Elan017252.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- bab1
- Assembly
- GCA_013282895.1
- Location
- scaffold:35475245-35491170[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-16 1.8e-12 47.3 0.0 1 41 151 192 151 196 0.93 2 2 0.48 1.2e+03 -0.1 0.4 6 15 281 290 277 307 0.79
Sequence Information
- Coding Sequence
- ATGTTTGAAAATTCTCAAGCCTGGCTCGCCTCCACGTCCTCGCCCATGACTTTAATTGATCGTGTGTGCAATTGGAAAAGTGCATTGGTCGCGGCTGCAGTGGGTACAGTGCAGCCGACGCGCATAGACCACTACAACTACCGTTTACCGCGCCGCCGCCACCGTTTTTACAGTTACCCGCCGCAGCAACAGAAGAGCGGGTACGTCTCCGTTGACGGCGCACGCCGCCGCGTCGGCACTATTCACCACGTGCGGGCGCCGTCGTCGTCACCGGTCAACGGTAGCGATTTTCCCGGTAGTGGTCGCGATGTAGTGCCAGTTGGTATTGGTGGGCAACAAGCCGATAGTTACCAGTACCAGCTACAGTCGATGTGGCAAAAATGCTGGAACACCAACCAAAGTCTCGTGCACAACCTTCGGTTCAGAGAACGTGGTCCCCTCAAATCGTGGAGACCAGAAACTATGGCTGAAGCCATACTGTCCGTGCTCAAGGAAGGCCTGTCACTGTCCCAGGCCGCCCGCAAGTACGACATACCTTATCCGACGTTCGTGCTGTACGCCAACCGGGTGCACAATCTGCTCGGTCCTTCGGCAGACGGTGGGGCAGACTTGAGGCCTAAAGGCAGAGGACGACCTCAGCGAATATTATTGGGATTCTGGCCAGAAGATCACATTCAAAATGTCATTAGGACTGTGGTGTTCAGAGATGCCCAAAATATCAAAGAAGAAGCATTACACCTTTACCCCAGAATACCGTGTTTGTCGGACCCAATGTCTGGCGGTCACTATGGTAACAACGCCGTTCAGTCGGTAGACGGTCCCGTGTCGCCAAACTCTGCCGCGGCCGCTGTGGCCGCCGTCGCGCAGGGTATACGGCAGCAAATGATGGCCGCTGCTGGACACAATATCTCTCCGTCGTCGGGTGTCGATGCGTTCGCCCTGCTCGCATCCTCACACCTTACCAGTCCGGCCGACATGTCGCCCAACTCGTCTCCTCCCGACTCGCCGCTAGTGTCCAACAATAACGTCGAGGTCAGTCTCAGTGGTTACAAAAGATCAATGGATCACTCCAACCAAGACAATGTGTTTGTTGAAGACATCGAAGAGCTCGTAAAGAACAGTCATTGTACCGGTGGCTCGTCCATGGGCAGTTCCATCGATCAGCAACCGTTACCATTAGTCATCGAGCAACGGACAGAATGA
- Protein Sequence
- MFENSQAWLASTSSPMTLIDRVCNWKSALVAAAVGTVQPTRIDHYNYRLPRRRHRFYSYPPQQQKSGYVSVDGARRRVGTIHHVRAPSSSPVNGSDFPGSGRDVVPVGIGGQQADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNLLGPSADGGADLRPKGRGRPQRILLGFWPEDHIQNVIRTVVFRDAQNIKEEALHLYPRIPCLSDPMSGGHYGNNAVQSVDGPVSPNSAAAAVAAVAQGIRQQMMAAAGHNISPSSGVDAFALLASSHLTSPADMSPNSSPPDSPLVSNNNVEVSLSGYKRSMDHSNQDNVFVEDIEELVKNSHCTGGSSMGSSIDQQPLPLVIEQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -