Epel010749.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- clz9
- Assembly
- GCA_011428145.1
- Location
- WOFM01000236.1:295014-297009[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-07 0.00011 22.8 0.0 4 41 14 51 12 54 0.90
Sequence Information
- Coding Sequence
- ATGTTGAAAGTTAAATACCGCAAAACGTACGAAAAAGGAGATATATTAAAGGCAATTCATGAGTTATCTATGAAGAAAATTGGTTTGAATGAGGCGAGTCGCAAATATCAAATCCCAAAAGCTACTTTAAAGAGACACCAACAAGGAGAAGTCAAACGAGGCGCCACATATGATAAAATCAATGGCAGGCTTCCAGTATTTGCTGCACGTATTGAAATGGAATTGAGTGCCCATTTACGCTGGTTAGATGATCACTTCTTTGGATTAACCATTAACCAGGTATGCAAATTAGCATACGATgtagcagaaaaaaataaaataccacatccgtttaataaagaaaaaaaggaagctGGTAAGAAGTGGTTTTATAAATTTCGTGAAAGACACCCTGAACTGTCCCTAAGAGCACCAGAAGGAACATCAATTGCTCGTTTGAAGGGTTTTAACCGTAAAAATGTCAATGAGTTTTTTGATCTTCTCGAGTCTTTGATAGAGAAGTATAATTTTGATGACACAACTATTTTCAATATGGATGAAAGTGGCTTTTGTAATGTGCCAAAAAAATCACCGAAAGTTATCAGTAGTACTGGCAAGCGGCGTGTTGGAACTGTCACAAGTGGGGAACGAGGTGTTAATACAACATTTGTGTGTTGCACAAATGCTATTGGTTCCTTTGTTCCACCCATGATTATTTATAAAAGGGCTAAAACTCACCCAGCTTTAGGCCAAAACAGACCAATAGGAAGTGTAGTGACTACCTCAGAAACAGGCTACATAAGTAGTGAACTTTTTGTCAAATGGTTGCTGCATTTTATTGATGTTGTTCGACCAACTCTCACTAGAAAGGTGTTGCTTCTACTTGACGGGCACACAACACATTCCCTCAACTTGAAAGCAATCTGTCTTGCGCGCGAAAATGGTATAGTGATGTTGCAGCTTCCAGCACATACAACCCACAGACTGCAACCATTGGATGTTGGAGTTTTTGGACCACTCCAAAAgttttatGATCAAGAGCTTGGGATATGGATCCGAAACCATGCAGACAAAGTGACTGTGTTTGATATcgcagaaatttttaataatgcgTATAAAAAAGTTGCCACAATGGTACATGCCAGCCAAGGATTCGAAGGGGCAGGTATATGGCCAACCAATCgccatatttttaaagaagaggATTTTCTGCCTGGGAAAAATTTGAGCAATACCCCTAATTCAGCACAACCTGATCTTGAATGGTCAGATATTATCAATACTGACAATCTACTTCCTCCGGGTCTGTTTCAAAATACCATGGGTACTTGCAATGATGCAGTGTCTCTTGATCAAACACCTACTACATCGAGTGAAAATTTCTTGGAGgtaccactcaaaaaaatttctccgcTACCAATACCATGTGAAAAAGACACTACACGAATGAGTAAATCCGCAAAATCTAGTGAAGTGTTGACCTCATCACCTTATAAAGcagttcttgaaaaaaaatctaatgaaaaggctgaaaaattgaaaaaagcagAGGAGAGAAAAGCTAACAGAATTCTTAAATTTAACAATGTCAAGGAAAATGAAGCTGTAGCTAATATTACGAGAAAAAAACGgccaaataataatttgaagaaaaagcaGTCTAATAGTTCTAAAGCTAGAGTTCTCCCTGTTGCAGTATGTTAA
- Protein Sequence
- MLKVKYRKTYEKGDILKAIHELSMKKIGLNEASRKYQIPKATLKRHQQGEVKRGATYDKINGRLPVFAARIEMELSAHLRWLDDHFFGLTINQVCKLAYDVAEKNKIPHPFNKEKKEAGKKWFYKFRERHPELSLRAPEGTSIARLKGFNRKNVNEFFDLLESLIEKYNFDDTTIFNMDESGFCNVPKKSPKVISSTGKRRVGTVTSGERGVNTTFVCCTNAIGSFVPPMIIYKRAKTHPALGQNRPIGSVVTTSETGYISSELFVKWLLHFIDVVRPTLTRKVLLLLDGHTTHSLNLKAICLARENGIVMLQLPAHTTHRLQPLDVGVFGPLQKFYDQELGIWIRNHADKVTVFDIAEIFNNAYKKVATMVHASQGFEGAGIWPTNRHIFKEEDFLPGKNLSNTPNSAQPDLEWSDIINTDNLLPPGLFQNTMGTCNDAVSLDQTPTTSSENFLEVPLKKISPLPIPCEKDTTRMSKSAKSSEVLTSSPYKAVLEKKSNEKAEKLKKAEERKANRILKFNNVKENEAVANITRKKRPNNNLKKKQSNSSKARVLPVAVC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00669514; iTF_00669515; iTF_00669516; iTF_00669518;
- 90% Identity
- iTF_00669515;
- 80% Identity
- -