Basic Information

Insect: Ericerus pela
Gene Symbol: -
Assembly: GCA_011428145.1
Location: WOFM01000419.1:77043-103880[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.2e-05 0.0022 19.2 0.9 1 23 246 268 246 268 0.98

2 9 2.2e-08 4e-06 27.9 2.0 1 23 274 296 274 296 0.97

3 9 1.8e-06 0.00032 21.9 0.4 1 23 302 324 302 324 0.97

4 9 1.4e-06 0.00026 22.2 0.4 1 23 330 352 330 352 0.99

5 9 5.5e-05 0.0099 17.2 1.0 2 23 597 618 596 618 0.96

6 9 2.4e-08 4.3e-06 27.8 1.8 1 23 624 646 624 646 0.98

7 9 0.00044 0.079 14.3 1.7 1 23 652 674 652 674 0.98

8 9 0.00011 0.02 16.3 0.8 1 23 680 702 680 702 0.99

9 9 0.18 32 6.2 1.4 1 23 708 732 708 732 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.2e-05	0.0022	19.2	0.9	1	23	246	268	246	268	0.98
2	9	2.2e-08	4e-06	27.9	2.0	1	23	274	296	274	296	0.97
3	9	1.8e-06	0.00032	21.9	0.4	1	23	302	324	302	324	0.97
4	9	1.4e-06	0.00026	22.2	0.4	1	23	330	352	330	352	0.99
5	9	5.5e-05	0.0099	17.2	1.0	2	23	597	618	596	618	0.96
6	9	2.4e-08	4.3e-06	27.8	1.8	1	23	624	646	624	646	0.98
7	9	0.00044	0.079	14.3	1.7	1	23	652	674	652	674	0.98
8	9	0.00011	0.02	16.3	0.8	1	23	680	702	680	702	0.99
9	9	0.18	32	6.2	1.4	1	23	708	732	708	732	0.94

Sequence Information

Coding Sequence: ATGGAGAGAATGCAGAGCTACGGACCGCCGGGATCACAGTGGACTCCAATGCCTGCACACAATACACCTCCTAACGGATACAATTTGGCTAcccagcagcagcaacagcaacaacagtCACAAACGGCGTCATCGTCGACCCTACCAAACCAACATACGCAGAACCCAGAAAGTCCTGAAAATCGTGGCATACCAGTGGCCTCATCAGATAAGAGCACCACAACGCAAACCGATTCGCAGCGGCCATCTCAATCGTCGATCACCTCACCTGCGGCATCACCATATCCATCGGCTAATTGCTCAGTAACCGGCGGTGACGACGAACAAATGGCTTCCCAGCAAACGTCGACGAATTCGCCGGACACGCACACCAGCGACGGCTCGGAACGCAATCCGCACTGCGACATGGCGTATTATTCGCGCAGCCACGTACTCAGTCCGGGCAGTTTCATGTCCTACCTAAAGCAGCCGGGCGTCATGCTGACGCCGCTCAATCCGGCCGAAGCGTCCGGCGACTTCCCGAACATACCGCCCGAGTTACTCAACgcacagcaacagcaacagcagcagcaaaaCGGCGGCGGCAGCGGTGGTGGCGCCACCGGCCTCATAATTAAATCGTCATCGTCGCACCACAGTAAAAGCGGCGTCGGAAGCGGTACCAGCGGTGGAGgaggtggcggcggcggcggcggcggtggtggAGGCGGCGATGGCGGCGACGCATCGCGCATGTTCAAGTGTTTGGCGTGCGGCAAAGATTTTCGCCAAAAGTCGACGCTGCTGCAGCATGAACGCATCCACACGGACGCGCGTCCGTTCGCGTGCGGCGACTGCGGCAAACGCTTTCGCCAGCAGTCGCACCTAACGCAGCATCTGCGTATTCACGCCAACGAGAAGCCGTTCGCCTGCCCGTACTGCGACCGCACCTTTCGCCAGCGCGCCATCCTCAACCAGCATATGCGCATCCACTCGGGTGAGAAGCCGTACGTGTGCGCCGAGTGTGGAAAGAGGTTTCGTCAGAAGGCCATCCTCAACCAGCACATTCGTACTCACCAGGCGGACCAGTTTCCGGCCTCGTGTCCGACCACCCACTTCTTGACCGCCGTCATCGGCGAcggcggcgacgacgacgacgacgtcatGTCCgacggtggcggcggcggcggcgatgGCGACGACGATAGCGAGGAGGGCGCTGTCGTTGGCGGCGGCCCCCAAGCACGTCAtcgcggcggcggcggcggcggcggcggcggtggtggtggtggcggcggcggcggcgctGCTGGTCTAATTGGTAGTAGTCGAACTGGTGGTAGTAGTGGTGGAGGTGTCGGTGGTGACGATAATGATGACGGTGGTATTGTTGTTGTGGCTAAGAGGCTGCATCAGGGCGAGCAGCACAGCGTGTTGTTGCAATACGGCGGCGGCGtcggcagcggcggcggcggcgaccaCCATCGCCGCGGCGTCGTCAAAGGTGACGCCGCTCTGACCGCCACCCTAAAGCTAGGCCATAATCATAAAGATGCCGGTTCGCATTTAATTTACAAGAATGGTCAACTTTGGCCGCAAGAAGTTTATGTTCAGCATAAATCGtcaaattacaataataataataacaataacaatgaACAAGCGTGTTATTCACCAGAGAGTTCGGCGCAATTTCCCGCCTATTTCAAAGATTCTAAAgGTATTGCACACGGTATCTTCGGCAACACAGGTAAAAGCCTACCAGAAGTGATCCAGCAGGGGCGTAGTGCCGGCATGCCACTGTACGTACGTTGCCCTATCTGCCAGGAGGAGTTTAAGCAGAAATCGACGTTGCTGCAACACGGCTGCGTGCATATCGAGTCGCGTCCTTATCCGTGCGTCGAGTGCGGCAAACGTTTTCGTCAGCAGTCGCATCTTACGCAGCATCTTCGTATCCACACCAACGAGAAACCGTTCCCCTGCCTGTATTGCAGGCGGACCTTTCGCCAGCGTACCATCCTCAACCAGCATCTGCGCATCCACACCGGTGAAAAACCCTACAAGTGCGCCCAGTGCGGCAAAGACTTCCGCCAGAAGGCGATCCTTGACCAGCATACGCGCACCCACCAAGGCGAGCGACCCTTCTGCTGCCCGATGCCAAGTTGTCGGCGACGCTTCGGCACTGAGCAAGAGGTGAAACGTCACCTTGACAATCACATGAATCCAAACTCGTCCAAGAAGCGTATGACACTCGAGAGTAAAATGAGGCCTCTAGGGCCGGGCGTGATGCTAAATGCTCACGCCACCATGGTCAAGCCGGAGCTTTACTTCCCGCAGTGCTACTTCAATCAGCAACAGCAACAGTATCCGTCGCCACGTGCTGCCCAGCAACAGCAGTCTGCGCAGCAGCAGACTGCCGTCCAGCAGCAACAACAAGCGCAGACAACCGTCAACCACAATGGCACGGAATTCAAAGGATCTCAGGGTTCGTTACCAGTCGGAGCCTCTCAGTCACAAGTTATGGTAGCGCATAACGCCGAATTTAAACCACCATCTCCGATACTCGCCCCACCAATAGCGGTTGTGCAATAG
Protein Sequence: MERMQSYGPPGSQWTPMPAHNTPPNGYNLATQQQQQQQQSQTASSSTLPNQHTQNPESPENRGIPVASSDKSTTTQTDSQRPSQSSITSPAASPYPSANCSVTGGDDEQMASQQTSTNSPDTHTSDGSERNPHCDMAYYSRSHVLSPGSFMSYLKQPGVMLTPLNPAEASGDFPNIPPELLNAQQQQQQQQNGGGSGGGATGLIIKSSSSHHSKSGVGSGTSGGGGGGGGGGGGGGGDGGDASRMFKCLACGKDFRQKSTLLQHERIHTDARPFACGDCGKRFRQQSHLTQHLRIHANEKPFACPYCDRTFRQRAILNQHMRIHSGEKPYVCAECGKRFRQKAILNQHIRTHQADQFPASCPTTHFLTAVIGDGGDDDDDVMSDGGGGGGDGDDDSEEGAVVGGGPQARHRGGGGGGGGGGGGGGGGGAAGLIGSSRTGGSSGGGVGGDDNDDGGIVVVAKRLHQGEQHSVLLQYGGGVGSGGGGDHHRRGVVKGDAALTATLKLGHNHKDAGSHLIYKNGQLWPQEVYVQHKSSNYNNNNNNNNEQACYSPESSAQFPAYFKDSKGIAHGIFGNTGKSLPEVIQQGRSAGMPLYVRCPICQEEFKQKSTLLQHGCVHIESRPYPCVECGKRFRQQSHLTQHLRIHTNEKPFPCLYCRRTFRQRTILNQHLRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGERPFCCPMPSCRRRFGTEQEVKRHLDNHMNPNSSKKRMTLESKMRPLGPGVMLNAHATMVKPELYFPQCYFNQQQQQYPSPRAAQQQQSAQQQTAVQQQQQAQTTVNHNGTEFKGSQGSLPVGASQSQVMVAHNAEFKPPSPILAPPIAVVQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -