Epel031341.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- CG5235
- Assembly
- GCA_011428145.1
- Location
- WOFM01001808.1:235982-256822[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 9.7e-07 29.3 0.0 1 43 370 412 370 414 0.93
Sequence Information
- Coding Sequence
- ATGCAAACGCATGCGAGTTCAGCGCAAACTAAAACTCTGAACTTGTGGTTTTTAACCGTCCCATCCGAAGTTTCAGCTATCAACATCGAGGCTGTTGGATTATTAGCCTCAGTTTTATGGACTCCAGTCAGCCGTTACTTAGCTGGTAGCAAACACTTCGTTGATCCTGGTTCGGATAAGTTTGAGTTTATTTGTTCCAATATTGCGCTCTCACCTCATCATTGTTGGGGGTTAATGGATGACCATTATGATTTCAACTACCAGCAGTCCAGAACGCTTCCTCGTGAGGTAACGATATTTCCAAGGGACGAGCTGGTGACCGAGTGCACCTACAATACTGCAAATCGTTCGCAACCCACGCAGggAGGATATTCTACGAAACAAGAAATGTGTCTGGCATACATTACGTACTATCCGAAGGTACAGCTTGCGTCTTGCCAAAGTATGAATCCCATAAAATTCTTTTTCGTCACTTTcggcataaaaaaattttacgattaCGATATGAACACGATAGAGAGTGTATTTTTGAAACTGACGGATAAAGAGATAAAAAAGCACCTGAAGGAGAATGTGCCGCCGAAATTTCCGGTGCCCGCATCCGGCAAGGAGTTTGATAAGCAGTTAAACGAAGCGCACATTTCCATACTGAAACAAATGCCAGATTACACCATAGACGAGCCAGAGGAGACGAATTTGTTTCAGACGCTCACCATTTCGGAGCCACCCGAATTTCGCAACAAAACCTTCAGTCAACACCTTCAAGATCTGCCGTGGAAGGAGATATTCGAACGTGTCGAGGACACCTTTTACCATGGCAATCACATGACGTTTTGTCGCCTGCAAAATGACTCTCTGGCTGTGAGCATAACGAGTCATACCTGCATCGAAGACGACAACCATAGAGACTCCGACTTGGATGGCTCGAAACAACAGATTCCTCACCTCACAAATCTCAATAACTCGACTGTGAAAAAAGACGATAGCCTGGCTAAACGCATTTACACATGCCTTTCGACCCGAGCCAGTAATTCGTCGCACATAAACGACGCGCAGCATCCTCCATTCCTGAACTTCatGGCAAAAAGTGGTTCATATGCTAAATGGACAGAGGAAGAGCTCCAGATAGCTATTAGCGCTTATAGGAACGGTGATCATGGGTTGAATGAATGTGCCCGAGTTTATGGAATTCCAAAAGCAACACTGAAACATCATgccaaaagtaaaaattcttaTCACAACAAAAATACTAGGAAGAGGCAGTACTTTGATAAGGATTCAGAAAAGGTTTTGGCAGAGCACATACTGGAACTTGAGCGCTGTTTTTTTGGTCTTACAATTAAAGATGTACAGAAGTTAGCATTCGATGTGGCGGAAGAACTCAGGGTTAATCATAGATTTAATAAAGAGACTAAAATGGCCACTGAGAAAGAAGTGGTTCTACTCTTTTATGAAAAGGAATCCTCACCTCAGTTTACCCTAACCTGA
- Protein Sequence
- MQTHASSAQTKTLNLWFLTVPSEVSAINIEAVGLLASVLWTPVSRYLAGSKHFVDPGSDKFEFICSNIALSPHHCWGLMDDHYDFNYQQSRTLPREVTIFPRDELVTECTYNTANRSQPTQGGYSTKQEMCLAYITYYPKVQLASCQSMNPIKFFFVTFGIKKFYDYDMNTIESVFLKLTDKEIKKHLKENVPPKFPVPASGKEFDKQLNEAHISILKQMPDYTIDEPEETNLFQTLTISEPPEFRNKTFSQHLQDLPWKEIFERVEDTFYHGNHMTFCRLQNDSLAVSITSHTCIEDDNHRDSDLDGSKQQIPHLTNLNNSTVKKDDSLAKRIYTCLSTRASNSSHINDAQHPPFLNFMAKSGSYAKWTEEELQIAISAYRNGDHGLNECARVYGIPKATLKHHAKSKNSYHNKNTRKRQYFDKDSEKVLAEHILELERCFFGLTIKDVQKLAFDVAEELRVNHRFNKETKMATEKEVVLLFYEKESSPQFTLT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -