Epel002224.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- -
- Assembly
- GCA_011428145.1
- Location
- WOFM01000049.1:342655-347791[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.63 1.1e+02 4.4 2.9 1 13 187 199 187 209 0.87 2 18 0.0045 0.8 11.2 3.2 1 23 245 268 245 268 0.93 3 18 2.1e-05 0.0037 18.5 2.7 1 23 339 361 339 361 0.98 4 18 8e-05 0.014 16.7 1.9 3 23 402 422 402 422 0.99 5 18 0.0016 0.29 12.6 3.3 1 20 496 515 496 517 0.94 6 18 0.12 21 6.7 5.0 1 23 544 566 544 567 0.96 7 18 0.023 4.1 8.9 2.2 1 23 598 620 598 620 0.93 8 18 0.45 80 4.9 0.2 3 23 657 677 656 677 0.97 9 18 0.0012 0.21 13.0 0.1 2 23 699 720 698 720 0.96 10 18 0.042 7.5 8.1 0.2 2 23 796 817 795 817 0.96 11 18 0.072 13 7.4 0.9 1 23 886 908 886 908 0.99 12 18 5.8e-06 0.001 20.3 4.6 2 23 918 939 917 939 0.97 13 18 7.8e-05 0.014 16.7 0.6 1 23 954 976 954 976 0.98 14 18 0.0019 0.35 12.3 1.7 1 23 1161 1183 1161 1183 0.99 15 18 1.7 3.1e+02 3.1 3.4 1 23 1208 1231 1208 1231 0.83 16 18 0.00093 0.17 13.3 1.3 1 22 1263 1284 1263 1284 0.97 17 18 0.48 85 4.8 0.4 1 23 1314 1336 1314 1336 0.97 18 18 1.9 3.4e+02 2.9 2.7 1 20 1340 1359 1340 1361 0.93
Sequence Information
- Coding Sequence
- ATGGGAGATACAGAAATAAAGTTTCCAAACGATGTATTCAAGATCAAGGACAGAGTTGGCAATCTTCCTTTTGCATTCCAACAAGATGATATTACGATGAAGGCAAACTGGaacaaaattccaatttttatgAACAGCGAAAAATCCTCTGTCAGCACTGAATATAAATTAACATATTCTATCTCTACTGCAGAATCTGAGAATGAAATTGCCAATGAATGCCTAATGGATGAGGTTAATTATAGATTACATattgataatgatgatgaagaGGACCAAGACCTGATGACTGGCAGCAACTTGAGCACCCAATTTAGCTGCAGTGATAATATAAATGTAGCTGCAGACAACACGGGTGAAAAAGAAAACTCCTTGCAACACTGGGTGCAGAACTCTGTTAATATACACAGCGATAATCATCTTGCAGCTGCAGACTTGCAGGAAAATTTTACCCTCCCAGACATCAAAAACAACATTGTTGATAGTAAAATTGATGAATCGATAACTATCAAACCTTTAGCAAAGATCATCACTTCCATTAAAGGCCAAATAAATTTGTTCAAATGCGAATTTTGTCAAAAACAGTTTTCAAGCAAACTTGAACATAAATTTCACATTACGTCTCACCCGATGATGTTCTTAAAACAGGACAAAAACAATTGTATGGTGATGATGCAGAATGATGTGCCCAGTAATGTGGCTGCGGACTTGAAAGGTGGCACATCCTCCAATTATGTTtgccaaaaatgtaaaaaacaattTGCTGATCAGATCACCTTAACAGTCCATTGTCAGACTTTTCATGAAACAGATTCACTAAAACAACCATCGGAAAATTGCTCGACAAGGTCCTCATCAACTATAAGTGATGTTTTCATGCATTctgataataacaataatactGGTGTTATTGTGGTTGCTACTGGAAACACAACATTTGAAACTGGAGTTACTGGAGACAATTCTACAAATAtgaatgccaacaaaaatagTGAAGATTATATCATGAAGCAATATAAGTGCTACATCTGTGACAAGCAATTTGCTCGCCACAGTAGCCTTGTATCGCATATccaatttcatgaaatatttacATTGGAGAAGTTGAAGAAGAACAACCAAGATCGGGAAAATAGCCTCACTCGTAGTAGTATTGGGGAAATCACCAAATCCCCCATTCTTGATAAAGACCACTTTATTTGGTGTCAGGTCTGCAATAAAACCTACAAATCACAATTTGCTTTTCGCAGACATATGGTTACTCATAATTCACTTAATTGTGAAGAGTTTAATGGTGCAGATAGTAGGTTCAATCAAAATAGTGAACATAATAAGCATTGTCTCAAAGCTTCCATGGCAGTTACAGATGAAGGTAGTGACAGCTCTAGAAACTACCACATAAGCATCAGCAATGAATATACAAACATGCTACACCAAGTGAATAATGATGAGCCTCTCCCTTTACACCATCAACATTCTATTAAGTTCAAATGTAGTTCTTGCAATCAATGCTTTACCACTAAAGATAAAATGAAGAAACATGCAGAAATGTTTTGCAAAGCACTTGCTACTACAGTGAACCTGGAAGAGGCCAATGGTAAAAATGCAGATGAGAATGTGATTAAGACTTTTAGATGCAAATTCTGTACTTCCCAGTTCTGGACTGAGAGCAACCTCAAGATTCACTACAAATCTCACCATCAATTGGATTCCACTGACATAGTTAATAATAATGTGATGCTAAATGATGccttaacaaacaaaatttatatagaGAAGGATGATGGCACTTTCCAATGTGTCCTGTGTGACAGAAAATTCAAGACACATAGAGGTGTCATACAGCATACTGGTTATCACATGAATGCTGAGTTAGAGCAGTTGTGTGGCAGTTGTTTAAGTattgataatgataattctGACAACAATGTGGAAGATAACGTTAGCCATAAAGATAATAGAATACTGTGCCCATTATGTGGTGATACATTTGAAAGTTTCAAAGGCATGAGGATACATGCAAGTAGGCATCAGAAGGAGCAGTTGGAGGCAGGATCAGTTGAACCTCAGGTGGATGGCAATAACAATTGTATCTCATGCTCAATATGTGGCAACACCTTTAAAACTCTCAAGGGTATGTGGATACATGCAAGAATCCATCAGAAGGACCAGCCCAGGTCAGCATCAGTTGAACCTAAGGCAGATAAAAATGACCATAATAGAGATGACAATTGTATATCAAGTTCAATTTACGATGAAACCTGTAAAACCTTAAAAGGTATGCGGATACGTGCAAGTAAGCATCAAGGGAAACAGTCCAGGGCTGCGTCAATTGAACCTGAGACAGATGAAAATGGCGATGCAAATGGAGGCAACAAATGCATATCATGCTCAATATGTGGCAATATCTTTGAAACCTTCAGGGGTATGCGAATACATGCAAATAGGCACAAAAGGGAGCCGTCTAGAGCAGCATCAATGTTGGCATTAGAAGGAGATAAAAATGATTATAATAATCGAAATATTCCTAATTATGAATGCAACAATGATtccattaattttaaagaaCGACGTAGAAATAAAGCTGTCATCCATAGAAGGAAATCAATGGACTGCATTGAAACATATAAGGATACTTCTTCAGCTCGTAAAATATATCAATGCCAGTTTTGTCTTGCGCAGTATAGTTTGCAACAATCTTATGCTTCACACATGAAAATCCACAAACATGTCACTCTTGAAGACACAATGAAGTGTAACATGTGTGGAAAGTTTTTTACGCACAAAAAATCACTTACCCAACATATACTAAAACACATGAATGGTAAGATTACCAAGAATAAGGTCGATCTAAGCTCCTTTCAGTGCCCCTTCTGTTCCACACCATTCCCAGATCGCCAGAGTCTGACTTTACATCAAAAGCTACATGAGGAATCATCATCCAAATCACATATTTTATCATCAAAATCTGAAGTAGCTGAGCAGAAACGGATTGCTAATCAATCGCTGCTAAACGTCTTGCCAGCTAAACGACGTCATAGTGAGTCAGCAGCAACAGGGATGGAAAGGGCATTGCATCTGACCAGATACAGAAAACGTATGCGTAAAATGTGCAATCTGGAGGTATTGAAGAAGTCAAATTTAGGTTCACATATGAGATTACGCACAAGAACAAGGTTGCCTGATCAAGTTAGAAATACTTGTGTAAGCGAGTTGGAGTCAAGGTTAGTAGAGCAGTCACCCGGACAATCTGTGGGAGAGCCATCTGAATGCCAGCATGATGAAAAGAATTTTACAGATAAACCATTGCCAGCTGATTGTACGAGCCACCACAAGCATATGTCGCTGAAATCGCAGGGAAACGATTCAAGGACGGATGTTGCTGATAATGTGGTAGAGTTGGATGAACATGCAGTTGAGCAGCAAATTGAGAGGCCCACCGACGAGTATTTTGTATTTGAGAAATGTGAGGGTAATGTATACCAATGTAGCGAGTGCGACCAAACACACAACAACAAGCTACAGCTGATTGTGCACATGTCAACTCATCTGAGCAAGCGTTGGGCCATTGGTCACCGAGAATCGTTGCTTATTCAAGTAGATCCGGTCATAATGGCGCCGTATGCATGCAAATTCTGCGACGAACGTTTTGTGAACAAATTGTACCGAAGCTGCCATTTGCGGAAATGGCACCCGACTGACGTGCTGCAGTGTGACCTATGTCACATGTTGTTTTTGAGCAAGGGAAAGCTGGAGACGCATTGTCAACTACACTTACCCAACAAGTACCAGTGCGAACGTTGTCTCAAGCGTTTCTCCTCCATGTGGTTTTTGAAGAGGCATTTGCGTATGAAATGTGCTGGAAAATCGTTGCCTGCAGTGGAGaagATGGTTCTACCGAAAACGGGCGTTCAGTCGCTATCTCAACTGTCGATTAATCACCGGTGCCAATTCTGCGGATTGCTAGTGAACGATGAAGACGAATTTTTAGGGCATCTGCAAAGCCATGCACACAAATACAAATGTAATAATTGCCAGTTTCAATGCGAGAATATCTTCGAGTTAGAATCTCACGCCTGTATAATTAGTACAACTGAATGA
- Protein Sequence
- MGDTEIKFPNDVFKIKDRVGNLPFAFQQDDITMKANWNKIPIFMNSEKSSVSTEYKLTYSISTAESENEIANECLMDEVNYRLHIDNDDEEDQDLMTGSNLSTQFSCSDNINVAADNTGEKENSLQHWVQNSVNIHSDNHLAAADLQENFTLPDIKNNIVDSKIDESITIKPLAKIITSIKGQINLFKCEFCQKQFSSKLEHKFHITSHPMMFLKQDKNNCMVMMQNDVPSNVAADLKGGTSSNYVCQKCKKQFADQITLTVHCQTFHETDSLKQPSENCSTRSSSTISDVFMHSDNNNNTGVIVVATGNTTFETGVTGDNSTNMNANKNSEDYIMKQYKCYICDKQFARHSSLVSHIQFHEIFTLEKLKKNNQDRENSLTRSSIGEITKSPILDKDHFIWCQVCNKTYKSQFAFRRHMVTHNSLNCEEFNGADSRFNQNSEHNKHCLKASMAVTDEGSDSSRNYHISISNEYTNMLHQVNNDEPLPLHHQHSIKFKCSSCNQCFTTKDKMKKHAEMFCKALATTVNLEEANGKNADENVIKTFRCKFCTSQFWTESNLKIHYKSHHQLDSTDIVNNNVMLNDALTNKIYIEKDDGTFQCVLCDRKFKTHRGVIQHTGYHMNAELEQLCGSCLSIDNDNSDNNVEDNVSHKDNRILCPLCGDTFESFKGMRIHASRHQKEQLEAGSVEPQVDGNNNCISCSICGNTFKTLKGMWIHARIHQKDQPRSASVEPKADKNDHNRDDNCISSSIYDETCKTLKGMRIRASKHQGKQSRAASIEPETDENGDANGGNKCISCSICGNIFETFRGMRIHANRHKREPSRAASMLALEGDKNDYNNRNIPNYECNNDSINFKERRRNKAVIHRRKSMDCIETYKDTSSARKIYQCQFCLAQYSLQQSYASHMKIHKHVTLEDTMKCNMCGKFFTHKKSLTQHILKHMNGKITKNKVDLSSFQCPFCSTPFPDRQSLTLHQKLHEESSSKSHILSSKSEVAEQKRIANQSLLNVLPAKRRHSESAATGMERALHLTRYRKRMRKMCNLEVLKKSNLGSHMRLRTRTRLPDQVRNTCVSELESRLVEQSPGQSVGEPSECQHDEKNFTDKPLPADCTSHHKHMSLKSQGNDSRTDVADNVVELDEHAVEQQIERPTDEYFVFEKCEGNVYQCSECDQTHNNKLQLIVHMSTHLSKRWAIGHRESLLIQVDPVIMAPYACKFCDERFVNKLYRSCHLRKWHPTDVLQCDLCHMLFLSKGKLETHCQLHLPNKYQCERCLKRFSSMWFLKRHLRMKCAGKSLPAVEKMVLPKTGVQSLSQLSINHRCQFCGLLVNDEDEFLGHLQSHAHKYKCNNCQFQCENIFELESHACIISTTE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -