Elan011682.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- retn
- Assembly
- GCA_013282895.1
- Location
- scaffold:28316183-28325027[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-18 3e-14 53.8 0.0 27 89 2 62 1 62 0.94 2 2 0.17 9.5e+02 0.9 0.1 69 86 132 150 118 151 0.71
Sequence Information
- Coding Sequence
- ATGGCGAAACGAGTGTTAGACTTATACACCCTTTACAAACTGGTCGTACAAAGGGGCGGAATCGTATCGGTGATCACTAAAAAACTGTGGCAAGAGATAATTCGAGGTCTGGGCTTACCACCATCTATAACCAGCGCTGCTTTCACTCTGAGAACGCAATATGTTAAATACTTATACGCGTACGAATCGAAAATGAACCAGTTCAGCACAGTTGACGAACTGAACATGGCTATAGCAGGCAACCGACGTGAGGGTCGGCGTAACAAGTCACTGTTGTCCGAGTACTTACCGTCACTCCCGGCGTCCGTGGCGGCCGCTGCCGCCGCAGCAGCAGGACATCATCTCATTCCGTCGTCGGGCATGCAGATGTCGCCGGGTTCGTCTACAGCGCACCACCATCAACAACAGTCGCACCAACAGCACCAACAGCATTACGCCAACGTTCTGGCCGCCGACGACCGCTTCCGTCACTTGGCCGCCGCAATCATAGACAACAGACATCGCACTGCGGAACAGTTGCACGCCAGACAACAAACGCCGTCCTCGACGTCCTCGCGGCCGGCCAGTCCGCAACGGTTAACCGGACACCTTCCGGCGGCAGCCGACGCGTCCACGTTCAACGGCCATCACCAACAACAGCCGCCGCAGCAACTACCGCCACCGCCTTATCAATCAGTCTCAGCGATTGCAGCCGCACACCAAGCGGCAACCGCGGCCGGCGACCACACCAGCAAACAACGAGAACTTCTCAGTATGTTAATGTGGATGGATTTAATGAGAGCAAATCCAACGGCAATTCCAAGACTTCCAATGCCAAACTTACGACAGTCCAGCCCTTCGCCGTACGCTGTGGCGGCCGCAGCAGCGATGAATATCCAGTCTCACCCGGTAATGACATCACAAAAAAGCTCCGCGCCGGTGCCCGAACAATGCGAGGCGTTGAACTTAGGCAAAAAAAACACCGCGAACAACAACAACGCGGGCGAAAACGAGGACGAACCGTCGGCGAAGCGCGCGAAAACGGCCGAAAGGTTGCCGCCGCGAGTGCAACAGGTGGCGACCATCAGCCGTCCGACGACCCCGTCACGGGAGTCGTGTCACTCGCCGGAACGGAGTGTCGCGGACGGCGACGACGAAGAGGGTAACGGAGGCGATGGTGGAGGCGATGGAGGATGCGATGACAAGAACGACGGAAACAACAACAGCAATATTATCGAAATGGATATCGACGTGTCTGCCGGTGAGATATTATGTGTTTTGTTAAGAGTGTTTTCTATTATTAGCTAA
- Protein Sequence
- MAKRVLDLYTLYKLVVQRGGIVSVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESKMNQFSTVDELNMAIAGNRREGRRNKSLLSEYLPSLPASVAAAAAAAAGHHLIPSSGMQMSPGSSTAHHHQQQSHQQHQQHYANVLAADDRFRHLAAAIIDNRHRTAEQLHARQQTPSSTSSRPASPQRLTGHLPAAADASTFNGHHQQQPPQQLPPPPYQSVSAIAAAHQAATAAGDHTSKQRELLSMLMWMDLMRANPTAIPRLPMPNLRQSSPSPYAVAAAAAMNIQSHPVMTSQKSSAPVPEQCEALNLGKKNTANNNNAGENEDEPSAKRAKTAERLPPRVQQVATISRPTTPSRESCHSPERSVADGDDEEGNGGDGGGDGGCDDKNDGNNNSNIIEMDIDVSAGEILCVLLRVFSIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -