Epel027316.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- stc
- Assembly
- GCA_011428145.1
- Location
- WOFM01000631.1:3912519-3930244[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.92 3.2e+04 -4.0 1.6 15 19 298 302 297 302 0.81 2 17 0.032 1.1e+03 0.7 0.4 4 10 332 338 331 338 0.95 3 17 8.1e-06 0.28 12.2 18.1 3 19 352 368 351 368 0.93 4 17 5.1e-09 0.00018 22.4 11.3 1 19 404 422 404 422 0.98 5 17 1 3.4e+04 -4.1 1.4 6 10 451 455 450 455 0.86 6 17 5.6e-09 0.00019 22.3 11.3 1 19 461 479 461 479 0.98 7 17 0.16 5.5e+03 -1.6 1.0 5 10 509 514 509 514 0.96 8 17 9.9e-05 3.4 8.7 11.1 4 19 527 542 520 542 0.88 9 17 0.59 2e+04 -3.4 2.6 5 10 570 575 570 575 0.94 10 17 0.00019 6.6 7.8 8.6 1 11 581 591 581 592 0.97 11 17 0.17 5.9e+03 -1.7 1.6 4 10 596 602 595 602 0.92 12 17 7.5e-09 0.00026 21.9 11.4 1 18 608 625 608 626 0.97 13 17 0.84 2.9e+04 -3.9 0.7 6 10 655 659 654 659 0.78 14 17 1 3.4e+04 -5.2 9.3 9 18 672 682 662 683 0.80 15 17 4.3e-07 0.015 16.2 12.1 1 16 719 734 719 744 0.91 16 17 4.4e-06 0.15 13.0 13.2 1 19 751 770 751 770 0.96 17 17 0.14 4.7e+03 -1.4 1.3 1 8 779 790 779 791 0.79
Sequence Information
- Coding Sequence
- ATGAGCCACAatcttaatgaaatatttacCAGAGCCGCCAATTCTAATTTGACGCCAACGGCGATTGAATTTGTTCCTAGATCTACATCAAATTTCACGCGTTCTTGGCAACCTGAACCATCGCCCACGAATATTCATTTTGGAGACAGAAACAATAGTAACGCTCGTTACAATCCGCGAAATCATTACGATCGAACTGGATATCATAACGAGTACAATGGCAGATATGATTATCCGACAAACCACCAAGATAGATATGACTATTCTAATAATTGCAATGAGAGAAATGACAACCGTTTTCGTTACAATGACCGATTTGAGCCGTGGCGACATCATAGTGACAGACAATATAAGTCTTATGACAGCAGATCCATTCAACATAAAAACCACCAACGAAATGATTGCTTGTCGAATACAAGGTCATTTTCGAGTAATGATAAAGAAGATAAAAGACTCAACGAGAAAGAACGCGATAATTTCATGGAGCCAAAACGTAATGGATATAAAGAGAAGGCAGGGGACGATAGTGCGGTATCTTTTGCGCCAAAAACTCGCGAAAACGCAAATCAATACCGGTTTTCCGATGCCAGTAGCATGATGCCCagtttagtttttgaaaatcgTTGGCCAAAGACATCAAGTAACAACAATCATAGTTATAAACTCAATGATATAGCAAAAACACACAGCATCAAAGGGAACCAGTCAATATGTCAAAGGGATCGGTTAATAGAACAGCTAAATAACGGTACGTTGGAATGTCTTGTATGTTGTGACACCGTCAAACAACGAGAGCCTGTTTGGAATTGCAGCAATTGTTACCACGTTTTGCATAAGTGGTGTGTGATTAAATGGGCCAAATCGTCTAAAAAagAAAACAGTAATTGGCGATGTCCAGCTTGTCAAGATGAAAAATCGAACGTTCCCGACAAATATATGTGTTTTTGTGGCAAAAGTAAACTTCAAACTGAATGGAACCGCATGGATACGGCACATTCGTGTGGTGAAGTATGCGGGAGAAGCAAAGACAACCCCACTCCGTGGTTCGTTTGCGAACATCATTGCACCCTGTTGTGTCATCCCGGTCCATGTCCTCCTTGTACTATTCAAGTATCTAGAGAATGCGGTTGTGGACGCTCCACGCAGATCGTTCAGTGTAGCACAAAAACTGAAATAGTTTGCGGATCAATATGCGATCGCCTGCTTAACTGTGGCCAACATCGATGTCTTAAAACTTGCCATGTTGGCGAGTGTGAAGTGTGCAGCGTGAAGCTGAAGTATAACTGTTTTTGCAATAAGAAGGTGAAGGAAATAGTTTGTGGcgaagaaaatattgaattgaAATTCAGTTGTCAAGAGAGATGCGATCGCGTGCTCAGCTGCGGCAATCATAAGTGCTTGAGTATTTGTCACGAAGGCGAATGCAATTTGTGCCCCAAATCGCCAACAGTTTTGGATACTTGTGCGTGCGGTAAAAAAACTTTGGACAAGAATACGCGAACCTCGTGTTTAGATCCAGTACCCACGTGTGATCAAGTATGCAATAAACCCTTAGCCTGTGGCCCTCTGAGTAAGCCGCATCTGTGTGAATTTACTTGTCACGAAGACGAATGCCCTCCCTGCAGTAAACAAACGACGGTAAAATGCCGTTGTGGAGCGTTGGAAAAATCAATACCCTGCGTCGAATTGGCCAAAGGAGGTGTGTTTAAATGTCAGAAGAAATGTGCTAAGAAACGCTCTTGTGGTAAGCATAAATGCAATCAAGTGTGCTGCATAGACGTCGATCATGTGTGTCAACAACGCTGTAGTGGCACTATGAGCTGTGGCAAACATCGTTGTGAGTTATTATGCCATCGTGGAAAATGCGGACGATGCCTGCAAAGCAGTTTCGAAGAGTTATACTGTCATTGTAGAAGTTCCGTAATTTATCCTCCTGTTCCGTGTGGCACCAAACCTCCTGCTTGCGACAAACCGTGCCGTCGAACTCATGACTGTGAACATTCGCCGTTGCACACCTGCCATTCGGATCGTGAATGTCCACCTTGTATCGTCTTCACCGATAAATTATGTTACGGTGGTCATGAGCTTCGTAAAACCATTCCTTGCTACCAGAAAGATTTTTCATGCGGTTTACCGTGCGGTGCGCCTTTGCTATGCGGCTCGCATAAATGCCAGATACCGTGTCATGCGGGCGATTGTTTGAGCACCAATAAGAAGTGCTCGCAGCCATGCACAAGAGTACGTGATCTTTGCGGACATGCGTGCGCAGCACCGTGCCATACAGGCGTATGCCCAAGTACACCCTGCCGCGAAATGGTGAAAGTTACCTGCGCTTGTGGTAATCTGGTTGTCAACCACCAATGCAACGAACATGCGGACGACTACCGCCGTATAATTTCATCGACGTTGGCTGCCAAGATGGCCGAATTGCAAACCGGCAACAGCATCAACATTGTCGACGTAAACGAGAAAATAAATGCACTAAAGATCAACCTTAGAACTCTTGAATGCAACGACGAATGCAAGTTCATAATGCGCAATCGACGTTTGGCATTAGCGTTGCAGATTCAGAATCCGGACCTTAGCGCTAAGCTCACTCCGAAGTATTCGGATTTCATGAAGTCGTGGGCAAAGAAGGACCCGACGTTATGTCGCCATGTGCACGATAGACTGACGGAGCTGGTTAAATTGGCAAAGGAGTCCAAGCAGAGAAGTCGCAGTTTCTCTTTCGAAGTCATGAACAAGGAGAAACGCCAGCTCATCCACGAGTATTGCGCCCATTTTGGTTGCGAATCGGAAGCTTACGATGCGGAGCCAAAGCGAAATGTCGTCGCCATCGCCTCGAAAGGGCGGTGTTGGTTACCAGCCTATTCTGTTGTTGAAGTCGTTCAAAGAGAGATGGGCCAAAGAAAAGTACCAATACCGATGCTCAATAAGAAAATGGCGAAGTAA
- Protein Sequence
- MSHNLNEIFTRAANSNLTPTAIEFVPRSTSNFTRSWQPEPSPTNIHFGDRNNSNARYNPRNHYDRTGYHNEYNGRYDYPTNHQDRYDYSNNCNERNDNRFRYNDRFEPWRHHSDRQYKSYDSRSIQHKNHQRNDCLSNTRSFSSNDKEDKRLNEKERDNFMEPKRNGYKEKAGDDSAVSFAPKTRENANQYRFSDASSMMPSLVFENRWPKTSSNNNHSYKLNDIAKTHSIKGNQSICQRDRLIEQLNNGTLECLVCCDTVKQREPVWNCSNCYHVLHKWCVIKWAKSSKKENSNWRCPACQDEKSNVPDKYMCFCGKSKLQTEWNRMDTAHSCGEVCGRSKDNPTPWFVCEHHCTLLCHPGPCPPCTIQVSRECGCGRSTQIVQCSTKTEIVCGSICDRLLNCGQHRCLKTCHVGECEVCSVKLKYNCFCNKKVKEIVCGEENIELKFSCQERCDRVLSCGNHKCLSICHEGECNLCPKSPTVLDTCACGKKTLDKNTRTSCLDPVPTCDQVCNKPLACGPLSKPHLCEFTCHEDECPPCSKQTTVKCRCGALEKSIPCVELAKGGVFKCQKKCAKKRSCGKHKCNQVCCIDVDHVCQQRCSGTMSCGKHRCELLCHRGKCGRCLQSSFEELYCHCRSSVIYPPVPCGTKPPACDKPCRRTHDCEHSPLHTCHSDRECPPCIVFTDKLCYGGHELRKTIPCYQKDFSCGLPCGAPLLCGSHKCQIPCHAGDCLSTNKKCSQPCTRVRDLCGHACAAPCHTGVCPSTPCREMVKVTCACGNLVVNHQCNEHADDYRRIISSTLAAKMAELQTGNSINIVDVNEKINALKINLRTLECNDECKFIMRNRRLALALQIQNPDLSAKLTPKYSDFMKSWAKKDPTLCRHVHDRLTELVKLAKESKQRSRSFSFEVMNKEKRQLIHEYCAHFGCESEAYDAEPKRNVVAIASKGRCWLPAYSVVEVVQREMGQRKVPIPMLNKKMAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -