Elan022839.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- lolal
- Assembly
- GCA_013282895.1
- Location
- scaffold:14676215-14680267[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.4e-12 1.9e-08 34.5 0.0 3 38 412 448 410 453 0.90 2 4 6.7e-12 1.7e-08 34.6 0.1 2 39 465 502 464 505 0.94 3 4 1.1e-16 2.9e-13 49.9 0.0 3 45 521 564 519 564 0.97 4 4 1.3e-16 3.4e-13 49.7 0.1 1 43 571 614 571 616 0.95
Sequence Information
- Coding Sequence
- ATGACTTCCGTATTCCACCAACTTCTCCGAAATGAATCATTTGTTGATGTTACTCTTGCTTGTAATGAAAGCACACTCAAAGCACACAAAGTAGTTTTATCTGCTTGTTCATCATATTTTAAAAAACTATTAATGGATAACCCATGCAAACATCCAACCATAATATTGCCCTATGATGTTTGTTTTAATGATCTGAAATTCATAATTGAGTTTGTGTATCGTGGTGAAATTGATGTATCTCAAGCTGAATTACAATCACTTCTAAAGACAGCTGATCAATTAAAAATTAAAGGATTGTGTGAAGTTCCTGAAGATGAACGTGATACATCAATTATTGCTGAAGTTACTCCTTTAGGACCATTAAAAAGTGGAGGGCGTGTGTTTACCAAATTACAGCGCAGAACTTCACCTTATTCAAAAAAATCGAGTCCAAATCATATCCAGCATGATCAGTTTAATCGAGGTTATTATCGAATAGAGCAATCAGGCTTTGCACCTGCCAATATTGATCAAGAAAACAAACCTGTAAATTCTATTCACTGCATGACTGTAGCAACATCAACTGAAGATGATGAGAAAGATATGAAATCAAGATTAACAGATTTACCAGTTGTTATACTAGAACCACATCCTTCAATAAGTTTACAAACACAACAACAACCCCAGATAGTTCACTTACCTATACCACAACAACAGCAACTAAATCATGTAACTCAACATTCAAATCAAACTCAGTTACAACAAACTGCTCTTCAAAGTCATTCACAAATGATTATTACAACTGCTCCCGCTATGACAGTAAATGAAGTTGACATTGCGCCTGATTTACAGCCTGTTGGACCAAGGGCAACACCAGTACCAGTAAAAAATAACACAAGTCCTTCATCACCTCCAACACATAGAGATATGGCTGTGGGTACTTCGTGTTCAAATGATGTGATGAGAAGTGATGGAAATGATGGAAATGAAGTAAAATTTGAAAGTTCTAAATTTGAAACACTTCGTACTATTGACCAATCATCTGACGTGATTGGATTAGAAAGACAGCATTCTAGTGACCGTAATATAAATGATGAAGATAACTCAATGCATACAATGATGATAACGCCTGAACTTTTGGGATTATTACCAAATTCTTCTAATACAGAAAGTACTTACAATGTCCATGAAGATAGTTCTTGTAACAATATAAATAAACAATATACTACAAATGGTGGCAAAGGATGGAATTCTGATGACATGGATAATGCTTTAGAAGCGTTACGTTCACATAATATGTCTTTGACCAAAGCATCAGTAACATTTGGTATTCCATCTACAACATTATGGCAACGAGCTCATCGTGCTGGTATAGATACTCCTAAAAAAGATGGGCCTGCAAAGTCTTGGAATGATGAAGCCTTAAATATTGCTTTAGATGCTTTGCGTACTGGTACTATTTCAGCAAATAAAGCAAGTAAGGCATATGGCATACCTAGTAGTACTTTATATAAAATTGCACGACGAGAAGGTATTAGACTGGCTGCTCCTTTTAATGCGGCTCCAACATCTTGGGGTCAAGAGCAGTTAGACCAAGCATTACATGCTATACGAACGGGACAGACAACTGTTCAAAGAGCTGCTGCTGACTACGGAATACCTTCTGGTACACTGTACGGGCGGTGTAAACGTGAGAAGATTGAATTATCTCGCAGCAATCCAACACCATGGTCTGAGGATGCTATGATGGAAGCTCTGGAGTCTGTACGATTAGGTCATATGAGTATTAATCAGGCAGCTATACATTATAATTTGCCGTATTCTTCGTTATATGGTCGTTTTAAAAGAATAAAATATGGAGCTGGACATCCAGACGATGATTGTGATGATATGATTGATTCAGACACTCAGAGTGAACAGCATATGCAACAACAACAACAACAGCAGTCAAATCAACAAGTTCAGACTACGCCTGTATCCCAAATAATGTTGGTGCAATATCCAGCACCACAAATTCAAATGTACCAGCAACACCCAACCCATTCATCAGCTAGTTGA
- Protein Sequence
- MTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFKKLLMDNPCKHPTIILPYDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIIAEVTPLGPLKSGGRVFTKLQRRTSPYSKKSSPNHIQHDQFNRGYYRIEQSGFAPANIDQENKPVNSIHCMTVATSTEDDEKDMKSRLTDLPVVILEPHPSISLQTQQQPQIVHLPIPQQQQLNHVTQHSNQTQLQQTALQSHSQMIITTAPAMTVNEVDIAPDLQPVGPRATPVPVKNNTSPSSPPTHRDMAVGTSCSNDVMRSDGNDGNEVKFESSKFETLRTIDQSSDVIGLERQHSSDRNINDEDNSMHTMMITPELLGLLPNSSNTESTYNVHEDSSCNNINKQYTTNGGKGWNSDDMDNALEALRSHNMSLTKASVTFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDEALNIALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRIKYGAGHPDDDCDDMIDSDTQSEQHMQQQQQQQSNQQVQTTPVSQIMLVQYPAPQIQMYQQHPTHSSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_00670373;
- 80% Identity
- iTF_00670373;