Basic Information

Gene Symbol
GATA6
Assembly
GCA_029851415.1
Location
CM056741.1:137585470-137600141[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-15 1.5e-11 45.4 6.5 1 35 569 602 569 603 0.97
2 2 1.8e-19 1.3e-15 58.4 7.1 1 35 628 661 628 662 0.98

Sequence Information

Coding Sequence
ATGACAGATAATACATCGCAGCCCGATGCTGCAGATTTAGACTGGTCGAATATCAAGCGAGAAGACAGTCCATCCCACGAAATGGTGCCACTGCCTCAAATGGACGATCAGCGACAGCAGAATCATGCAAACAACCCACCAAGCGTGATAACCAGCCGCCGCCACGTGCGAACCATCACGACCACTGGTCACATCACCGAGACTCTTGTCGACTCGGAGTTGGACTCGCCGATGGCCAGCGAGGTTGATATTTCTCACCAGGAAGTACAAAACCACCAACATGATCCCAGACATGTGAAGCACGATGGGCAGGGGACGCCCGTTCCTTACGTGGCtgagcagcaacagcaacaacaacaatcaAGTCAGTACCACGTTCACACATCACAACAACAGAGCCCCGATGATCAACAACGATTGGTTGAACAGCAGCAGAAACAGCATCATATTATATACGCCACATCGAATGGCCGAGATGCTCGCCTCGATGGGTCTAAAGCGGAAGCATCAATCGCAATGAGTGCCGACGGCTCACCCAGATTTGAGGCGCCAACCTCGGACCCCGTGGAGGCGGATCACATAACGTACGTGACGTACGCGGAGGATGCCGATGGCTCGAGGCGGGACGCTCACGTGATAGCAGTTcaagagcagcagcagcagcagcgacaGAGCGCGATCCAAGTGTCGCATCAGAGGTACAGCCCTCACGAGGCAGTGCACCAGACGGCGCGTTACCAGAGCTCGCCGGGTAACGCTTCCAGCGAGGGCTACGACGGCATCGTGGCGGGCCAGACGGGCGTCGTGGCCGGGGTGCATCTCGCCTCGCCAGTGCAAAACTACTCGCCCCCGCTCGACGCTATCAGACAAGCCCAGCAGCAGCAACACCATCACCACCATCACCAACAACATCATCAACAACATCAGCAAcaccaacagcagcagcagcagcagcagcacctGCTCGCGACGGCGTACGCCGACGCCGCGGGAAACGTTAAATACAGCACGGAGGTGAGCGTGGCCAACGAGAGCCTGAAGGCCTCCAGCACGTACACGACCCTGGAGACGGTGCCTCTGCCCCCGAATCAGGGCGTCTCCTACACGCAGTACATCGCCGCGTCGGAGGCGTACCAGCAAGCGCCCGCCAGTTACAACTACCCCAAGCACCAGGAGATATTCATTTACCCCGCATCTAGTCAAAATTCGAGGACCGGAGAGGTAGAGCACTCGACGAGCGTGTACATAAAGAGCGACCCGACGCTGAGCTCGTCGTCGCTGGGCCGGGCGTCGTTCGAGCAGCCGGGCTCGCCGTCTCAGATCGGCCTGTACCCGGGCCCCACGGTCACGTACCAGTTCGCGACCAAGCCCAGCCCGGCCGAGCACCAGTACTGGACGACGTCGAGCGGCCACTCGCCGCCGCCCCCTCCGCCACCGGGCACAGGTGCCGGGCCTTTTGACTACGCGCAGCACCAGGGCTATGGCGCCGAGGCCGCGGccgccgcagcagcagcagccgccgCCGCGGGGATGATTTTCGCGGGTCCAGTGGGCCCATTCGTCGCCAATGGGCCCGGATCGCCGTGGGCCGCGTTGCCGATGCCCGGCGCCGAGCAGGAGGCCTTCGACGCACAACAAGCGCTGCCAGCGCCACCACCCGGCGTTGGATCCCACCAGCACCAGCTCGGCGTCGAGCCCAAGGAGTGCGTCAACTGCGGCTCCAACACAACGCCCCTCTGGAGGAAGGATGGCACGGGGCTCTATCTCTGCAACGCCTGCGGCATCTACTGCAAGACCAACGGAGTCAGCAGGCCACCCGCGCAGCGCGTCAAGCCCAAGGCCTCCATGCCCCCGGCTGGTGGTAGGCGAAATGGTGCCAGGTGCGCCAACTGCGGGACCACTACTACCACACTCTGGCGCAGAAACAATAACGGAGAACCGGTCTGCAATGCATGTGGACTATACTACAAACTTCATGGCGTAAACAGACCAATGAGTATGAAGAAGGAAGGCATACAAACGAGGAAGAGAAAACCGAAGAATCATTCAAGTGTCAACAACCATCATGGGCTATCGAATGCCATTCACAAACAAGAGATCAAGTCCAGTCTACTCGTGGAATCAAAGGTGCAGCTAAACACGTATACTAATGAAAGCGTGAACCCTGGGTCTGAAGAACATTACGTAGTGACAAGTAATTCGCTCTCTGCCACGCAAATATCTGTTACGTTACCTTCGTACGGTGCCCCTCATACGCCTATAAGCTCACCTTCTGCAGCTATGTTAAATCGTCAAACTACACTTACcttGCCACCAGTAGAGGCAGTCTCTGACCGATGTAGTACGGATCTAGGGACGGTGATAACGTCGACCACAGCTGCACATCCGAGTGACAGCATTTCATAG
Protein Sequence
MTDNTSQPDAADLDWSNIKREDSPSHEMVPLPQMDDQRQQNHANNPPSVITSRRHVRTITTTGHITETLVDSELDSPMASEVDISHQEVQNHQHDPRHVKHDGQGTPVPYVAEQQQQQQQSSQYHVHTSQQQSPDDQQRLVEQQQKQHHIIYATSNGRDARLDGSKAEASIAMSADGSPRFEAPTSDPVEADHITYVTYAEDADGSRRDAHVIAVQEQQQQQRQSAIQVSHQRYSPHEAVHQTARYQSSPGNASSEGYDGIVAGQTGVVAGVHLASPVQNYSPPLDAIRQAQQQQHHHHHHQQHHQQHQQHQQQQQQQQHLLATAYADAAGNVKYSTEVSVANESLKASSTYTTLETVPLPPNQGVSYTQYIAASEAYQQAPASYNYPKHQEIFIYPASSQNSRTGEVEHSTSVYIKSDPTLSSSSLGRASFEQPGSPSQIGLYPGPTVTYQFATKPSPAEHQYWTTSSGHSPPPPPPPGTGAGPFDYAQHQGYGAEAAAAAAAAAAAAGMIFAGPVGPFVANGPGSPWAALPMPGAEQEAFDAQQALPAPPPGVGSHQHQLGVEPKECVNCGSNTTPLWRKDGTGLYLCNACGIYCKTNGVSRPPAQRVKPKASMPPAGGRRNGARCANCGTTTTTLWRRNNNGEPVCNACGLYYKLHGVNRPMSMKKEGIQTRKRKPKNHSSVNNHHGLSNAIHKQEIKSSLLVESKVQLNTYTNESVNPGSEEHYVVTSNSLSATQISVTLPSYGAPHTPISSPSAAMLNRQTTLTLPPVEAVSDRCSTDLGTVITSTTAAHPSDSIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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