Epel005180.1
Basic Information
- Insect
- Ericerus pela
- Gene Symbol
- bab2
- Assembly
- GCA_011428145.1
- Location
- WOFM01000116.1:1419620-1432685[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.4e-12 2.2e-09 37.8 0.0 1 39 453 492 453 496 0.90 2 4 3.7e-12 1.8e-09 38.0 0.0 2 39 508 545 507 548 0.94 3 4 3e-18 1.5e-15 57.5 0.0 1 45 562 607 562 607 0.97 4 4 2.9e-15 1.4e-12 48.0 0.0 2 43 615 657 614 658 0.94
Sequence Information
- Coding Sequence
- ATGGCCAACATTGGGCAGCAGCATTACTGTTTACGTTGGAATAATTATCAATCGAACATGACCTCGGTTTTTTATCAGTTGCTAAGTGCTGAATCGTTTGTTGATGTCACGTTAACTTGCAACGATAGGTCTCTTAAAGCTCATAAaGTGGTCCTTTCCGCATGCTCTTCGTACTTCCAAAAATTGTTGATGGAAAACCCCTGCAAGCACCCAACGATAATACTGCCACAAGAAGTCGGTTTTAGTGATCTTAAATTCATCATTGATTTTGTATATCGCGGTGAAATTGACGTTTCACAAGCACAGTTACAATCTTTGCTGAAGACAGCCGATCACTTGAAAATCAAAGGCTTGTGCGAAGTGCCTGAAGGGGAAGAAGACACAATGAATGAGAACAGCGATTCGATTACTGATGTCAGCGTTTTAGGCAGCCATATCCTGCAagataaatcacaaaaacagaaatttttctcCAGAATTAAAAGCGGTAAATTCACCCCCCAGATAAAACGTAAACTTCCGCAAGATCTTAACAGTGCTAAAAAGTGTTGTGTGAAAGACGTGAAACCAACTGCTGAGCATCAGAATGTGCAGTTGATTCAGACGACCACCATTAATCCGAATGATATTTTAGATACTAGTGGCCAACCGCAGTATCATACGTTGCAGCCAGCTAGTTGCATTACTGTTGCCACGTCAACCGAGGATGATGAAAAGGACATGAAATCCAATACCGCCCTACCAGTCGTTATATTAGATAATCGACATCCACAGTCCATTGCTGTATCTTCGTCTCTGCACTACCTGTCGACTAATAATCAGGCGCAGCCTTGTCAGCCTGCAGAGAAAATTATTATGACCTGTGCGTCGCCCATTATGAGTTCATCTTGCACCACCTTAACTGCGTTACAGGCTCAACCTCCAATACTCATCGATCAGAGCCCTCACCAACAACATTTAACTCCGACAGCAACTAGTTCAGGCGATGATAAAGTTAGAGAAGCTGAAATTATACCGGAAACGCAACCAGCTGGTCCTACTGCTACACCTGTTCATTGTCATTCTATGGATATACCGACGCATAGTCCTACCCATCGTGATATTGCAGtCGACACGTCTGGTATGCAATCCGACGAAGTaaaggtaaaatttgaaactttgagGACCATGGATCAAACATCTGATAGTCTGGATATGGATAGTCATATGTCAGAGCATagtaTGAATAATGATGATCATTCTATGCAAACTATGATGATTACTCCAGAATTATTGGGTTTAATACCGTCCGGATCATCCGCTCCTCCTTCGGAAGCTGGAAGCGACAATGGTAAAGGTATGTCGAAAAAAGAGTGGACACAAGAAGATATGGATGCTGCTCTCGATGCTCTCCGAAGTCATCACATGAGTTTAACGAAAGCGTCAATCACATATGGAATTCCTTCGACTACATTATGGCAACGAGCGCACAGACTAGGCATCGATACGCCGAAGAAAGAAGGTCCTACGAAGTCGTGGAATGAAGAAATACTGAATGTCGCCTTAGATGCGTTAAGAAATGGTTCTTTGTCTGCCAACAAAGCCAGTAAAGCCTATGGTATTCCCAGTAGTACGCTTTATAAAATCGCTAGAAGAGAAGGAATCCGTTTGGCTGCGCCGTTTAACGCCGCTCCGACAACGTGGACCCAAGATGATCTAGAAAAAGCTCTGGAGGCTATACGCACTGGTCAGACTACAGTGCAAAAAGCGGCTACCGAGTACGGCATACCAACGGGAACGTTGTACGGTCGGtgtaaaagggaaaaaatcGAACTTTCGCGTAGCAATCCAACGCCTTGGTCGCAAGATGCCATGTCCGAAGCGTTAGAAGCAATCAGacTGGGTCACATGAGCATTAATCAGGCTTCAATTCATTACAATCTTCCGTATTCGTCGCTGTACGGACGTTTCAGACGTGGCAAGTACGATACCGATCACCTGGATCACGATGAGGATAGCTCGTCGAATATTGACTTGCCGAACACTTCTCATTCGATTTTGCCGCACACAGAAGTGCAACATGACGGGCAAAGTGCGGGTCAGTCTCAGTCGCAGCAGTCCGCATTACAGCCGCAAATTATGCTGTTGCAATACCAACATTCTCCGGCCACACACATTCAAATGTATCAGCCAGCTGCGCCCAGCTGA
- Protein Sequence
- MANIGQQHYCLRWNNYQSNMTSVFYQLLSAESFVDVTLTCNDRSLKAHKVVLSACSSYFQKLLMENPCKHPTIILPQEVGFSDLKFIIDFVYRGEIDVSQAQLQSLLKTADHLKIKGLCEVPEGEEDTMNENSDSITDVSVLGSHILQDKSQKQKFFSRIKSGKFTPQIKRKLPQDLNSAKKCCVKDVKPTAEHQNVQLIQTTTINPNDILDTSGQPQYHTLQPASCITVATSTEDDEKDMKSNTALPVVILDNRHPQSIAVSSSLHYLSTNNQAQPCQPAEKIIMTCASPIMSSSCTTLTALQAQPPILIDQSPHQQHLTPTATSSGDDKVREAEIIPETQPAGPTATPVHCHSMDIPTHSPTHRDIAVDTSGMQSDEVKVKFETLRTMDQTSDSLDMDSHMSEHSMNNDDHSMQTMMITPELLGLIPSGSSAPPSEAGSDNGKGMSKKEWTQEDMDAALDALRSHHMSLTKASITYGIPSTTLWQRAHRLGIDTPKKEGPTKSWNEEILNVALDALRNGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQDDLEKALEAIRTGQTTVQKAATEYGIPTGTLYGRCKREKIELSRSNPTPWSQDAMSEALEAIRLGHMSINQASIHYNLPYSSLYGRFRRGKYDTDHLDHDEDSSSNIDLPNTSHSILPHTEVQHDGQSAGQSQSQQSALQPQIMLLQYQHSPATHIQMYQPAAPS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00669680;
- 90% Identity
- iTF_00669680;
- 80% Identity
- iTF_00669680;