Epel019939.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ericerus pela
Gene Symbol
-
Assembly
GCA_011428145.1
Location
WOFM01000461.1:38151-43737[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00077 0.14 13.6 2.6 1 23 105 127 105 127 0.98
2 25 0.00018 0.032 15.6 5.7 1 23 133 155 133 155 0.98
3 25 1.1e-05 0.002 19.4 2.3 3 23 163 183 161 183 0.95
4 25 3.1e-05 0.0055 18.0 5.2 2 23 190 211 189 211 0.98
5 25 1.2e-05 0.0021 19.3 4.9 1 23 217 239 217 239 0.98
6 25 0.00043 0.077 14.4 0.8 3 23 248 268 246 268 0.98
7 25 0.0015 0.26 12.7 0.3 1 23 373 395 373 395 0.97
8 25 2.5e-05 0.0045 18.3 1.1 1 23 401 423 401 423 0.98
9 25 7.7e-05 0.014 16.7 2.8 1 23 429 451 429 451 0.98
10 25 0.043 7.8 8.1 4.5 1 23 457 479 457 479 0.98
11 25 2.3e-05 0.0041 18.4 1.7 1 21 485 505 485 506 0.94
12 25 6.9e-06 0.0012 20.0 1.2 1 23 513 536 513 536 0.96
13 25 0.00038 0.067 14.6 1.3 1 23 771 793 771 793 0.97
14 25 2.3e-05 0.0041 18.4 3.5 1 23 799 822 799 822 0.97
15 25 6e-05 0.011 17.1 0.5 1 23 828 850 828 850 0.95
16 25 3.5e-06 0.00062 21.0 1.2 1 23 856 878 856 878 0.99
17 25 1.3e-07 2.3e-05 25.5 1.5 1 23 884 906 884 906 0.99
18 25 0.13 24 6.6 4.5 1 23 912 934 912 934 0.98
19 25 3e-05 0.0053 18.0 1.0 1 23 939 961 939 961 0.97
20 25 0.00025 0.044 15.2 0.9 1 23 967 989 967 989 0.95
21 25 4.3e-05 0.0076 17.5 1.3 2 23 996 1017 995 1017 0.97
22 25 1.2e-05 0.0021 19.3 0.1 1 23 1023 1045 1023 1045 0.98
23 25 8.5 1.5e+03 0.9 3.0 3 23 1053 1073 1051 1073 0.90
24 25 0.085 15 7.2 1.3 1 23 1079 1102 1079 1102 0.96
25 25 0.0001 0.018 16.3 0.1 1 21 1107 1127 1107 1128 0.95

Sequence Information

Coding Sequence
ATGTGCGATACTTGGGGACTTGCTCAAACGGAATCTCATTTTCTCGAGACGCCCTCCTTGAACGCTGTTGACGTCAAACCTACGAAATCTATTCAAATGGGAGAAAGTTCGTCTGGCGATCGACCTATGTTTATTTTCCAGACGCCCTCATTGAACGCCGTTAACGTTGAACCTACGAAATCTCTTCAATCGGGAGGGAGCTCGTCTGGTGATCGACCCATGTTTATTTTCCAGAAACCTTCATCGAACGCCGTCAACTTCGAACCCTCGAAATCTGCTCAACTGGGAGAGAGTTCGTCGGGCGATCGACCCTTTATGTGTGATCTGTGTGGTGCTACATTCAAATTAAAGAATTGCCTAAGGAGTCATGAACGATCTCATGCCGAAGTTCGACCATTCGTTTGTGATATCTGTCAAGCATCGTTCAAACACAACCATCACTTGTTGAAACACGAGCGCCTGCATACCAATGAAAAACCACATCTTTGCACTTTCTGCGGTAAAAGTTTCAGTCTAAGAGACAGCCTGTCAAGACACATGCTCATTCATAcgggtgaaaagaaaaacaaatgccATTTCTGCGATGCTGCTTTCATTCAGAAATCCCATCTGAAATCTCACCTGCGAAAACATACTGGTGAAAAACCGTATGAGTGCAAATTTTGTGGcgaaaaattttgcaataatgCTTCATTAACAAATCATATCCGACATCACAATGATGATGAAAGGCCATTCGGTTGCGGGCTGTGTACATTacgtttcaaaaataaagtGTCTTTGTACAGCCACATCCGGATGCATATGAGTAATTTGAATCTTAATGTAGAGAATTTGATCGATGAAAAACTTCTGAATTTAGAGGGCGGAAATAATTCGAGCGCCGTATGTAGTGTCGAAGAACTATTATCGTCTGCGGAATCAAGGTTGAATGGAgctttggaaaatattaataacaatATTGTGAGCTCTGAAATTCAGGGTCTAGATGTTCCCCTTGTTGATACCTCCGTTGTTGATACATCTGTGAAGAGCTTTCtcaaaaaacaattacaaaGGAAAGCTGTCGATTTGTTCAAATCGTCGAATGTTAAAAAGGCAGTGAAGGAAAAACCATTTAAATGTGACGTATGTCGTGCAGCATTCAAAGTTTTCGAAAACTTGGTCAAGCATAAAGAAATTCATACGGTCTTCGAGTCGTATGAATGTAAGATTTGTGGTATGAAGTTTAGCTCCAGGCGATCGTTTATTGGTCATAAGCGTGTTCATTCGATTAAGCAGCTGTTCGAGTGTGCTCATTGCTCGATAAAATTACGCGATAAAAGCTCACTACGCCGCCATATGAGTCGTCATATGGGTAAAGCTCCGTTCAAATGTCGATactgtaaaatgaaaatctatCAGAAGAGTCACGTAGAGATACACGAGCGCAAGCACACTGGAGAAAGGCCTTTTAAATGTGACAAATGTGACAAGACTTTCACATCGAAGGGTAATTTGCAGTTTCATTTGCGTAATTACAGCAAAGTGAAACCTTTCGAATGTAATCTCTGCGACCGAAAATTCAAAACCAGATTTGCGCTAAACACTCACTTACGTGCTGATCATTTGCGTTCTCAGACGGAGGACGAAGTGGAGACTTTACTTGACCAGTGTCAGTATTCTGGAAGACAGggaaaacttcagaaaaaaccTGAAGATTTTCAACCAGAAGAATCAAATTCGAAAAAACTTCGTAAAAAACCTCGAGTATTTCATCGAGAATTCGATTCGaaaaaatgtcataaaaaacCTCGAGATTTTCTGCAAGAATCGGATTCGAAGAAACCTAGAAAAGCGCGAGATTTTCATAGTTCGAAACGTGAAACATTGGAGCGTGAATATGGACTCATACCTTCGAAAGCGAGTGATAAAAATGAGtcTGAAACGTTAGGTGAATGTTCAAAAACTGTAACGAGTTCTAATTTGACTGCCTATAGCTCGGCAAATAGTGATAATGAAGATGACCGTTATAATGACTCTGCTCCTTCGCCCGAATATGGCGATGAAAATTCTAATGAAGAAAATTTGGGATTATCCGCAGGAAAGCAGTGGGATTCTGATCagtgtgaaaatttggttgtttCGGTAGAAAGTGATTTTTGGAACACGAAAGTTCAAGATGAAGAAAACCAGGAAGACACCGAAGAGCCACTGGCAAGATCTCCCGACCTGATGACCCCCGTAGTCGCTGAATTGGGAATTTCTTCAAAGGATCTCAAACAGgccaaaaaatcgaaaaaagtCGCCTCCACTGCTGACGAGCGAATTTATATCTGCGACGTCTGTAGCGCTTcgttcaaaagaaaaaattgcctTGTCAGTCACCTGATTTCGCACACCGACGAAAAGCAGCATGTGTGCGAGATGTGCAACGCCAGTTACAAACGTCGCCATAATCTTCTCAAGCATATTCGCGTAACGCATGGCAAAGAACGTCGTTTCCTTTGCAGTGACTGCGGCGCCAAGTTCGGCCACAAAGAATCGTTGGTGCGCCACATAATGTGGCACACCGGTGACAGGCCGTTCAAATGTGATCAGTGCACATCCTCCTTCAGCCAGAAGGGCGCACTGAAGGTGCACTTGCGTACACACACCGACTACAAGCCGTTCCAGTGCGACCTGTGCGGCTCCTCATTCCGCCAGAAGACGCAACTCCAGGTGCACATGCGCACCCACACCGGAGAACGACCGTTCAAGTGTCAGTACTGTGAAAGCGCCTTCAGCTCGCACACCTCGCACCGCGCCCACGTACGCATCCATACCGGCGAACTTTTCACGTGCGATGTGTGTGGTGCCAAATTTCGTACCCAGCGATCATTGAACTATCATCGAAACGGCCACACAGACGTGAGAAGGTACAAGTGCGAGGTGTGCGAACGTGACTTCAAGAGCTCTAAGGGACTAAAATCGCATTCGTTGTTGCACACGGAAGAAAAACGGCTTCAGTGCTCCGTGTGCGGCAGTCGATTCTTGCGCCAAAATGATTTGCGTAAACACATGCGGACGCACTCCACCGAACGGCCGTTCAAGTGCGATGAGTGTGGCGCTGCGTTCAAGGAGAGAGTCGGTTTGAAGACGCACATGCTGTCGCACACAGACGAGCGACCCTTCGGATGCGACCAGTGCACGCTGCGTTTCAAGTGCCGGAAGACGCTGAACGAGCACTTGCCGACGCACGTCCTCACCAGGTCGTTCCAATGTCAATTTTGCGCCGCCACATTCAAAGCGCAGCGGTATATGCGTCAGCACGAACAACGTATTCACAATCGTGTGTTGTTCAAATGTCCTACCTGCGGGGCGTCATTTAAGGCGGAAACTACTTTGAAAAGACACATTGCTAAAGCGAGATGTTGA
Protein Sequence
MCDTWGLAQTESHFLETPSLNAVDVKPTKSIQMGESSSGDRPMFIFQTPSLNAVNVEPTKSLQSGGSSSGDRPMFIFQKPSSNAVNFEPSKSAQLGESSSGDRPFMCDLCGATFKLKNCLRSHERSHAEVRPFVCDICQASFKHNHHLLKHERLHTNEKPHLCTFCGKSFSLRDSLSRHMLIHTGEKKNKCHFCDAAFIQKSHLKSHLRKHTGEKPYECKFCGEKFCNNASLTNHIRHHNDDERPFGCGLCTLRFKNKVSLYSHIRMHMSNLNLNVENLIDEKLLNLEGGNNSSAVCSVEELLSSAESRLNGALENINNNIVSSEIQGLDVPLVDTSVVDTSVKSFLKKQLQRKAVDLFKSSNVKKAVKEKPFKCDVCRAAFKVFENLVKHKEIHTVFESYECKICGMKFSSRRSFIGHKRVHSIKQLFECAHCSIKLRDKSSLRRHMSRHMGKAPFKCRYCKMKIYQKSHVEIHERKHTGERPFKCDKCDKTFTSKGNLQFHLRNYSKVKPFECNLCDRKFKTRFALNTHLRADHLRSQTEDEVETLLDQCQYSGRQGKLQKKPEDFQPEESNSKKLRKKPRVFHREFDSKKCHKKPRDFLQESDSKKPRKARDFHSSKRETLEREYGLIPSKASDKNESETLGECSKTVTSSNLTAYSSANSDNEDDRYNDSAPSPEYGDENSNEENLGLSAGKQWDSDQCENLVVSVESDFWNTKVQDEENQEDTEEPLARSPDLMTPVVAELGISSKDLKQAKKSKKVASTADERIYICDVCSASFKRKNCLVSHLISHTDEKQHVCEMCNASYKRRHNLLKHIRVTHGKERRFLCSDCGAKFGHKESLVRHIMWHTGDRPFKCDQCTSSFSQKGALKVHLRTHTDYKPFQCDLCGSSFRQKTQLQVHMRTHTGERPFKCQYCESAFSSHTSHRAHVRIHTGELFTCDVCGAKFRTQRSLNYHRNGHTDVRRYKCEVCERDFKSSKGLKSHSLLHTEEKRLQCSVCGSRFLRQNDLRKHMRTHSTERPFKCDECGAAFKERVGLKTHMLSHTDERPFGCDQCTLRFKCRKTLNEHLPTHVLTRSFQCQFCAATFKAQRYMRQHEQRIHNRVLFKCPTCGASFKAETTLKRHIAKARC*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-