Epel005058.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- -
- Assembly
- GCA_011428145.1
- Location
- WOFM01000114.1:173138-188948[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 5.5e-06 0.00098 20.4 1.0 2 23 155 176 154 176 0.97 2 32 0.0014 0.25 12.8 2.4 1 23 181 203 181 203 0.98 3 32 0.015 2.6 9.6 1.3 2 21 214 233 213 234 0.93 4 32 0.0012 0.22 13.0 0.3 1 23 239 262 239 262 0.93 5 32 0.22 39 5.9 0.1 2 13 336 347 335 356 0.78 6 32 4.5e-07 8e-05 23.8 1.4 1 21 362 382 362 383 0.95 7 32 0.00048 0.086 14.2 0.6 1 23 390 412 390 412 0.98 8 32 0.00045 0.081 14.3 0.2 1 23 422 445 422 445 0.95 9 32 0.25 44 5.7 2.6 2 23 454 476 453 476 0.93 10 32 0.0097 1.7 10.1 1.7 1 23 484 507 484 507 0.97 11 32 0.00048 0.085 14.2 0.1 2 23 539 561 538 561 0.93 12 32 0.00043 0.078 14.4 0.5 1 20 603 622 603 624 0.93 13 32 1.1e-05 0.0019 19.4 3.2 1 23 633 655 633 655 0.97 14 32 0.011 1.9 10.0 0.1 1 20 664 683 664 685 0.94 15 32 3.1 5.5e+02 2.3 0.4 2 22 688 708 687 710 0.87 16 32 0.0006 0.11 13.9 1.1 1 20 746 765 746 766 0.96 17 32 0.00012 0.022 16.1 2.5 1 23 774 797 774 797 0.95 18 32 0.002 0.36 12.3 0.9 1 23 802 824 802 824 0.93 19 32 0.08 14 7.2 0.1 2 23 1002 1023 1001 1023 0.96 20 32 2.1e-05 0.0038 18.5 2.2 3 23 1030 1050 1028 1050 0.97 21 32 0.00071 0.13 13.7 1.4 2 20 1062 1080 1061 1082 0.93 22 32 0.0051 0.91 11.0 0.2 1 23 1087 1110 1087 1110 0.98 23 32 0.014 2.5 9.7 0.2 2 23 1140 1160 1140 1160 0.96 24 32 0.00037 0.066 14.6 0.0 1 21 1166 1186 1166 1187 0.95 25 32 1.8e-06 0.00033 21.9 0.5 1 23 1194 1216 1194 1216 0.98 26 32 0.00092 0.17 13.3 0.3 1 23 1226 1249 1226 1249 0.96 27 32 0.0016 0.28 12.6 0.4 1 23 1258 1281 1258 1281 0.95 28 32 0.0019 0.35 12.3 3.5 1 23 1288 1311 1288 1312 0.97 29 32 0.00022 0.038 15.3 0.2 1 20 1399 1418 1399 1419 0.95 30 32 0.012 2.2 9.8 0.1 1 23 1427 1450 1427 1450 0.90 31 32 0.0033 0.59 11.6 1.1 1 23 1455 1477 1455 1477 0.96 32 32 0.067 12 7.5 1.0 5 22 1486 1503 1484 1503 0.93
Sequence Information
- Coding Sequence
- ATGGCTCAAGTTAGTAAGAAAATATTGCTCTCCGAGTACGGTGAAGAAGGAGAAGTAGGTATGCCTACTCAAACCTCGTTAATGAAGTATTCCAGCGCAACCAACCAAATAGTCGCAAACTTTGAGAAAGAGTCGCATGATCCTCTGGCCAGGAAATGTATTGTATGTGACGCTGATGTGCAAGACGATGTCAAAAATGACTTACTTTGCGCAACGTGCCTGCAAGAGCAGCCAGATCTTCTGAGACTGCAGACGTGTGATAATGAAACCCTCTTGAAGCATCTCATAAATTTGCCGCATGAAGGTGTTTATTTGCAGTGTGATCTTTGCGATTTTCAGTGTGAACCTGTACCCGAGTTCTTTAACAAACACTACGCCACCCATATAGAACGGGAGACGACTGTTGTTGAATATGACCAGTCTGTAGCCAGTAGTGGTGGCACTACTACTAGCTGTAGTATGCAATGTGATATATGCAAAAAAGCATTTACACAGAAGATCACGTTGATAAGGCATctcaaaaatcatgaaaagaAACTTTTCTCATGTAGCCTGTGTAGCGGCACCTTTAAAACGCAACTGCAGCTAAAAATACACAGGAAACGCCATAAGCGGATATCGCTGAGTAACACGCTAATGTATTGTGAACTGTGCAAGAAATACTTCAAAACGAAAAAAGGGTTCGCCTATCACCAGCAACGTATCTGCGTCTTGTTCAAGTGCTTCATTTGCAACGAATCATTTGCCAATCAATTGGCGCTTGCGCAACATTCCAGCATCAAACACTCAACTGGAGAGCAATCAGTCGAAGAGTGGATGAAGGTAGAGGCAAAGCAGAAAGCATCCGTCAAAGAAGAAAAGCCACCTGAGGTGATGGTGGAACCAAAATGTGCTGAAAAGGATGATGTTGCCATTGGGGAGAGGAGGTTGGAAATtgcaaagaaaatgaaaatagagtTGGTGCAAAGTGTAGCCGCTAGTGTTGCCGACAATTCCATGCGTAGCCGATGCAAAATTTGTGGTAAAGTGGTGACAACGGCGGTGTTGCCGCGCCACATGATCCTGCACAAGGAGGACCGACCGTTCACGTGTGACCTGTGTGGCAAGTGCTTCAAACGCAAGAGCTCACTGCAAGACCACATCATGATTGAGATGGGCATGAAGAACTACGTGTGCGACGTTTGTGGCATGAAGTTTTTGAAGCAGGGCTACCTCAACAAGCACGTACGCTATCATAAGCTTAGCAACGGTGAGTTCCAGGGGTTTGCTTGCGAGCAGTGCGGCAAACGCTTCTCCGAGAAGTGGCGGCTGGGCGTGCACCAGCGGGCTGTCCACAAGGGTGGCCGTTTCTCCAGCTGCAAGTGCGACATATGTGGCGAGCTGTTTGCCGAACGCTACATGGTGAAAATGCACAAACATAAGGCGCACAACGGCGAAGCATTTAGCGAGCACCAGTGTCCAGTGTGCGAGCGCAAATTCCTGGAGAAGTGGATGCTAAAGTCGCACCTGCGCAACACGCATCGCAGCGGCGTGCGCAAGCTGTACTGCGATCTGTGCGGTCGCAGCGACCACGTGGCGCAAGAATGCGCGCATCGGCACACGCTCCGTGAGGTGCCGTGTATGCTGTGTGGGGAAACCTTTTCGTCGAACGTCTCCCTGAAGGAGCACGTGACGTCGGCGCACATTTTCACGTTGAAACGCGAGCTGACCGCCGAGGAAATGGACTCGGCGGCGGCGACAGGGAGTGAGACATTGGATTCGGCGGGAGAAACGGCCACTGCCACCGGTCGCAAGAAAATGGTGCATCACGTGTGCGCCGGATGCGGCAAACATTTCATCAGCAAGCTGAACCTACGCGCGCACGAGACGCGCGAGAATTGCTTCAAGTCGCTGAAGTACGACTGCAGCCATTGCGGCAAAACGTTCACGTCGAAGTTCACGCTCAGCAATCACGTGATGCTACATAAGAAGGCCACCTCCGGACTGCCGTACCAGTGCGAGTTCTGTAGCAAGGATTTCGCCGCCGAAGAGAGCCTGCAGTCGCATCTGGCCATGGAGAAGGTATGTTTACTGTGCGACGCCGTGTATCCATGCAACGATCAGCTGAAAAACCATGTGTTCGGCGATCACAATAACGACGATGACGCTGACGAATGTGCGATTTCGAATCAGCCGGATTACAGCAGCGCCGCCGCCTCCGCCGCGACTACCGGTGAAATAGGTGATCCCAAACCTTTCGAGTGTAAGCTGTGCGGCAAGAAATTTATGCGCAAACAAGCGATGAAGAACCATTTGTTCGCCGAAATGAATCTGCGGCGGTACGTGTGCGAATTCTGCGATAAGAGCTACAACTACTATTCACACCTGAAAGAGCATCTGGTGTCTAGCCACGGCGAGAAGGAGTACCTGTGCGGCTATTGCGGCAAAGACTTCCCAACCAAGAAACGATTTCGCGACCACGTCACCCTGCATTCGGACGAGAAACCGTTTATGTGCGAATGCGGCCAATCATTCAAACTGAGTCGGTCTGTGCGCGCGCAACGCGACGACGAAAATGCAAAAGCGAAGACTGAACCTATATCCGTCGCCgtcgccgccaccgccgccggcAAAGATCGTCGACCTGTTAAAGACGAACTCAATGTGTGCGTCGTTTGTCACGTCAAACACGTCGGCAACTCTGAATTCTGCGACAACTGCTCCAACTTCAAGCCGGTCGAAGTATGGCTCCAGTCTCCGGCGCCGCTGACGACTCTCGCCGACAATTACGACCGTTTTATGGTCGTCCATGACAATGGCATCGCCTACATGAAGTGCGACAAATGCGTGTTCATTTGTCGACCGATAGTCGACGTCTTCTCCAGCCATTATGTGCTGCACTCGACGGACGACGGTGAGGACGGCACCAACGGACATCCGACGCTGTCGGCTACGGCAACCGCCGGCGATTGTCCGGCGGCCGATAACGGCCGCGACGGCGACTTGGACGGTGACATTCTGATGAAGTGCGCCAAATGTAATCAGCTGTTCGCGGACGACGCCACGTTGTCGGCGCACTACTCGATCCACACGCTGCAGAAGCTTGCCTGCAAGGTGTGCAACCGCACCTTCAAGACCAAAGTCAAGTTGCAGATACACAAGCGCAAGCACTCGACCAAGGTGACGGCCACCGCCACAACCATAAAGTGCGGCCGCTGCGACAAGGAGTTCAAAACGCAGTCCGGCTACAAGCACCACCGAGCGAAGGTGTGCGTCGAGTACCGGTGCGAGCTGTGTGGCCAGATATTCTTGGTGAAGTCGTTGCTGAATGGCCACCTGAAAAAGGAGCACGACGTGGAGGTCGCGCAAAAAGAGGAGGTGGCCGGTGGTGGTGCGGCCAGTAGCGCAGGTTCGTCAGCGGCGCGGCGGCCGAGTGGCGTGTGCTCGGTGTGCGGCAAGAAGATCAACGAAAGCGCCATGACCCGGCACATGCAACTGCACTCGGACGAGAAGCCGTACGAGTGCGCCATGTGCGGCAAGCAGTTCCGTATCAAGTGGTCGCTGCGCGAGCACATCATGATCGAGATCGGCATGAAGGACTACGTGTGCGAGGTGTGCGGCAAGAAGTTCGTCATCCAGGCGTACCTCAACAAGCATATGCGCTTCCATCTGATGTGCGACGGCAAATTCGAGGGCTTCCAGTGCGAGATGTGCGGCAAGAAGTTCGCCGAAGAGTGGCGCGTCAAGGAGCACCAGCGTAACGCGCACCGCGCCGCCGAAAAGGGGCGCCAGTACGCGTGCAACCTGTGCGAGCGCAAGTTCGCACGCAAATGGCTGGTGCGCTCGCACAAGCGCGCCGCCCACGACGAATACCTGGAACAGTATCAGTGCGAGCACTGCGCCAAAACGTTCACCGAGAAATGGATGATCAAGTTGCATCTGCAGACGCTGCACCATGAGACGTCCTCATTCGGCCGGCACGTGGATGCGGCGACTGGCGACGAGAAATATGGAGACGGCCAAGAGTACGGCGCCGGTTCCGGCACGTTTGCGTCGTCGCATGTCGTCAACAAGTTGTTCGAATACAACAAAATGATCACCGGAACCGAGAGACGAGGTGCTCGAAGAGATGGCGGTGCTGGTGATGCGAGTGCCGCTGGTGGCTCGTCGTCGTCGGCGACGATTGCGGCGGCGACGACGGTGCCAAAGAAGTTGTTCGAGTGCGAACTGTGCGGCAAATCGTTCGCCACCAAGCAGGGTATGAAGAATCACGTGTACGCCGAACTGAATATGCGTAAATACGTGTGCGAGATATGCGGTAAACGGTATAACTGGTGGATGGGGCTGAAGGAGCATTCCATAATGACGCACGGCATCAAGGAGTTCGCGTGTATGCTGTGCAGCAAAGAGTTCCCCACCAAGAAACGCTACAAAGATCACATGTCCGTGCACTCGGAAGAGCGTCCGTACAACTGCGAATGCGGTAACGTGTTTAAGTTGAAACGCTATCTGAAAAAGCACCAGAAACGTTGCTGTAAGTCGGTGAAAACGGAGTAG
- Protein Sequence
- MAQVSKKILLSEYGEEGEVGMPTQTSLMKYSSATNQIVANFEKESHDPLARKCIVCDADVQDDVKNDLLCATCLQEQPDLLRLQTCDNETLLKHLINLPHEGVYLQCDLCDFQCEPVPEFFNKHYATHIERETTVVEYDQSVASSGGTTTSCSMQCDICKKAFTQKITLIRHLKNHEKKLFSCSLCSGTFKTQLQLKIHRKRHKRISLSNTLMYCELCKKYFKTKKGFAYHQQRICVLFKCFICNESFANQLALAQHSSIKHSTGEQSVEEWMKVEAKQKASVKEEKPPEVMVEPKCAEKDDVAIGERRLEIAKKMKIELVQSVAASVADNSMRSRCKICGKVVTTAVLPRHMILHKEDRPFTCDLCGKCFKRKSSLQDHIMIEMGMKNYVCDVCGMKFLKQGYLNKHVRYHKLSNGEFQGFACEQCGKRFSEKWRLGVHQRAVHKGGRFSSCKCDICGELFAERYMVKMHKHKAHNGEAFSEHQCPVCERKFLEKWMLKSHLRNTHRSGVRKLYCDLCGRSDHVAQECAHRHTLREVPCMLCGETFSSNVSLKEHVTSAHIFTLKRELTAEEMDSAAATGSETLDSAGETATATGRKKMVHHVCAGCGKHFISKLNLRAHETRENCFKSLKYDCSHCGKTFTSKFTLSNHVMLHKKATSGLPYQCEFCSKDFAAEESLQSHLAMEKVCLLCDAVYPCNDQLKNHVFGDHNNDDDADECAISNQPDYSSAAASAATTGEIGDPKPFECKLCGKKFMRKQAMKNHLFAEMNLRRYVCEFCDKSYNYYSHLKEHLVSSHGEKEYLCGYCGKDFPTKKRFRDHVTLHSDEKPFMCECGQSFKLSRSVRAQRDDENAKAKTEPISVAVAATAAGKDRRPVKDELNVCVVCHVKHVGNSEFCDNCSNFKPVEVWLQSPAPLTTLADNYDRFMVVHDNGIAYMKCDKCVFICRPIVDVFSSHYVLHSTDDGEDGTNGHPTLSATATAGDCPAADNGRDGDLDGDILMKCAKCNQLFADDATLSAHYSIHTLQKLACKVCNRTFKTKVKLQIHKRKHSTKVTATATTIKCGRCDKEFKTQSGYKHHRAKVCVEYRCELCGQIFLVKSLLNGHLKKEHDVEVAQKEEVAGGGAASSAGSSAARRPSGVCSVCGKKINESAMTRHMQLHSDEKPYECAMCGKQFRIKWSLREHIMIEIGMKDYVCEVCGKKFVIQAYLNKHMRFHLMCDGKFEGFQCEMCGKKFAEEWRVKEHQRNAHRAAEKGRQYACNLCERKFARKWLVRSHKRAAHDEYLEQYQCEHCAKTFTEKWMIKLHLQTLHHETSSFGRHVDAATGDEKYGDGQEYGAGSGTFASSHVVNKLFEYNKMITGTERRGARRDGGAGDASAAGGSSSSATIAAATTVPKKLFECELCGKSFATKQGMKNHVYAELNMRKYVCEICGKRYNWWMGLKEHSIMTHGIKEFACMLCSKEFPTKKRYKDHMSVHSEERPYNCECGNVFKLKRYLKKHQKRCCKSVKTE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -