Basic Information

Gene Symbol
mybA
Assembly
GCA_013282895.1
Location
scaffold:27053568-27056767[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.14 2.9e+02 2.3 0.2 22 45 288 310 284 311 0.88
2 6 2.7e-12 5.4e-09 36.6 1.6 2 46 318 364 317 364 0.96
3 6 8.7e-09 1.7e-05 25.4 0.9 1 45 370 420 370 421 0.88
4 6 0.17 3.4e+02 2.1 0.0 26 43 451 468 447 470 0.80
5 6 2.3e-12 4.6e-09 36.9 0.0 1 43 479 524 479 526 0.96
6 6 5.2 1e+04 -2.7 0.1 3 12 775 784 775 789 0.86

Sequence Information

Coding Sequence
ATGGATGAATATGGTAATTCAATACCTGGCCCATCTAAAGGATTTGAAGGTGAAGAAATTATGGAACCAACAACAGAATGTGACTTTGCATGGTTGGAAAATGAGTTTGACGTGGTTAATATTAATGAAAGTTTGAAAGTTCCTATAAACATAGATCAAAACAATCAGAATTTTAAAAGCAATGAAATTGATTCAAGTTTAAGCAATAATATTGAAGATTTTTTTGAAGAAATCCGGAGTATAGATTTTAGTAAAAATCAAAATGTACAAATCAATGATACTCATATAGAGTTATTAGAACGATGTAATAATTATATTGATATTGTTGGCCGTAATATAGTTTATTTAGAGGAAATGACATCAGAAATTAAAAGAAATATTTCAATTTCAAAACGAAATGCTAACAAAGCGCATGAGTGCATTATGTTTGAAAAATTGTCAATGCGTAAAACTGCAATGCAAAATTTAAAAAAAAAAGCATGCTTAGCAAACTTTTTTAAAATTGGCTTTTCAAACTGTCCATATAATCCTCATCTTATGGAACTTTATGAAACTGGTAGATTGGTCTTAGCTTACAATGGTCGTTTTATACTTGAAGAATGTGTTGAAAGAAATTTATGGAATCAAGAATTTAAAAATAAACTTGAACAAACAATCCATGAAGAAGTGTTGAATAAAATAAAAACTCCTATGATCGAACAACATGCACGACTTGGTATTAAGCAAGAATTTGAAAATGATCCACTAATAAAAAATAAAATTGAACTTGAAAGATTAGAAATTCATAATGAATTAAAAATAATTTCAAACACACCGTTTAAACGTTTGGTATATCAATTTATGGATTCTGATACAAAGTATGATTGGTTGCACATTGCTAAAATAACTAATAAACCTCATTTGCAATGTGAAAGGTTTTGGAATCTTCTATTAAAACCTCATATATCAAGAGCTAAATGGAATAAAGATGAAGAGAACAAATTAATACAAATTGCTATAAAATATGGTGAAAAAAATTGGCAGCAAATAGCTAATGAATTAGGTACTAACCGCAATGAATTACAATGTTTTGTTCATTATCAACGGTATAAGAAAATCCTATACAAAAAAGGCAAATGGTCAAAACAAGAAGATGAGAAGCTCAGGGAGATAATTAAAGAAAATTCCATCGATAGTATAATTAATTGGCAAAAAGTTTACTTTGCTATGCACAATGAAGGGAGATCTGTCGATCAAATTTATAACAGATGGACAAGTTGTTTGAAACCTGGAATTAAAAAGGGGCTTTTGAATGAAACAGAAAAATACATTATTAATATAGCTCAAAAAAAAAAATTGCCCGCATCTGTGGTATCAATGAATCTAACCAATCGAACAGCTGCACAAATTCGCAATGCTTACCGTCGGATTTCACAGTATGATCAAGATATATTAAGAGGGGGATGGATGCCTGAAGAAGATAAAATGTTACTTAGGGCTGTTAATCCATATGCACTTAATGAGTTATCATGGAAACAAGTTTCCAAACAAGTACCTGGGCGTAATCCTGAACAATGCCGTCATAGATTCAATTTAATTGAAAAAAAAATTCAAAAAAATCCAAAAATTACAGTTGAAAACTTTTCACGAATAAGACGAAGTTTCAATGCCAACCCGTATATTCCAGTAAATAATGATTTATTAGATACTAGTAATTTACAAAATAATTTTAAACAAAATCGTCAATTGCAAAAACTATCTGATCATTTAATTGAAACAGATGCTGATCGAAAGTTAAAAAAATCATATTTGGACAATGTTTATGTTACTAAGCATTGTAATTTTTCTAGTAAATGTGAGCTTTTCAAATATATTCTTGATTATATGGGAGTTGATTTGATGGTACCCCAAGAATTTGTCCATAAAGAAGATTTGATAGACGAAGGACTTATGAGTATGATAACTTATTTAAAAGAATGTTCTATTGATATATTGACATTAGAACCTAATAAAATAGGTCTAGATACAATTGATACAAATTATTCATTTATCTATGAAGGAGCTAATGGTGTTTTAAAAACAAGTGACATAATGAATTCTGATATTAGTGAAATAGAAGGTCTATTCGATATAAGAATGAGAAATTTTGATAGTAAAATATCAAAAAGTATTACTGACAGTAATTCAGTATCTAAAAAGATGAAGTTACATCAATTACCATTACATTCTATGGGTTCTGTTCCACCAAACTTTGAAACCTTTAAAATGTTGTATACATATCTGAATAGTTTGACTACATGTCTAAAAACTGATAATTTAAAAGAAGACTCAAATATAAATTTTAATTGGGATAATGAGGAGTCTAAGAAATTACATCAACGTCTTGTTGCCATTTTTAGATGGCCTGCATTATTTTCCGGATTGGTAGATTACAATGCGGCAAAAATAAATATGATGATCAATACTGTACAGACCACAGATTCGAATATAAATTATCATTCTCAAATTCCTTTTTTTCATACAAAAAAAAAATCAACTCTCTATTTTAATTTAAAGAAATTTAAGTGA
Protein Sequence
MDEYGNSIPGPSKGFEGEEIMEPTTECDFAWLENEFDVVNINESLKVPINIDQNNQNFKSNEIDSSLSNNIEDFFEEIRSIDFSKNQNVQINDTHIELLERCNNYIDIVGRNIVYLEEMTSEIKRNISISKRNANKAHECIMFEKLSMRKTAMQNLKKKACLANFFKIGFSNCPYNPHLMELYETGRLVLAYNGRFILEECVERNLWNQEFKNKLEQTIHEEVLNKIKTPMIEQHARLGIKQEFENDPLIKNKIELERLEIHNELKIISNTPFKRLVYQFMDSDTKYDWLHIAKITNKPHLQCERFWNLLLKPHISRAKWNKDEENKLIQIAIKYGEKNWQQIANELGTNRNELQCFVHYQRYKKILYKKGKWSKQEDEKLREIIKENSIDSIINWQKVYFAMHNEGRSVDQIYNRWTSCLKPGIKKGLLNETEKYIINIAQKKKLPASVVSMNLTNRTAAQIRNAYRRISQYDQDILRGGWMPEEDKMLLRAVNPYALNELSWKQVSKQVPGRNPEQCRHRFNLIEKKIQKNPKITVENFSRIRRSFNANPYIPVNNDLLDTSNLQNNFKQNRQLQKLSDHLIETDADRKLKKSYLDNVYVTKHCNFSSKCELFKYILDYMGVDLMVPQEFVHKEDLIDEGLMSMITYLKECSIDILTLEPNKIGLDTIDTNYSFIYEGANGVLKTSDIMNSDISEIEGLFDIRMRNFDSKISKSITDSNSVSKKMKLHQLPLHSMGSVPPNFETFKMLYTYLNSLTTCLKTDNLKEDSNINFNWDNEESKKLHQRLVAIFRWPALFSGLVDYNAAKINMMINTVQTTDSNINYHSQIPFFHTKKKSTLYFNLKKFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-