Basic Information

Insect: Ericerus pela
Gene Symbol: -
Assembly: GCA_011428145.1
Location: WOFM01000296.1:190006-204592[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0012 0.21 13.0 0.8 2 23 138 159 137 159 0.94

2 12 8.4e-06 0.0015 19.8 0.7 1 23 165 187 165 187 0.98

3 12 0.00045 0.08 14.3 1.2 1 23 193 215 193 215 0.91

4 12 4.3e-06 0.00077 20.7 2.1 1 23 221 243 221 243 0.98

5 12 1.1e-07 2e-05 25.7 1.0 1 23 249 271 249 271 0.99

6 12 2.8e-05 0.005 18.1 0.2 1 23 277 299 277 299 0.97

7 12 0.00043 0.077 14.4 0.2 2 23 306 327 305 327 0.95

8 12 1.1e-06 0.00019 22.6 5.3 1 23 334 356 334 357 0.95

9 12 1.8e-05 0.0033 18.7 3.8 1 23 426 448 426 448 0.98

10 12 3.7e-05 0.0067 17.7 0.6 3 23 456 476 454 476 0.96

11 12 4e-07 7.1e-05 23.9 2.9 1 23 482 504 482 504 0.98

12 12 0.015 2.7 9.6 0.6 1 20 513 532 513 532 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0012	0.21	13.0	0.8	2	23	138	159	137	159	0.94
2	12	8.4e-06	0.0015	19.8	0.7	1	23	165	187	165	187	0.98
3	12	0.00045	0.08	14.3	1.2	1	23	193	215	193	215	0.91
4	12	4.3e-06	0.00077	20.7	2.1	1	23	221	243	221	243	0.98
5	12	1.1e-07	2e-05	25.7	1.0	1	23	249	271	249	271	0.99
6	12	2.8e-05	0.005	18.1	0.2	1	23	277	299	277	299	0.97
7	12	0.00043	0.077	14.4	0.2	2	23	306	327	305	327	0.95
8	12	1.1e-06	0.00019	22.6	5.3	1	23	334	356	334	357	0.95
9	12	1.8e-05	0.0033	18.7	3.8	1	23	426	448	426	448	0.98
10	12	3.7e-05	0.0067	17.7	0.6	3	23	456	476	454	476	0.96
11	12	4e-07	7.1e-05	23.9	2.9	1	23	482	504	482	504	0.98
12	12	0.015	2.7	9.6	0.6	1	20	513	532	513	532	0.96

Sequence Information

Coding Sequence: ATGGATAAACTACCGAATTTTATTTGCAAAACCTGTTCGATGAAAATTGTTCGAGCTTTTGAATTCCGTCAGCAAGCTAAGCGATCGGATGAAATTTTACGAAGATTTGTTGAAGAGAAGaTGAGCTCCGAACAGTTGGAAGTTGAGCCACTAAGCTACGTAAAAGTTGAACATGAAGATGAGGATGAGAACTTGGACATACTGAATGGCGAATGCGACGGTGAAGAAACTAATGACGAGCAAAATTTAATCGCAGATGTCGATCCGTCGGCCTCCATGCTGGACGATGATGACTCCGAAGAGGACCAAGTGAGTCCACCGAATGCTCAAATGATGGAACACGAATTCGAGCCAGCTTGGATGAATAATGGTAACGACGACACTGAAACCACGGAGCCGAAGAGCCCCTGGAATTGTCAATACTGCAATACGACGTTTCCGAACGAAGATAGATACAAGCGGCATTCATTAATTCATACATCAGAACCACCGTTTCCCTGTGATTATTGCGACGAATGTTTCGATTTGAGAACCGATTTGAAAGCACATTGGCGGGTGCATAGTGATGGTAATCCACATATTTGTCAAATGTGTGGGAAATCGTTTCCAGATCGCATGTCGTACCTTAAGCACTCGGATCTTCATGATCAAGTTAAACCATTCCGTTGTCCTGTTTGTCAGAAATCATTTTGCTATGGTTCTGATCTACGAAAACATGCCATCACTCATACGGGTATCAGACCATATGTTTGTTCGGTGTGCGGTAATTCGTTTACGAGGAGTACCAGTTTGAATAAACATCTGCGGATGCACAATGGCAACAGACCATTTTCGTGTACGGCgtgtccaaaaatttttggatcacgCGGTGATTTAAAACGTCATCAGATCATTCACAGTGGCATAAAGCCGTGGATTTGTACCGTATGTTCGGTGCCGTTTAATCGTAAAGATAAGTTGGTGCGCCACGAAAAATTGCATTCTGGTGAACCGAGACCATTTCGGTGCCACGAGTGTCCAACGTCATTCAGTCGAAAAGAAGATTTAACGAAACATATTCAGTTTCACCATTATAAAccgAAATCGGATCTGGAACGCGGTAACCGAACGTTTAGAGCGTTAATTAAAGAGGCATTTAGCGGTAATCAAACGAGCGGTTGGAATCAGTCAGCTACGGCTGCTACACCCGTTCCAGCAGTTACTGGTGCCACCGTTGTTACAGCATCACCATCTATTTCAGCTGCCTTAACGGCGGCCGCGGCCGAAGAGATGCCATTCAAGTGCGACATTTGTCACAAAAAGTTTAACCAAAAAGCGTCGTTAGATTCGCATAAGAAAATCCACACGGCCGTCAAGCCGTACGGCTGTTCGATGTGCGAAAAATCGTTTTACCGTCGACGCGAGTTGACGCGACACGAGGCCGTTCACACGGGCTACAAGCCGTTTTCCTGCGGCGTTTGCGGAAAGTGTTTTTCGCGCAccgacaaactgaatcgtcacGTGCAGACCCACCagtataaaagtatttttcgtAATTACCACTGCGAAGCGTGCTCGCTGAATTTCCGCACCGAGGTGGAGCTGCAGAAACATCAGCCGCTTTGCAAACCGGAGCCGAAGCAAATGGCGCTAACGGCCCAGGTGCCCGACGATAGCGAAGGTCTGTATCCGGAGGTGATGGTCAAAGAGGAGCCCATCGACGAAGAGGAAATAGAGTACGTGAACGACGACTACGAATACCATATGGATCCGCAAGAAACGCTGTCGAGATTGGGCAAAAATCCTGAAATCGTGTTACTCCCAATTAAATAG
Protein Sequence: MDKLPNFICKTCSMKIVRAFEFRQQAKRSDEILRRFVEEKMSSEQLEVEPLSYVKVEHEDEDENLDILNGECDGEETNDEQNLIADVDPSASMLDDDDSEEDQVSPPNAQMMEHEFEPAWMNNGNDDTETTEPKSPWNCQYCNTTFPNEDRYKRHSLIHTSEPPFPCDYCDECFDLRTDLKAHWRVHSDGNPHICQMCGKSFPDRMSYLKHSDLHDQVKPFRCPVCQKSFCYGSDLRKHAITHTGIRPYVCSVCGNSFTRSTSLNKHLRMHNGNRPFSCTACPKIFGSRGDLKRHQIIHSGIKPWICTVCSVPFNRKDKLVRHEKLHSGEPRPFRCHECPTSFSRKEDLTKHIQFHHYKPKSDLERGNRTFRALIKEAFSGNQTSGWNQSATAATPVPAVTGATVVTASPSISAALTAAAAEEMPFKCDICHKKFNQKASLDSHKKIHTAVKPYGCSMCEKSFYRRRELTRHEAVHTGYKPFSCGVCGKCFSRTDKLNRHVQTHQYKSIFRNYHCEACSLNFRTEVELQKHQPLCKPEPKQMALTAQVPDDSEGLYPEVMVKEEPIDEEEIEYVNDDYEYHMDPQETLSRLGKNPEIVLLPIK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -