Epel012388.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- clz9
- Assembly
- GCA_011428145.1
- Location
- WOFM01000279.1:3324879-3326481[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-10 1.2e-07 32.2 0.0 2 38 26 62 25 65 0.96
Sequence Information
- Coding Sequence
- atggtGCGTACGTATAAAAAAGTGTTGTCGAATAGCCGaaatggcaaaaatttttcatcttatcaATCATATAACCCAGATAAGCTGGATGAAGCTTGTAATTCTGTTAAGACGAACCGAATGTCAGCGTTAGAAGCCAGTAAACATTATAATATTCCACGATCAACTCTGCGAAGACACTTGAGGAATCCAAATATTCAACCAGCTGGCCATCCTACATTGTTTTCCCTGGTGATAGAAGAGAGTTTCGTGCATCATCTGAACATTTTAGCGGAGAGTGGTTTTCCATTTGATGAGTTAGACCTTCGTCATCTTGCTAAAACTTATTTGGATCAGTCAATGACAGAAACTCACCTTAAAGATAACTACCCAGGGAAAGATTGGGCACAAAAGTTTCTGAAAAGACATGCAGCTAAGATTTCAAAACGATtagcaggAAATATTGCTGCAAAACGAGCGAATGTCAGCCCACAACTTTTGAATCGGTTCTTCGAAAATGCGAAAGAAAAACTCACGTCTATTGACCCACAATGCATCATAAATTTCGATGAAACCTGTTTTAGTGACGACccagggaaaaaaaatataatttgtaaaCGTGGCTGTAAATACCCCAAACGAATTATGAACTCTTCCAAATCAGCAACAAGTGTTATGTATGCTGGTACAGCAAGTGGCTATCTCTTTCCTCCTTACGTGGTATATAAATCAACTCATTTGTGGACTACTTGGTGTGAGGGTGGACCACCTGATACAAGGTACAATCGGTCTATGAGTGGTTGGTTCGATTTGATTTGCTTTGAAGACTGGTTTAAAACTATTATTGTGCCCTATTGTCGTCGAATTTCTGGAGAGAAGCTCTTAGTGGGAGACAACTTATCATCACATTTTTCTTTAAGTGTTCTCCAGAAATGTGAAGAATTGAATATTAGGTTCATGTGCTTACCACCTAATGCCACACACCTTTTACAACCTCTAGACGTGGCTTTTTTTGCACCACTAAAAAAATACTGGCGTCAGGTTCTTGAAGAGTGGAAGAAAGGAAAGGTCAACTCGTTTGTGAAGAAAGAAGACTTCCCCACATTACTTCTTAAactgcataaaaaaataaatgtaaatgaGAAGGGAAAAGAAAATCTGATTGCAGGTTTCAATAAAGCAGGATTATATCCTTTTGATCCTGATCGTCCAAAGGAGAGATTACCACACAGCTACGTGACAAAGAATAATGCTGATGAAATACTGCCATGTGTTTCTAATGCAGTGGTATCAATTCTATCAGATATGCGCTATGGTAAGCAGAATGGTACTCCAACTACACAACGGGGCTGTAAACGGAAAGTTCAGGTATCTCCTGGGAAAAGTATTTCGCCAAAAGATTTCCAAATGGATgagaaagctgaaaaaaaaaaactgtttctgGCTTTGGTGTTGACACAATGA
- Protein Sequence
- MVRTYKKVLSNSRNGKNFSSYQSYNPDKLDEACNSVKTNRMSALEASKHYNIPRSTLRRHLRNPNIQPAGHPTLFSLVIEESFVHHLNILAESGFPFDELDLRHLAKTYLDQSMTETHLKDNYPGKDWAQKFLKRHAAKISKRLAGNIAAKRANVSPQLLNRFFENAKEKLTSIDPQCIINFDETCFSDDPGKKNIICKRGCKYPKRIMNSSKSATSVMYAGTASGYLFPPYVVYKSTHLWTTWCEGGPPDTRYNRSMSGWFDLICFEDWFKTIIVPYCRRISGEKLLVGDNLSSHFSLSVLQKCEELNIRFMCLPPNATHLLQPLDVAFFAPLKKYWRQVLEEWKKGKVNSFVKKEDFPTLLLKLHKKINVNEKGKENLIAGFNKAGLYPFDPDRPKERLPHSYVTKNNADEILPCVSNAVVSILSDMRYGKQNGTPTTQRGCKRKVQVSPGKSISPKDFQMDEKAEKKKLFLALVLTQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00669489;
- 80% Identity
- -