Basic Information

Insect: Ericerus pela
Gene Symbol: -
Assembly: GCA_011428145.1
Location: WOFM01000887.1:96535-104491[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3e-05 0.0076 17.6 1.6 1 23 402 424 402 424 0.98

2 18 0.00011 0.019 16.3 1.9 1 20 430 449 430 452 0.93

3 18 4.7e-05 0.0084 17.4 1.8 1 23 458 480 458 480 0.99

4 18 0.00017 0.029 15.7 5.0 1 21 486 506 486 508 0.95

5 18 6.5e-05 0.012 17.0 8.3 1 23 514 536 514 536 0.99

6 18 2.3e-05 0.0041 18.4 4.8 1 23 542 564 542 564 0.97

7 18 3.4e-06 0.00061 21.0 5.1 1 23 570 592 570 592 0.98

8 18 5.2e-08 9.3e-06 26.7 2.8 1 23 598 620 598 620 0.98

9 18 5.1e-05 0.0092 17.3 6.7 1 23 626 648 626 648 0.97

10 18 3e-06 0.00054 21.2 6.8 1 23 654 676 654 676 0.98

11 18 9.7e-07 0.00017 22.7 2.9 1 23 682 704 682 704 0.98

12 18 3.1e-07 5.4e-05 24.3 6.7 1 23 710 732 710 732 0.98

13 18 2.2e-05 0.004 18.4 7.7 1 23 738 760 738 760 0.98

14 18 6.6e-06 0.0012 20.1 7.7 1 23 766 788 766 788 0.98

15 18 2.7e-06 0.00047 21.3 4.6 1 23 794 816 794 816 0.97

16 18 5.7e-05 0.01 17.1 0.5 1 23 822 844 822 844 0.97

17 18 0.00061 0.11 13.9 4.6 1 23 854 876 854 876 0.99

18 18 7.9e-06 0.0014 19.8 4.5 1 23 882 905 882 905 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3e-05	0.0076	17.6	1.6	1	23	402	424	402	424	0.98
2	18	0.00011	0.019	16.3	1.9	1	20	430	449	430	452	0.93
3	18	4.7e-05	0.0084	17.4	1.8	1	23	458	480	458	480	0.99
4	18	0.00017	0.029	15.7	5.0	1	21	486	506	486	508	0.95
5	18	6.5e-05	0.012	17.0	8.3	1	23	514	536	514	536	0.99
6	18	2.3e-05	0.0041	18.4	4.8	1	23	542	564	542	564	0.97
7	18	3.4e-06	0.00061	21.0	5.1	1	23	570	592	570	592	0.98
8	18	5.2e-08	9.3e-06	26.7	2.8	1	23	598	620	598	620	0.98
9	18	5.1e-05	0.0092	17.3	6.7	1	23	626	648	626	648	0.97
10	18	3e-06	0.00054	21.2	6.8	1	23	654	676	654	676	0.98
11	18	9.7e-07	0.00017	22.7	2.9	1	23	682	704	682	704	0.98
12	18	3.1e-07	5.4e-05	24.3	6.7	1	23	710	732	710	732	0.98
13	18	2.2e-05	0.004	18.4	7.7	1	23	738	760	738	760	0.98
14	18	6.6e-06	0.0012	20.1	7.7	1	23	766	788	766	788	0.98
15	18	2.7e-06	0.00047	21.3	4.6	1	23	794	816	794	816	0.97
16	18	5.7e-05	0.01	17.1	0.5	1	23	822	844	822	844	0.97
17	18	0.00061	0.11	13.9	4.6	1	23	854	876	854	876	0.99
18	18	7.9e-06	0.0014	19.8	4.5	1	23	882	905	882	905	0.97

Sequence Information

Coding Sequence: atgaataatgaaactcACAGTTCCGTTCCATCCTCATCTGCATCTTCTGTTTCGAACCAgGAGGCTGCTGTGGGGATGCAGCATGATCGGCCATCAACATCAGATTCGATCCGATTACCATTATCATCAGGTACAACCACAATGACTCTTCCCAGTGGATTCAATAAGTATTGGATTCTGACCAATTTCGTTCCTGGCCAAATTCCTCaagtttcaaCTGTTTACACATTACCTACCTCGACTGCTTCAAGAATAGAAGACAGTAAAGGCGCTAGTCCTTCTACACAGGCTTGCTTGAGTGCAATTCCTTCCAGTGAAACTTTAATTACTGAACATAGGGCCACTTCTTCGCCTACGCATCAGaatcaaAATCGTGCTGTTTCTATAACGTCATCTTCCCACCAATCCAATGACAAATCGAAAATGGATAAAGCTACATGCACCGATAGCATAGAAAATAATCAGCTTCATTGTCAGCAGCAGGTGATTCATTGTGAATTAGCAGTTGTAAATGGAGAGAACCGTCAGCAACCACAGATGATTGGATCTCTCACACCTCAGCAACATCAGCAACTTCAAGAGCAGATGGCACATCATCAGGCTCTGACTCAACATCAAGCTTCCTCATCTGGTCATCAAGATATTTACCAAAGCCGGACAGTTTCCAGTAACAATATTAAACCGGATGAAAATCGGAAAAACGCTTCGTCATCACAAATTGATGTTAAAGAAGAACATGCGCATTCTAATCgtgaaaaaaatacagaaaacagATTACCAGTCATTTCCATGACTTCTGGAATTCAAGAAGTGAAATCTGAGCATATGATCGATATTCGTGCAATCGACGGGCAGATTGTTAAATTGAATGCTCACGAAACCGCTGAAGGCGGTAACAAAACACTGGATTTAGTACCTAGCATGTACAAAGTGAATATTGAAGACATTAACCAGCTATTGTATCACGAGGTTTTTGGAAAGTTGCAGCCTACCAATTCGTCAAATTTATCGAGTAGCGGTGATCAGTCGCAACAACATTCGCCAACCGTAGCCATATTACACAACTCATCCGGTATGGTAGTGAAATCATGTGAACAATTGACTTCGGATGGAACGTCTAACACAGTGTTGAGTACCGATTTGAGCATGTCTAATAGTTCCAATTCGACTTCCCCGTCTCCGGTTATCGTTCCTACTGGAACACATACGTGCGACATTTGTGGGAAAATATTCCCATTCCGCTATCAAATGATCGTACATCGACGTTATCATGCCGAGAAGAAGCCGTTTACTTGTCAGGTTTGCGGAAAATCATTTGAAAGTAACGATGACCTACTTAGTCATGGTAAATGCCATCTCGGTGGCAGCATGTACACATGTAACATGTGTTTTCATGTATTTGCCAACGAAGAAAGCCTCGAACGGCACGTCAAACGTCACTCCACGGACAAACCATACGCCTGTCCAACATGTGCCAAATGTTTTGCCCGCAAAGAGCACCTCGAGAACCACATACGCTGTCACACTGGCGACACACCATATCGTTGCCAGTACTGTCATAAGTTCTTCACGCGCAAGGAGCACATGGTGAATCACGTGCGCAAACATACCGGCGAAACGCCCCACCGTTGCGACATTTGCAAGAAATCGTTCACGCGCAAAGAGCACTTTGTCAACCACGTTATGTGGCATACTGGCGAAACACCGCACACTTGTCGCATCTGTGGCAAAAAGTACACGCGCAAAGAGCATCTGGCCAATCATTTGCGTTCGCACACCAACGACACTCCGTTCAAATGCGAAATCTGTGGCAAATCATTCACGCGCAAAGAGCACTTTACCAATCACATAATGTGGCACACTGGCGAAACGCCTCATCGTTGCGATTTCTGCTCGAAAACGTTTACGCGTAAGGAGCACCTGCTGAACCACGTGCGCCAGCATACGGGTGAATCACCGCACCGTTGCACCTACTGCACGAAGTCTTTTACCCGCAAGGAGCACTTGGTGAACCACATTCGCCAGCACACCGGTGAAACGCCGTTCCAGTGTACATTCTGTCCGAAAGCGTTCACGCGCAAGGACCACCTGGTAAACCACGTGCGTCAGCATACCGGCGAGTCGCCGCACAAATGCACATACTGCCCAAAATCGTTTACGCGCAAGGAGCATCTCACCAACCACATACGCCAGCACACAGGTGAAACGCCACACCGATGCCACTACTGCTCGAAGGGCTTCATGCGCAAGGAGCACCTCACCAACCATATTCGCATTCACACGGGCGAGTCGCCTCACCGCTGCGACTTCTGCAATAAAACGTTCACACGCAAAGAGCACCTGACCAACCATCTGCGCCAGCATTCCGGTGAGACGGAGCACAATTGCACAGTTTGCTCAAAGCCGTTCACGCGCAAAGAGCATCTGGTCAACCATATGCGGTCGCACACCGGCGAACGGCCGTTCGCCTGCACCGAGTGCGGTAAATCGTTCCCGCTGAAAGGCAACTTACTCTTTCATCAACGCTCCCACCAAAAAGGCTTGCCGGCCGAACGTCCGTTCAAGTGCGACATTTGTCCCAAAGATTTTACGTGCAAAGGGCATTTGGTGTCGCACCGGCGCAGCCACTCGAACGAGCGCCCGCATGTGTGTCCGCAGTGCAACAAGTGCTTTGTCGAGAAGTCGAACATGCTGAAGCACATACGCAAAAGCCACAATATGGTGGTGACGCCGGGCTCGGCTCTCATGCCGCCAGGCGTTCTGCCCCCGCATCCAGCTTCTGCGGCGGCCGCCGTCGCCGCCAACAATACGTCGACGTCGACGTCAACGTTGACGTCAATACCGCCGCAGGTGGGTGGGCAGCCGAACACGAACCTACATCACGGCTCTTCGGGGACGAATCCGCTAGCGTTGATTGTGCCGGTACCAAACACTTCCGTACTGGCTACGTATTAA
Protein Sequence: MNNETHSSVPSSSASSVSNQEAAVGMQHDRPSTSDSIRLPLSSGTTTMTLPSGFNKYWILTNFVPGQIPQVSTVYTLPTSTASRIEDSKGASPSTQACLSAIPSSETLITEHRATSSPTHQNQNRAVSITSSSHQSNDKSKMDKATCTDSIENNQLHCQQQVIHCELAVVNGENRQQPQMIGSLTPQQHQQLQEQMAHHQALTQHQASSSGHQDIYQSRTVSSNNIKPDENRKNASSSQIDVKEEHAHSNREKNTENRLPVISMTSGIQEVKSEHMIDIRAIDGQIVKLNAHETAEGGNKTLDLVPSMYKVNIEDINQLLYHEVFGKLQPTNSSNLSSSGDQSQQHSPTVAILHNSSGMVVKSCEQLTSDGTSNTVLSTDLSMSNSSNSTSPSPVIVPTGTHTCDICGKIFPFRYQMIVHRRYHAEKKPFTCQVCGKSFESNDDLLSHGKCHLGGSMYTCNMCFHVFANEESLERHVKRHSTDKPYACPTCAKCFARKEHLENHIRCHTGDTPYRCQYCHKFFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFVNHVMWHTGETPHTCRICGKKYTRKEHLANHLRSHTNDTPFKCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCTKSFTRKEHLVNHIRQHTGETPFQCTFCPKAFTRKDHLVNHVRQHTGESPHKCTYCPKSFTRKEHLTNHIRQHTGETPHRCHYCSKGFMRKEHLTNHIRIHTGESPHRCDFCNKTFTRKEHLTNHLRQHSGETEHNCTVCSKPFTRKEHLVNHMRSHTGERPFACTECGKSFPLKGNLLFHQRSHQKGLPAERPFKCDICPKDFTCKGHLVSHRRSHSNERPHVCPQCNKCFVEKSNMLKHIRKSHNMVVTPGSALMPPGVLPPHPASAAAAVAANNTSTSTSTLTSIPPQVGGQPNTNLHHGSSGTNPLALIVPVPNTSVLATY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -