACAATAGGTGTTCCTTTTGAGTTAGCAAGAACTGATATGATGCCTACTGTATCGAGACCAAATCGTATATCTTTGTTGTCAGCAACAAGTGATTATTACCAACGGAGTCGTTTACAAATGGAACATTATCGAGATGAATCATTGAACCACAATTCTCACAATACAGTTTCTATGAACTTCATGAGAGAACGACCGGATCATGGTCCTCCACCACCTTTGAAAAAGCCTAAATTACTTCATCCAATTTCACCTCAACCACCTCTTAAAATTGATATTTCTGATCCCCCTTCCACGAGTGCATACAACCCTCAAGTAGAAGCTATTTCACCTACTATTGATGAACCAGTGCCAGAATATAAGAAAGTTAATGATGTTGCTCCGAAAATAAATAAACTTGAGAGTCAAATAAGTAGTATCTCACATGAAATTGATGAATTAATAAAATTAAAAGAAAATTATGAACAAAATGAGTTAAATTCAGAAGCTATTAAAGAAGAACCTGTAGAAGATACTAAAAATGAAAGTGAAGAAGAAGATCCTATGAAGCATTTGACTCCTGTGCAAAGAATTTATGCATCAAACAGAAAAAAAGCATATGACTCAAGAATGAGTTTAGATAAATTTGCCAACAAAACAGATCTTCCCTTGTATAACCAACCATCAGATGCTGATATCTATCATGAAAATCGAAGAAAATATTCATTTTTCAAGTCCAGACTATTGGAGCATCTAAGGAAGAAGAAAAAGGAACAACTGCAAAAAAAAACCGACATTTCTGAAACATATGTCAAATTGCATAAAGATTGGATACGTAGAGTGGATAAAATTGATAATTCACAAAAGAGAAAAGCAAAAGAAGCTAAACACAGGGAAATGTTTGAAAAAGTTTTCCCAGAATTGAGAAAAGCACGCGAAGATAAAGAAAGATTTAATAGAGTAGGTGCTCGAATAAAAAGTGAAGCAGATTTAGAAGAGATTATGGACGGTTTACAAGAACAAGAGTTGGAAGAAAAAAAAATGAGATCATATTCTGTTGTTCCACCTCTTATGTTAGACCCGCATGAACGGCATTTAACTTACTTAAATAACAACGGACTTGTGATAGATTATAAAACAGAATACAATGAAAGAAAATATGTGAATATATGGACACAGCAAGAAAAAGATGTGTTTAAAGATCGGTTTATTGCCCATCCTAAGAATTTTGGTGCAATTGCTTCTTATCTTGATAAAAAATGTCCTTCTGATTGTGTACAGTATTATTATTTGAGCAAGCCTAAAGAAGAGTACAAAAGACTATTACGAAAAGCTAAATGGCAAGCAAGACGCCGTACTGCTCAAAATCGAACACCTGCTAGTTCATTGAATTCATTAGATATTTTAAATTCAACTTCAATTGGAGTGACAACTAGACTACAAAGAGAACGTCAAGGTAGTGAAGCTGCATCATCAAATTTAGTACAAGCTTCTTCAGCAGCTCAAAATGTAATACCTGAAAGTGAAGAGGCTTCTGCACCTGCAGAAGTATCTGTTGTTACCGAACAAGGAACAAATATTGAAATGGAAAATATACAAAATAGTAAAGAACCAAGTAAAGAGTCTGCTAAAAAGTTGATAGCATCATCTGTTACACCCCATACAAGTGAACTCAAATCTGAATCAAAAAAGAAAGAACGACGAAAAGATGATAAACTAAAAGGAGAAAATACGAGTACAACTGATGAAGAATTAATGGATTCTCAAAATGAAACTGGATCAAAAGGAGAAATACCTAAAGGCATTTGTGCTGTTTGTAAAGCAGAAAATGTAGCATGTCCCAGGACTCTAAATATTTCTGATGCAGCTCAATATGGTGTGAAACCAGAAGATATTACTCCTGGAGCTAGGGTGTGTAATACTTGTCGTTGCAAAGTTGTTAGATCACAAAATCGCCGCGTAATATATTGTTCATTACCTTCATGTCCCACTGTTCAATCCAATAGTAGGAGACCAGTTAAACGATTACGTCCATTACCAGCTAAATGGAATACTGCTCAAGATATTATTGCTTCAGAATTTCAAATTGGTCCTACAACGACAAAGTGCTGTTCAGCTTGTTTTAATCGTATACAAAGACGATTAATGGCACTTGGTGTAGTAGGAACATCAAACAATATGAATACTGATTCATTGGATGGATGGACTGATGAGGAAACTAATGCATTAAAAAAAGGAATCCGTGAGCATGGTACTCGTTGGAGTGAAATAAGCAAATTAGTAGGACCAAACAAAAGTCATTATCAGTGTAAAGAGTTTTATTTTAGCTTCAGGAAAAAACTTGGTCTAGACCTCTTAGTACAGGAGTATAAAAAGACAAATGGTGGTGAACAAAAACCTGCTTTAACAGACGAAGAAGAGTCTGGATCAAGTACTTCAAGCTGTGATGAGACTAACCTTGTATTATGCGATAGTGATACTCAAAGTGCACCTTCACCAACAAATACTTTACCACAAACTTCTCCTATGCGAGAAATTACTAGCCCATCACAATCAAAATTGAAAGAATTACGGGTAGATAATGAAAATACTATTCGGTCAACTGTAGTTAAAGAAGATTATGATAGTTCGGCTACTGAAACAGCAGATGAAGGTATTGGAGGTACAGCTGATAATGAATCAAATGTGTTACAACATTCCAATAATGAAAATGAGAAAAAAGAAAAAATTGTTACAGATTTAAGCGTGTCAGATATTTTATCTGATGTTATCGAAAAACAATTTACTAAAGAACATACTAATCGAGAGAAGGAGAATGGTTCTATGCCTACTATATCATCAATACTTTTAGATCCTGAATATCCAATTAAAGATAGAAATATTGCATCTATTAATAATGAAAATAAACAACAGTCTATGGCTACAATATCAGTTGTTCCACCACCTCCTCGGGAACTTCATAATAAAGATGGTTTAGTTGTGGTTCAAGTGCAATCTTCTAAATTGTCTGATGTTAGAGTTCCTGAGGGTGTAACTCTTGATTTGAGTATAAAAAGACCAAGAGAAGGAGATTCTTATTCAGATCCACCTCCTATTAAGCATGCACAACCACCACCACCACCTGGTGCAATGTATAGATTGCCTCCTACACAAATTCATGAGACAAATACATTTTATTCGCCGCAGTATGCTGAATTGGGACGAAGTGGCAAACAAGGTGAAATATATTGGACAAAAATACCATCTTCAAATAATCATGCCATGGTTCATCAACCACAATCTGTACCACATGTAACTGTTAAACAAACATCACATATAAAATTACCAAATAAGGTAACATCACCACAGTTATCTGTTGCAAATACTGTTTCTTCAAAGTTATCTCCAAATATATTAAATAACTCAAAAGCCACTGGCTCCATCATGCATGGTACTCCTGTTTCAGTTGCGACTCTATATATGCCACCACAATCTAATCGTTATTCTCAGTCAGGACAAACACCCGGTGGTTCCATTACTCAAGGTACTCCTGTACAGCAACGTATGTTACATAATTCCAATCCAAATATAAATACAGATTATTATCAAAAACGAAATCCACAACCTCAGTATCAATCAAGACAGCCACATTATAGTGAACAACGACAAATTATTATGAATGACTATATTACTTCTCAGCAGATGCATTCTAATGTGACTACTCAATTTCCTCGAGCACAAAAACCTCCAGTTACAAGTCCCATGTACTATCAACCAACTCGTCAAGGTGTAATACAACGACATAACACTGCTCCGAAAGCAACATCTCCACAAAGTTATCCTCCAGGACATGAAGCACTAGGATCTTTAGTTGATGTAGCAATTCGACAGCCTAGTCTACCAGTGCCTTTAAACCATTCAGAAGATAGGCATAGAGAACAAGATCGTTATGTAAGAGGATCTCCTGTACCAAAACCTCATAATATGTTTAGAGAACAACAGAGACATGAGCAAATGCAAAGAGAGCGTGAAATGGCAGTACAGAGGGAATTGCAAGCAGTGGCACAAATTAGGGAACAACAACAAAGAGATCAGTATCTAAGAGATAAACAAATGATGCATCATCGACTTACTCCTGAACAACATTCAAGAATGGTAGCAGCCTCATTTCAACAGCAACATCAGCACCAGCAAGAACAACCTAGATCAATGCAAATACCATCTACAGTTTCATCATTTCAACAATCTAGATCAAACACACCTGTAACTAGACATCAAGAACCATCATCCAACATACAAAGTAGAGATAATATTGCTAGTGGTAGAATTTCAAGACAAGGTATGGAATCACATGCATTAACTGCAGCCAACCTAATTGATGCTATTATTACACATCAAATAAATCAAAGTAATGATGGAAGTGGACATCCTCCTAGTACTCCCAATCCAGTCAATAATCAATCACATGTTCAACAACAGCGAGCTGGTGATAAATTATTTCAAGCGTTCCCAGAAGCAAATGAAAAACCAAATTTAAAACCACGAGCAAGTCCTGAAATTAATAGTCGTCCAAGTGAACCATATCCTCCAGAACATTCTTTTAAAGGATATCCATCTTATATGTTAGCTGCAGGTTTTGAACCTAATACTTGGAAATTACGTCGTGCTTTACAACAAAAAGAGTTTGAACAACAAATGAAAGATGATAATAATCGAGTTCGTTTTTATCCAACACAAGCTGATATACCTTTATCACCACTTGATTATGTAAAAAATAGGATTGTTGAAGTCATGCGTACTTCTGACGATGACAACAAAAATGAACAGGCATATACTTATCCATTTTCAGCTGCAATTAATATGACTGCATCAGCAACACAAAAGAATAATGAAACATCTGAGACAAGTGGAGGTGGATCTATGTTGACAGCCCAATATGAGCCAATGTCTGATGAAGATTAG
Protein Sequence
MEAVQQTVIHLDRAAMPSQAQMAYSQRNPQIHGRNVNHGVVQVTGENGSYKPSSAGTGQVHNNFVGYPPNIRYVSQPVYMSATTSASNAYRDASFHSRALNIPDRGVTIGVPFELARTDMMPTVSRPNRISLLSATSDYYQRSRLQMEHYRDESLNHNSHNTVSMNFMRERPDHGPPPPLKKPKLLHPISPQPPLKIDISDPPSTSAYNPQVEAISPTIDEPVPEYKKVNDVAPKINKLESQISSISHEIDELIKLKENYEQNELNSEAIKEEPVEDTKNESEEEDPMKHLTPVQRIYASNRKKAYDSRMSLDKFANKTDLPLYNQPSDADIYHENRRKYSFFKSRLLEHLRKKKKEQLQKKTDISETYVKLHKDWIRRVDKIDNSQKRKAKEAKHREMFEKVFPELRKAREDKERFNRVGARIKSEADLEEIMDGLQEQELEEKKMRSYSVVPPLMLDPHERHLTYLNNNGLVIDYKTEYNERKYVNIWTQQEKDVFKDRFIAHPKNFGAIASYLDKKCPSDCVQYYYLSKPKEEYKRLLRKAKWQARRRTAQNRTPASSLNSLDILNSTSIGVTTRLQRERQGSEAASSNLVQASSAAQNVIPESEEASAPAEVSVVTEQGTNIEMENIQNSKEPSKESAKKLIASSVTPHTSELKSESKKKERRKDDKLKGENTSTTDEELMDSQNETGSKGEIPKGICAVCKAENVACPRTLNISDAAQYGVKPEDITPGARVCNTCRCKVVRSQNRRVIYCSLPSCPTVQSNSRRPVKRLRPLPAKWNTAQDIIASEFQIGPTTTKCCSACFNRIQRRLMALGVVGTSNNMNTDSLDGWTDEETNALKKGIREHGTRWSEISKLVGPNKSHYQCKEFYFSFRKKLGLDLLVQEYKKTNGGEQKPALTDEEESGSSTSSCDETNLVLCDSDTQSAPSPTNTLPQTSPMREITSPSQSKLKELRVDNENTIRSTVVKEDYDSSATETADEGIGGTADNESNVLQHSNNENEKKEKIVTDLSVSDILSDVIEKQFTKEHTNREKENGSMPTISSILLDPEYPIKDRNIASINNENKQQSMATISVVPPPPRELHNKDGLVVVQVQSSKLSDVRVPEGVTLDLSIKRPREGDSYSDPPPIKHAQPPPPPGAMYRLPPTQIHETNTFYSPQYAELGRSGKQGEIYWTKIPSSNNHAMVHQPQSVPHVTVKQTSHIKLPNKVTSPQLSVANTVSSKLSPNILNNSKATGSIMHGTPVSVATLYMPPQSNRYSQSGQTPGGSITQGTPVQQRMLHNSNPNINTDYYQKRNPQPQYQSRQPHYSEQRQIIMNDYITSQQMHSNVTTQFPRAQKPPVTSPMYYQPTRQGVIQRHNTAPKATSPQSYPPGHEALGSLVDVAIRQPSLPVPLNHSEDRHREQDRYVRGSPVPKPHNMFREQQRHEQMQREREMAVQRELQAVAQIREQQQRDQYLRDKQMMHHRLTPEQHSRMVAASFQQQHQHQQEQPRSMQIPSTVSSFQQSRSNTPVTRHQEPSSNIQSRDNIASGRISRQGMESHALTAANLIDAIITHQINQSNDGSGHPPSTPNPVNNQSHVQQQRAGDKLFQAFPEANEKPNLKPRASPEINSRPSEPYPPEHSFKGYPSYMLAAGFEPNTWKLRRALQQKEFEQQMKDDNNRVRFYPTQADIPLSPLDYVKNRIVEVMRTSDDDNKNEQAYTYPFSAAINMTASATQKNNETSETSGGGSMLTAQYEPMSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018953;
90% Identity
-
80% Identity
-