Epel003532.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- -
- Assembly
- GCA_011428145.1
- Location
- WOFM01000081.1:843473-849144[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.059 10 7.7 0.3 1 23 84 108 84 108 0.98 2 11 0.0078 1.4 10.4 0.1 3 23 115 135 114 135 0.95 3 11 3.8 6.8e+02 2.0 3.8 1 11 180 190 180 203 0.79 4 11 0.00019 0.034 15.5 0.3 1 23 347 369 347 369 0.98 5 11 0.005 0.89 11.0 0.3 1 23 379 401 379 401 0.99 6 11 0.0035 0.62 11.5 3.7 1 23 407 430 407 430 0.97 7 11 0.084 15 7.2 1.6 1 23 857 880 857 880 0.93 8 11 0.0049 0.87 11.1 1.5 3 23 1110 1130 1108 1130 0.96 9 11 1 1.8e+02 3.8 4.8 1 23 1136 1159 1136 1159 0.94 10 11 0.018 3.1 9.3 3.3 1 23 1242 1266 1242 1266 0.93 11 11 0.0092 1.6 10.2 0.9 1 23 1349 1372 1349 1372 0.92
Sequence Information
- Coding Sequence
- ATGAAGATCGACGCGGTGGTAGAAATGATTCATAAGAATGGTAACCTCGTTGATCGGTCGAAGCAGCATAGATCCGCCATCAAAGAATTAATTCTCAACAACAATTCGGTCATCGCGctaaacaacaacaacaacaacaacaacagcagcagcagtatTGCTGACGACGAGCACCACAGTGCTGATAgcaacaacgacgacgacaacaacaacgacgaccACTTCGTGTATAACGACGATTTTCGCCAGTACAAATGTCCGGTGTGCAAATCGGAACGGTTCACGGCCGGTGATTCGCTCGATCAGCATCTGCGCACTCAGCATCCGAGTTTCCGGCCGTCGTGTCGCGACTGCGGCGAACTGTTTCCCACTCTCAAGTTGCTCGCGCGCCACAGCATCATGCACGTGACCGaaggcggcggcggcggcgccgCCACTATGCGCACCAATCCCATCAACTCCAAGATTCTCGACTACCTCGAGAGCAAGAAGTCGCTATATCAGCAGTTCTCCGACAGCTTCGAAACTAGTCAGTCGTACCGCTGCAACTTCTGCGGCGAGCATTTCGCCGGCGCTCATTTCATGAGCCACTGGAAGCAGTGCAAACACTTCCAGTCGAAGAGCATTACCGGCGACGAGAAATTTGGTGGTAGCGGCGGTGACTGCGGCGACGGCGGTGGAAGCGGCAGCGGCGAGGAAATGAAAAGTAGCTTTTTCGCTGGCCTCAATTTGCACAGTCGCCGCGACAGCCGCAGTTCTTCCGACTCGGAGTCGCATTACTCCGTCAAGTCGGAACGCACGGATGAGGAGTTGTCGTCGGCGGCCACCGCCACCGCTGCCGCTATCACCACCACCGCCGCCGCGAACGCCGCCGGCTCCACCATTAAGCTACCAACGCATCTGATTAACGCCATCCAGAGTACGCCCTCCTATCCGCCATCCAGTGCAACTGCCGCGGAGTGCGAGGGCGATAAAAAACTGAGCAAAGACGAAATAGAGTTTCTGAATCGCGTGCGCGACATGAAAAGGCGGGGCGAATTTCCGTGCCGCCTGTGCACAAAGGTATTCCGCAACCTGCGCGCCCTCAAGGGACACGCGCGCGTTCACATCGCCGGCATTCGTAATTCCAGGCCGTATCAGTGCAATATCTGTTTGTTCTCGACCGCCGACAAGTCGGTCATCATTCGCCACATACGTAACCACAACGGCGACCACCCCTACAAGTGCCAGCTCTGCCAGTCAACCTTCACCACCAAGGCGAATTGCGAGCGTCATTTGCGCAACGCACACCGCAAAACCTCTCGCGAAGATATCAAACGATTGTTGGTCGACCTGAACAACAAACAGCAAAACAATAGCGCATCTGCCGCCACTCTGAATACCACTTCCTCGTCGTCAAATCCTGCAAATGTTATCAACAAATTGGAAACACTGCTGACTGCTGGTCAGGCTAGACGCGCCAAAGATAAATACAGTTCCGTTGCTAGCTCGTGCAGATCCAGCAGCTACCACGACAGTAGTGAGAACGACGAACGTTCTGGTCATAGCTTTCAGTTTGCTGATAGGTCGGAGCATCGCAGTGATGCGGAAGACAGTAGCAATAGTAATGACAGCAATAACAATACCAACTCTAGCCTGGCTGGGGACAAGAAACTCGATAGTTACCGCATGCTACCAATGCTGAATACCAAATATTCTGATTTTCGCATAGCAGGTCTTCTGGACATGCGTGCCTCTAAATCGGAAACtgatatattcaaaaataacataATGATGAGAACGGGGTTCATGCTACAGGATAATGGTTTCATCAAAGTCTCACCTTTTGCGCCATATCCAGAAACAGAGCCTGTAGACTCTGAGCAACCACTTGACTTAAGTGTGGATTTGCATGACACTGATGAAATGCACATGGATGCTGATGTAGAGGATGCCGACTCTACAGAAGGCAGTATTGTGCAAGTAGGTGATGCGGGTGCGCTGGTGCTAGATCTGCGCAAGAAAAAAGACACCGAGGTTGAAGATCTATCCTTGCGAAGATGTAATGGTGACCTCACACCTCCACCACCACGACCAACTATTTCACGTAACGGTTTACCTCAAACACCACAATTGTTCCTGCGCAGTAACACACCCTACGTTTTTCCAACTACaccaattttaccaaatttgtcGTCCTTCTTTGTGCCAGCTGGCAATCTTAGTACTGCATTCCCTAGTGCTTCTAAAATTGAAGCAGTGGATAGTGTTGGCTCTGAGAACCTGCATCAATCTAAATTGCGACCACTTATATATGAACGACTAGTGGCAAATGCTGCTGCTGTGGAGCATTTTGATGACCTTCACCAAGGAGTTCCATCCTTCATGGATTATACCAAAACGGCTTCTGTCACCAATGCTGTTGGCACCTCCAACAATCATGATGACCACGCTGCTATTCCAGCTGCTAAAGATGCGATGGTAATGAAAGTTCGCAACAACAGTAAGTCATCAACTGTAAAAATGGTGATGAAAGACGGTGTTCTAGTGGAGAAGCAGAAGCAACGTCGTTACCGCactgaaaaaccatttttgtgTGCCCACTGCCCTGGCAGGTTTACACTGCGTTCAAATATGGACCGCCATGTGAAACAACAGCATCCAAACCATTGGCGTCAGCGTCAACGTGGTGGCTCCAGTCGATCACAGCGTACCAGGATGAAAGATGACATGAGTGACTCTGTAAGTGTGAAATCTGAGCCACAAATGAGTCAGCAGCAGGAGATCACTGGTGCAGAAGGCGAGTGCGAGGTGTCATTTGATAAACGATCACTGGAATCAAGTGACATAGAGGCTGATGATGATTTGGAGTGTGCTATGACAAAACGCTGCAAGAAGAAGGAGGAGGAGCCAACTGAAAACTGTGGTGCTGGggaagatgatgatgatgaagcaGAGGATTTAGTCATCGATGAGGAGGTAAAAGATATCGAAGTAGctgaggaaaaaaatgaagtctCAACACTTTCCATAGTTTCCACTGAGAAGGAGGCAACTGTGAAAGAAGAGAATCCAGATTTAGCTAGTGTCAGATCACTGCTGGACAATGTTTCAACGCAGACATTCAGCCAGTATTTTGGCAATGAAGAGGATCGCAGTAGTAAACATGACGATGGTAgcgaagaagatgaagaaggaTTGGTTGCTGGTAGTAGCAGCGAAGGAAATGGTTCCGGTGGTGAGGAGAACagGGCTCCCACCGATGTACATGCCAAAATTGATGACAAAAATGCGATCAGTACCAAGAAGAAGAAGAGCGCCTACTCGTCAGCTCCAAATCGCGTCCATTGCGACTTCTGCTCGCGCTCATTCCCATGGGCATCATCCCTACGCCGGCACACCCTCACACACACTGGCCAAAAACCATACAAATGCTCCAGCTGTCCTCTACTCTTTACCACCAAATCAAATTGCGATCGCCATTTCTTGCGCAAACACCGTGGCCAGCTAACTGAAACCCAGCAACAGCTTGCCATTGGCACCACCGCTGCTACGTCCACCTCCACAGCCCTTCTTAATCCCACCACTACCATCTCTTCCACCATACCCAGCTGTGGCGCTATTTCAATTTCCAGCAATGCCGCCCCTGCCGCTGCTGCTACAGTCACAAATGATGGCGCCGTTTCCACCTCCGGCAACCGTCTTATACCAAATTTTTCCACCCGAAATGTGCCAGAACGACCGTTCAAATGCAGCCATTGCCCCAGCTCTACCTTCTCCACGTACCAAAATCTGAAGAAGCACATAATTGACAAACACAACCAGCAAGACAGCCGCGACGTTGACGAGGCCTACCATCCGGAATTGCTGAGACTACCCAAAGATGACGCTGCTGCCGCCCCCGGACTGAATTCATCTGATAGTAGCTACCTGTCGGATAAGTCGGCGTGCGAGGAGAAGGACGTTAAGGGCACGCTTGGCGGTGCTGCAACCTCGACAGGTGCTGCTGCGAGTGCTGCAGCCATCGACCAGAGCTTCTCTGGTCACGTGTCATCCGATCTGCCGTTTAAGTGCCATTTATGCGACCGTAGCTTCGGCGAACGCCAAGAAGCGTTAGATCACATGAGCGAAAGTCACGCGGCCGAATTCCAGCAGCTGATCTGCAAGGGTGCGCTGGACATGACGGTGAAGCTGGAGGACACGGCTGCCAACCACGAGGAGGCTGTGTACGCGAACGCGAACAGCGACGAGAACACCCTGGAGCTGAACCGTGGCCGTTTTCCAGATTATTCGTGTCGAAAGGTAGGCGATGGCGGCGATGATGTGCTCTCTGGCGTAGATACCATTTTCCGATGGCACGTCCGATGA
- Protein Sequence
- MKIDAVVEMIHKNGNLVDRSKQHRSAIKELILNNNSVIALNNNNNNNNSSSSIADDEHHSADSNNDDDNNNDDHFVYNDDFRQYKCPVCKSERFTAGDSLDQHLRTQHPSFRPSCRDCGELFPTLKLLARHSIMHVTEGGGGGAATMRTNPINSKILDYLESKKSLYQQFSDSFETSQSYRCNFCGEHFAGAHFMSHWKQCKHFQSKSITGDEKFGGSGGDCGDGGGSGSGEEMKSSFFAGLNLHSRRDSRSSSDSESHYSVKSERTDEELSSAATATAAAITTTAAANAAGSTIKLPTHLINAIQSTPSYPPSSATAAECEGDKKLSKDEIEFLNRVRDMKRRGEFPCRLCTKVFRNLRALKGHARVHIAGIRNSRPYQCNICLFSTADKSVIIRHIRNHNGDHPYKCQLCQSTFTTKANCERHLRNAHRKTSREDIKRLLVDLNNKQQNNSASAATLNTTSSSSNPANVINKLETLLTAGQARRAKDKYSSVASSCRSSSYHDSSENDERSGHSFQFADRSEHRSDAEDSSNSNDSNNNTNSSLAGDKKLDSYRMLPMLNTKYSDFRIAGLLDMRASKSETDIFKNNIMMRTGFMLQDNGFIKVSPFAPYPETEPVDSEQPLDLSVDLHDTDEMHMDADVEDADSTEGSIVQVGDAGALVLDLRKKKDTEVEDLSLRRCNGDLTPPPPRPTISRNGLPQTPQLFLRSNTPYVFPTTPILPNLSSFFVPAGNLSTAFPSASKIEAVDSVGSENLHQSKLRPLIYERLVANAAAVEHFDDLHQGVPSFMDYTKTASVTNAVGTSNNHDDHAAIPAAKDAMVMKVRNNSKSSTVKMVMKDGVLVEKQKQRRYRTEKPFLCAHCPGRFTLRSNMDRHVKQQHPNHWRQRQRGGSSRSQRTRMKDDMSDSVSVKSEPQMSQQQEITGAEGECEVSFDKRSLESSDIEADDDLECAMTKRCKKKEEEPTENCGAGEDDDDEAEDLVIDEEVKDIEVAEEKNEVSTLSIVSTEKEATVKEENPDLASVRSLLDNVSTQTFSQYFGNEEDRSSKHDDGSEEDEEGLVAGSSSEGNGSGGEENRAPTDVHAKIDDKNAISTKKKKSAYSSAPNRVHCDFCSRSFPWASSLRRHTLTHTGQKPYKCSSCPLLFTTKSNCDRHFLRKHRGQLTETQQQLAIGTTAATSTSTALLNPTTTISSTIPSCGAISISSNAAPAAAATVTNDGAVSTSGNRLIPNFSTRNVPERPFKCSHCPSSTFSTYQNLKKHIIDKHNQQDSRDVDEAYHPELLRLPKDDAAAAPGLNSSDSSYLSDKSACEEKDVKGTLGGAATSTGAAASAAAIDQSFSGHVSSDLPFKCHLCDRSFGERQEALDHMSESHAAEFQQLICKGALDMTVKLEDTAANHEEAVYANANSDENTLELNRGRFPDYSCRKVGDGGDDVLSGVDTIFRWHVR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -