Ehay003700.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:57106123-57126046[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.4 3e+02 3.9 0.1 2 20 38 56 37 58 0.92 2 21 0.086 18 7.7 3.7 1 23 66 89 66 89 0.98 3 21 9.5 2e+03 1.3 0.3 2 9 210 217 210 218 0.88 4 21 0.78 1.7e+02 4.7 2.3 1 21 220 240 220 241 0.95 5 21 3.5 7.4e+02 2.6 0.1 5 21 318 334 316 335 0.79 6 21 0.049 10 8.5 4.5 2 23 343 364 342 364 0.97 7 21 7.3 1.6e+03 1.6 1.4 1 23 426 448 426 448 0.95 8 21 0.038 8.1 8.8 0.3 2 21 458 477 457 478 0.95 9 21 0.012 2.6 10.4 3.1 2 23 487 508 486 508 0.97 10 21 0.019 4.1 9.8 0.0 2 21 577 596 577 597 0.96 11 21 7.1e-05 0.015 17.4 0.5 2 21 608 627 607 628 0.95 12 21 0.69 1.5e+02 4.8 0.5 1 23 635 657 635 657 0.96 13 21 3.2 6.9e+02 2.7 0.2 3 11 691 699 689 706 0.85 14 21 0.0068 1.5 11.2 2.3 1 23 716 738 716 738 0.97 15 21 0.59 1.3e+02 5.1 1.5 2 13 765 776 765 778 0.91 16 21 0.0023 0.48 12.7 3.6 2 23 822 844 821 844 0.94 17 21 1.6e-05 0.0034 19.5 0.3 2 21 854 873 853 874 0.95 18 21 0.013 2.7 10.3 4.0 1 23 881 903 881 903 0.97 19 21 0.075 16 7.9 0.4 2 19 1113 1130 1112 1133 0.93 20 21 0.00052 0.11 14.7 0.6 2 21 1172 1191 1171 1192 0.93 21 21 0.19 42 6.6 3.2 1 23 1197 1220 1197 1220 0.95
Sequence Information
- Coding Sequence
- ATGGTGGTTCATTATTGCCCGCAGTGTAATGAACAATTTCTCAATGATGTTGTTAGCGATATTGATCGTGGTAGGAATTGTTGCAAAGTTTGCAAGACTTTGTTGACTCTTAAATGTTTGAGATGCGACGCTCGGTATACAAGTTTGGGAGAAGCGAAAAATCATTTGGAAAGTAAATGTAATCCCATAGAATTCTACAGTTGCTCATACTGCACCTATAACTGCTCAGTGAAGAGTAAAATTTACGAGCATCTTCGCAAAGCTCAtgtgaaaatttatgaattctCGCACAATTCTGAGGGGACATCTAGTTTTGATTACGGCGAAGGTGTGGCATTTGTCAAGAAGCTAAGATTTAGCCACACAGCCAAGAAGATCATTGATGTTACTAAAACTCTTTCTCAACTCTTTTGTGGGAAAGTAATTCTTCGCAAGATTCCCTATGTTCCTAGACCATTGCAAGTCATATCAAATGCCTCCTTGAACAGAGTGCATGATAGTACTGAGAATTCCCATAATGATGAATTCTTCTTCAAGGATCCTGGAAAAAAGCGTGCCATCCAAATGAGTAAGCCATTCTgctcaaaatgtgatagaactATTGAAAACGTCTCAAGAAAGATAAGAAAGTGTCCTGAATGTGGAACTTCCTTGTTTTACAAATGCATGACCTGTAACTCAAAACTAACGCACATTGATTCTTATCGACGTCATCTACAAAAAACTTGTCCTGGTACTGTTGATAGGCAAAAGGTAGTTGGGTTTAAACCAAAAAAGTCTTGTAAAAATATCAATAACAAAGAAAATTCAGCTCGCAAAAAAAATGTAGGATGCAAGAGTAACGTTAAAAAAGCAAAATCAGCAATTTCCAAAACGAATAAATCCACCAAGAACATTGATAAAAAAAGTACTGCcagcaagaaaaaaattgaagGTCCACCTGAACCAAAAGAGTGTCCAAGATGTGGAACGAAAGTGGTTTACCTGCAGAAACATCTCAAATATTGTGGGGAAGCTGCTCGAATACCATGTCCCTTTTGCTCGTATCGAACTCATCATCAAAGAAGCTTGAAACTCCATCTTAAAACTCATTTGAAGTTTCGAAGATTCAATGTTCAAGATGTCTCAATGGAAGTTGCAAAAAGGGTGAAGAAGCGCGGTgctttgattttgatcaaacgtTACTGTCAGAAATGTAATCTAGAGAAAGAAATACGAAAAAAACCAGATATGCACTGTAAAAAAGCATGTTTGAAATGCAATACAGTGATGCTGTATCGGTGTATAAAATGTAAGATGGATTTTGATCGCTATTCAAGAATAGCGTATCACGTCAAGTCACATGATATGACGAACTCAGGACCGCCTGTGAAATGTCAAGAATGTGGTCTCGAATATCTGAACTCCGAAAAATTGAAACGACACCAGAAGTATTGTGGGCCCAATGTGAAGACTCTCCAATGCGAGCGATGCCCCTACACGACCAAATATCCAAAATGTTTGAAATCCCATTACTTAACACATGAGAAGTATGACGAGAAAATGTTGCCAGGAAATGAGGATCCAGAATCAGTATCATGCCAGAACTTAGAATCACCCCAAAATGTCAGCTTTACAGATCTCGCTGCATCAATGGATAGATTCTGCAAAAAATGTGATGTAACGTACCCGGGCAGGTTGTTCCGATATTCTTTGACCTGCTCACGTTGTAAGGGTGAGTTACATCGCCAATGTGGCAAGTGCAAAGAAGTTTTCGACACGTATGCGGCCTTAGCCTACCATTTGAGGGCAACATGTAAATTAGCAGATATAAAGCCGAGTAAATGCTCGATCtgcgataaatttttttcaaatgaagtttctcTGGAGATTCATATGCAGCACTGCGGTCAAGGAACAAAGTACTTCTGCGAGCTCTGTCCTTTTCAGAGTAAGTGGAAGAAGGGGTTGGAGGGCCACATGAAGACTCATGAAAACTTTGATGCTATTACAGAAGGAAAAAGTGAAGGAAATGAACCTAAACGTATAATGGGAGTTAAATACAAGTGTGGAGAAGTGGAGTATGTTGATTGTAAAAAATGCGGCAAGGTCGTGAAAGAATCCACGATTGTCTCGCATGAAAACCACTGTGGGAAAGAAGCGATCTACTTCTGCACTCTATGCTCGTATAAAAGCAAGTTTGAGTCCAACTTGAGGATCCATCTTCAGAGTCACGAAAATCGCAagttgaaagattttgaaaaacttggaGAAGGAGCTCCAGTGACACGTACCCTGGATATGTTTCAGCGTTATTGTCCAACGTGTAAgagatcattcaaaaatcaacccTTCAGAAATGATAAACAATGCAAAATTTGCAATACTCATTTACAAATGGAGTGTCTCAAGTGTAAAATGAGAACAATAAGTTATGGTAGAATTGCACACCATGTACGATACGTTTGTGGTGGTCTATGGTTGAAGTGCAGCGAGTGTGACTTTCAATGCTCAAGTAAATCTAATCTTGAGAATCATTTCATACGTAAGCACACGATAATCGATCCAGAAAACTACAAAACGTGTCCTGATTGCGGAAAGCTGTTCAAGCTGCTTGATAACTTGAAAAAACACATGAAAATTTGCCAACAAGTTGATAGTTACTTCTGTAATGATTGCCCATACAGTACCAAACATAAAAAGTCTATCAGAAATCATGTCTCACGCCATTTGCTTGGCCTTGAAGTAAGACACTGGAAGATTGCTCGTATAGAAAGCAAGACCTCTCTGAAAGAGAAGAATAGGCGCATTGAATCCAGTGATCCTCCTGTCACGGACGTCTGTGTCCCACAGATCATATCCCAATTGTATTATGGCAGGGTCATCTTGGAAAAATTACCCAAGGCTACCTTGGACTCGCTTAATCAGAGGAGGTCAAGAGATATGGGCTTTCTCCATAGAAATTCTGACTATGCAATCAAAGTCGAAAATCCGTGCTCATCATGTGCTGAAATAGTGAAAATTTGGAAAGCTCATAAGCAGAATAACTCTTATCAGCACCGTGTGAAGCAGGAATTCGATTCAAATGGACTGAAACAAGAAGTGGATCATTACGCTGAGAATTATATTTCACGGGACTATCTGACAGGATGGGATTCGAGGGGTATCGGAGAATCAGAAGATGAAGCTGATGATTCTGATAATGACTATGGACTATTTCCCATTAAAGATTTTGATTCAGTATCTGGCTTGGCTGTACTGACTAAAAAATACTGCCCTACTTGTGACGATATAATCGATTGGTACATAAGCTCCTCTGACGAGATTTGTCCAATGTGCGACTCGGCTATTCGTTTACAATGTTCTGATTGTAGTCAAGATTACTCAGACAACTCTACCGTGAAGAGTCATTCGACGAGCTGGTGTGTGTctggaaaaagtatcaaaaaatcTAAACGAGGTAATAGGATTTCGAACAAGCCGGTACTGACTGAGCGCGCTCGACCCAACAACTCAGATCATATCGCGCCGACAGAGTGTCCAAAATGCAACAAAGTATTGAAGAATTTGTCATCTTTTCGACGACATTCTCGTATTTGTAAAGAGCTCTTCAGATGCGATTACTGTTCCTTTGAAAGTTTTCATGGTCCAAGTCTGAAACGACACATAAAACGAAACCACTCGATAGATCAACAGTATTACGAATCAGCTGACAACACACTAGGGATTTTCAAAGGCAAGGAAAGTAAATGCTTTGATTGGTTTTCTCTAAGACTGAGGCTTATTCTTTGCTGA
- Protein Sequence
- MVVHYCPQCNEQFLNDVVSDIDRGRNCCKVCKTLLTLKCLRCDARYTSLGEAKNHLESKCNPIEFYSCSYCTYNCSVKSKIYEHLRKAHVKIYEFSHNSEGTSSFDYGEGVAFVKKLRFSHTAKKIIDVTKTLSQLFCGKVILRKIPYVPRPLQVISNASLNRVHDSTENSHNDEFFFKDPGKKRAIQMSKPFCSKCDRTIENVSRKIRKCPECGTSLFYKCMTCNSKLTHIDSYRRHLQKTCPGTVDRQKVVGFKPKKSCKNINNKENSARKKNVGCKSNVKKAKSAISKTNKSTKNIDKKSTASKKKIEGPPEPKECPRCGTKVVYLQKHLKYCGEAARIPCPFCSYRTHHQRSLKLHLKTHLKFRRFNVQDVSMEVAKRVKKRGALILIKRYCQKCNLEKEIRKKPDMHCKKACLKCNTVMLYRCIKCKMDFDRYSRIAYHVKSHDMTNSGPPVKCQECGLEYLNSEKLKRHQKYCGPNVKTLQCERCPYTTKYPKCLKSHYLTHEKYDEKMLPGNEDPESVSCQNLESPQNVSFTDLAASMDRFCKKCDVTYPGRLFRYSLTCSRCKGELHRQCGKCKEVFDTYAALAYHLRATCKLADIKPSKCSICDKFFSNEVSLEIHMQHCGQGTKYFCELCPFQSKWKKGLEGHMKTHENFDAITEGKSEGNEPKRIMGVKYKCGEVEYVDCKKCGKVVKESTIVSHENHCGKEAIYFCTLCSYKSKFESNLRIHLQSHENRKLKDFEKLGEGAPVTRTLDMFQRYCPTCKRSFKNQPFRNDKQCKICNTHLQMECLKCKMRTISYGRIAHHVRYVCGGLWLKCSECDFQCSSKSNLENHFIRKHTIIDPENYKTCPDCGKLFKLLDNLKKHMKICQQVDSYFCNDCPYSTKHKKSIRNHVSRHLLGLEVRHWKIARIESKTSLKEKNRRIESSDPPVTDVCVPQIISQLYYGRVILEKLPKATLDSLNQRRSRDMGFLHRNSDYAIKVENPCSSCAEIVKIWKAHKQNNSYQHRVKQEFDSNGLKQEVDHYAENYISRDYLTGWDSRGIGESEDEADDSDNDYGLFPIKDFDSVSGLAVLTKKYCPTCDDIIDWYISSSDEICPMCDSAIRLQCSDCSQDYSDNSTVKSHSTSWCVSGKSIKKSKRGNRISNKPVLTERARPNNSDHIAPTECPKCNKVLKNLSSFRRHSRICKELFRCDYCSFESFHGPSLKRHIKRNHSIDQQYYESADNTLGIFKGKESKCFDWFSLRLRLILC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -