Epel005195.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- Zfy2
- Assembly
- GCA_011428145.1
- Location
- WOFM01000116.1:1719435-1767036[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00091 0.16 13.4 0.8 3 21 143 161 141 162 0.95 2 13 0.3 54 5.4 9.3 1 19 170 188 170 193 0.90 3 13 0.0058 1 10.8 0.8 1 21 265 286 265 287 0.95 4 13 0.029 5.2 8.6 0.7 1 16 295 310 295 312 0.92 5 13 6.2e-05 0.011 17.0 1.7 1 21 331 352 331 353 0.95 6 13 0.00023 0.041 15.2 4.0 2 21 399 419 398 420 0.93 7 13 0.0053 0.95 10.9 1.8 3 21 451 470 449 471 0.93 8 13 3e-06 0.00054 21.2 3.0 1 23 479 502 479 502 0.96 9 13 0.002 0.36 12.3 7.1 1 21 525 546 525 547 0.94 10 13 1.9e-05 0.0034 18.6 0.5 1 23 555 578 555 578 0.96 11 13 0.0081 1.4 10.4 0.7 1 21 599 620 599 621 0.96 12 13 0.0049 0.88 11.1 1.2 1 21 649 670 649 671 0.93 13 13 2.1e-05 0.0038 18.5 0.1 1 23 679 702 679 702 0.94
Sequence Information
- Coding Sequence
- ATGCGACTCACATTTGTGAGCCACGAGATTTCCTTGCAGACACTTAACTGGAGAAGTTACGGAAGCGACACATACTTCGGAGTCATCGGAAGAGATGACGCCAGAAAGAAAATGTCAAGAAGCAACTGTTACTTCGAAGCTGTGAAAGCCAGTTTTGCACCATTTACACAACTTTCTTCTCAGTCACTTTCGGAAAAAGTAATGGAAGGGACTAGTGCTCAGCAATCTGGAGTGATAATGTATCCGCCATCTCCTCCTCATTTACCGACAGGATTTATACTTGAGGTCTGTCTTGCTTCTCAGTCACCTGCAAGACAAACCCTAGAAGCAAAATTGCACTATTCGTACGGCGAATACGTGTACTTTACGACGCCTGCATTGCCTTCGAAAAAGTCGACTTTCATAATTACGAACTCCGGATATGGTTGCCCACAGTGTGGCAACGTCTACAAGCACAAAACCAGCTTGTATAAGCACCTAAAATATGAATgccagaaagaaaaacaattccaGTGTTTATGTTGTCAGAAAAAATTCGCCCGAAAAAGTCACCTTCAAAATCACTGCAAATTCGTGCATGACCTGGATTTGTCGAACTTGGCTGTGGACGTATATTCAACTGCTTCGAGTGATGCAGGACAAAATAATACTTGTGAGGCTGATTCGTTCACCATCCACGAGATGATGATCGAAAACGTCGTCACACCGTTCACCTTCCTCGATGTGTGCCGCAAATGGGACGTTGGTCGTCCTCATCGTCGTACCACCAACAAATACGTCGAAGAAGGCGAGTTCGAGTGTCCCAATGGATGTGGTCGAGTGTATCATCTGAAAAATTCTCTATACAAACACTTGAAATTCGATTGCGGAGTAGAAAAACAATTCGAGTGCTACGTATGCCGAAAGCAGTTCTCACGCAAAACGAATATGCTCAGCCCATTTCTCGTTGGACAGTTATCATTTTTCGATCCGGATTCGTTAGAGGCCGTGTACAATTGTCCTAAAAATTGCGGCCGTCGTTACCGCAGTAAATATAGTCTGAAGAACCATTTAAAGTACGAATGTGGTGTAGAACGCAAGTTCAAATGTGTCGATTGCGGCCcATTAATTTTACGTATGTGCGAACCAGCATTGGATAGAAGTCTGAACTCTCCAGGTGGCTTGAACTATCAGTTTGCTAATTATGACGTGGTCTACTGCCCAAATAATTGTGGTCGTAAATACAAACACAAACACCACCTAAACAGGCATCTGAAGTACGAATGCGGTGTGCACAAGCAATTCCGATGCGATGAATTCACTGGTCGCCGTAAATCATTATCGGTATCCGATGAAGCATGTATTGTCCATTGTCCCAACAACTGTGGCCGTAAATACAAACACGATGCTAGTCTACGAAAACACCTAAAATTCGAATGCGGCGTGGAGAAGCAGTTTCGATGTGTCCATTGTGGTAAAATGTTTACTCAGAAAGCGCATTTACTCTCTCATTTGTTAAATATTCATAAAGTAGTAATATTTAAAAGTTGGATTGAGACGGCTGGTGACcaagaattattttctttgcaatTCCATCACTGTCCAAATGGTTGCGGTCGCAAGTACAAGCGGTCGTGTCACTTGAAAAGGCATTTGAAATACGAGTGTGGTGTGAGACCTCAGTTCAGTTGTGTTATATGTTTGAAAGAATTCTCGCGAAGAAGTACACTGAAAACGCATCTAGCAATGGTGCATGGCGCCAACGTGATCAGCCGAAACAGACATATTGTGGAGAATATAGATCCCGAACAATTGTATCGTTGTCCCAATAATTGTGGTCGTGTCTATGCAATCAAGTTCAGCCTTTATTCGCATTTGAAACACGAATGTGGTGTTCCTAGAAGATTCAACTGCACTATTTGTCTTTGGCCCATAACGTCTTTAACCGAAAACGATTCCGGGGTGCATTTTTGTCCCAATCTGTGTGGTCGCAAGTACAAAAGCTCGAAGGCTATGAAAGCACATTTAAAATTCGAATGTGGAGTTCAAAAACAGTTCGTGTGCGTCGTTTGTGGAAAGTCGTTCGCTTTGAAAGGAACTCTTAAAATTCACATGGTGAATGTTCATAAACGATTAAATCTCTAG
- Protein Sequence
- MRLTFVSHEISLQTLNWRSYGSDTYFGVIGRDDARKKMSRSNCYFEAVKASFAPFTQLSSQSLSEKVMEGTSAQQSGVIMYPPSPPHLPTGFILEVCLASQSPARQTLEAKLHYSYGEYVYFTTPALPSKKSTFIITNSGYGCPQCGNVYKHKTSLYKHLKYECQKEKQFQCLCCQKKFARKSHLQNHCKFVHDLDLSNLAVDVYSTASSDAGQNNTCEADSFTIHEMMIENVVTPFTFLDVCRKWDVGRPHRRTTNKYVEEGEFECPNGCGRVYHLKNSLYKHLKFDCGVEKQFECYVCRKQFSRKTNMLSPFLVGQLSFFDPDSLEAVYNCPKNCGRRYRSKYSLKNHLKYECGVERKFKCVDCGPLILRMCEPALDRSLNSPGGLNYQFANYDVVYCPNNCGRKYKHKHHLNRHLKYECGVHKQFRCDEFTGRRKSLSVSDEACIVHCPNNCGRKYKHDASLRKHLKFECGVEKQFRCVHCGKMFTQKAHLLSHLLNIHKVVIFKSWIETAGDQELFSLQFHHCPNGCGRKYKRSCHLKRHLKYECGVRPQFSCVICLKEFSRRSTLKTHLAMVHGANVISRNRHIVENIDPEQLYRCPNNCGRVYAIKFSLYSHLKHECGVPRRFNCTICLWPITSLTENDSGVHFCPNLCGRKYKSSKAMKAHLKFECGVQKQFVCVVCGKSFALKGTLKIHMVNVHKRLNL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -