Epel026169.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- -
- Assembly
- GCA_011428145.1
- Location
- WOFM01000607.1:759552-760241[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-08 4.3e-05 24.1 0.0 5 33 22 50 20 59 0.91 2 2 4.2 2.1e+03 -0.6 0.0 25 38 85 99 84 103 0.77
Sequence Information
- Coding Sequence
- ATGGTGCCTACTTATCAACAAGCATTAGGAACATGTAAATATAGAGACTACATGGCCAAAAGCTTAGTGAAAGCTGTTGAGGAAGTCAAAGAAAAGGAGTTAAGTTTACAGCAAGCAGCAGAAAAGTATAATGTTCATTATAATACAATCTTTAACAAGATACACAATAAGCATGCTGGAAATGTTGGAAGACAGCAAATATTCAGCGTCGCTGAAGAAGAATCGTTCATTGCTTACCTTATCACCATGTCCGCGTTTGGCTTTCCGATGTCTACAATTGACTTAAGAGTAACTGTTGGTAATTACATACAAAGAACAGGATGCCGTATTCTTACATTTCAGAATAATAAACCAGGAAAAGACTGGGCACAGTCCTTTTTGAGTCGTCATGTGGAAGTTTTAAGTGAGCAAATAGCAAAAAATATTACTCACGATTGTGTGGCAACTAATGAGGATGTGTTGAAtgcattttttaataacttgGCTGTAAAAACTGGATGGTGTACCAGCAGAGAACATTTGGAACTACGATGA
- Protein Sequence
- MVPTYQQALGTCKYRDYMAKSLVKAVEEVKEKELSLQQAAEKYNVHYNTIFNKIHNKHAGNVGRQQIFSVAEEESFIAYLITMSAFGFPMSTIDLRVTVGNYIQRTGCRILTFQNNKPGKDWAQSFLSRHVEVLSEQIAKNITHDCVATNEDVLNAFFNNLAVKTGWCTSREHLELR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -