Ehay016896.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:10574757-10577186[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.79 1.7e+02 4.7 5.0 1 19 74 92 74 97 0.94 2 15 0.26 57 6.2 1.0 1 23 140 163 140 163 0.92 3 15 2.5 5.3e+02 3.1 4.0 3 23 228 249 227 249 0.93 4 15 0.25 53 6.2 1.2 1 23 342 365 342 365 0.93 5 15 6.5 1.4e+03 1.8 3.0 1 23 386 409 386 409 0.91 6 15 2.9 6.2e+02 2.9 11.3 1 23 424 446 424 446 0.98 7 15 0.0052 1.1 11.5 2.8 1 23 456 479 456 479 0.95 8 15 0.88 1.9e+02 4.5 3.2 2 23 524 546 523 546 0.93 9 15 0.079 17 7.8 1.3 1 23 577 600 577 600 0.96 10 15 6.2e-06 0.0013 20.7 0.9 1 23 606 629 606 629 0.98 11 15 0.0011 0.23 13.7 4.6 2 23 636 658 635 658 0.95 12 15 0.0015 0.33 13.2 0.3 1 23 663 686 663 686 0.96 13 15 5e-05 0.011 17.9 0.3 1 20 692 711 692 714 0.93 14 15 0.00084 0.18 14.0 0.4 2 23 721 742 720 742 0.97 15 15 7.2e-05 0.015 17.4 3.0 1 23 748 770 748 770 0.98
Sequence Information
- Coding Sequence
- ATGACTAGAGCACTACGCAGATCCCTTGCTATCCGCAACGACCTCATCCTCAtggaacaacaacaacaacaacaacaacaacaagatGGTAATACAGATGGCGACACTATAGCTGTGGTGAAAATTGAACCAGAAGTTTTAGCAGAGTTGGAAATCATCAATTTGCTTGGCCGTGAACTTGGAAATTTAGCCAAACCAGTTACCGAATTGACCAAGATATTCTCATGTAAAGAATGCAATGCTCACTTTCCTTCGGAGCATTTGTTGGATAAACACTGTGACAATAATCATCCTGCATCTCCTGCATCCAACGATGTACCAGACACATCAGAAGAGCCACTGCCACCACCATCACCTTGTGCCGAAGATGAGAGAATAAAGTTCAGAGGATATCACAAGAATGTGAGAACGGGATactttttttgtaacttttgtaCTTACAGCTCGAGCTCTCAAGCAGCTGTAAGAGTTCATTCGACTCGTCTGCATTGGGATCTTATTGAAGATGATGGTACAACAGAAGATTTAAGCGAATCAGATAAAAAGAAGTCCCGGAAACGAAAACTTGATACAGGAGATAAAAGCAGCTCTAATGGTGCATTTGACTCTGTATCTTTTGAGGATAAggtcaaaattttgcaaatattctttcaaaatccAAGCGATGAGTTTGCGCGTAACTGTCCATGCTGCTTCTACAGGACGGAAAAACGATCAAATTTCAAAGAACATGTGAGACGTATGCACAAAGATATGTGGCAAGCTTGTCATCCTCCCAAACCTCCCAAATCACCGCGAAAATCTAAATCAGATGATGCCAAAGAAGGAGAAACCCCCACAGAACAAACTGAGAAAAATGGTGTCGAAGACGAAGATGAGGATAACGGTTGGTGGAGTAAATTGGGAGAACAACCGAAACAGAAAAAACCGGTCAGCGTTGCCCAGCCAGAAACCAAAGCAAAAAGACGAAGAGTGAATAAAAATGCAGATGGCAGCACTGAGCCAAGAGCTTCAAAGAAGAAGCACAAGTGTATCACCTGTGAATCCGAATTCAACTCTGTGAAGGCTCTCAATAAACACATAAGTACTGATCATCCAGAAGTCCGACTTGAAAATCTTCGTAAAAAACGTTTGGTTCGTTGGGCTTCTACAGGTTATGCTTGCCATCACTGCAGCTTTGTTGGAAGTACTGTCGAGAGTACTGGCAGgcattcaagaaaaaatcacaGTTTACCAATGGCTTTTGTTCAAGCAATTCCAGCTACTTCCTTCAACTGCCATCATTGCTATTTTACGTGCGACAAACGCAAAGACATGCAGACTCATACCAAAACTCACAGAGTCGAGCTAAACGAAACTGGTGTTTATGATTGCTCATTGTGCAATTTTAGTTCTACAAGTCGTGAATGTCTGCAGAGGCATATTACAGTGAAACATGAGCGACCAGCAGTTTACAAAAGTGAACCTCAAGAATGCAAAAGTTGCGATTACACGTGCTTGAATTCGCAGGTTATGGAATGGCATAAGAAACAACACGATCCTACACAGGAAGATTTCCCTGAACAATTATCTTGTAATGAATGTAAATTTCTAACTTGGAACAAGTTCCATCTCGCATCTCACATGAGAAAAAGACATAAGGATTTGTTTGGCAAAGCAGACGACATAGATGGCAACGATAAAGAAGATTTGTTCAGTAAGATTACCAATGAAAATGGCGAAATGGTATACTCGTGTCATGTCTGTGAATATTTTTCACCAAACAAATGGGTTCTCAGGATTCATACGATTAGAAAACACACCCACGGACgtaatttcgaatgcgaacagtGTGGCAAAAgatataacctcaaaagtgaTTTGTCCAATCACGTGAGGACCACACACGATGTTCAGaaatctgtcatgtgtgatgtTTGTGGTAAAGTATGTAGAAACAGTCATGGACTTCATGTTCATCAGAAGAACAAACACTTTAGACCAAAGTTTCCTTGTCCTCATTGCCCTAAACGTATGGTTACTCAAGCAAATCTTGATGACCACGTTTTGAGACAACATGAGCAGAAACAGGACTACATTTGCGAAGAATGCGGCAAGATATTTAAGGATGCTCACAGATTGAGATTGCACATGCCAGTACACACTGGTGCTAGACCATGGAAATGTACAATTTGCACAAGTGCCTTTGGTAGAAGAAACGGACTAAGACAGCATCTTCTTACACATTCTAAAGAAAAACCTTACACTTGCGATGTATGTGGTAAATCATTTACTCAGAAGACAGGACTTATCTGTCACAGGAAGAGTCATAAAGGGCCTTTGCCTCCGTTACCACCCTGTCCTAGGGCAGTCATCGATCGTGTGATTCGCGATCTTCTTGGAGAGAACGAGTCATCCGAGATTAATGAGCCTGATGATCAGGCTGACTGA
- Protein Sequence
- MTRALRRSLAIRNDLILMEQQQQQQQQQDGNTDGDTIAVVKIEPEVLAELEIINLLGRELGNLAKPVTELTKIFSCKECNAHFPSEHLLDKHCDNNHPASPASNDVPDTSEEPLPPPSPCAEDERIKFRGYHKNVRTGYFFCNFCTYSSSSQAAVRVHSTRLHWDLIEDDGTTEDLSESDKKKSRKRKLDTGDKSSSNGAFDSVSFEDKVKILQIFFQNPSDEFARNCPCCFYRTEKRSNFKEHVRRMHKDMWQACHPPKPPKSPRKSKSDDAKEGETPTEQTEKNGVEDEDEDNGWWSKLGEQPKQKKPVSVAQPETKAKRRRVNKNADGSTEPRASKKKHKCITCESEFNSVKALNKHISTDHPEVRLENLRKKRLVRWASTGYACHHCSFVGSTVESTGRHSRKNHSLPMAFVQAIPATSFNCHHCYFTCDKRKDMQTHTKTHRVELNETGVYDCSLCNFSSTSRECLQRHITVKHERPAVYKSEPQECKSCDYTCLNSQVMEWHKKQHDPTQEDFPEQLSCNECKFLTWNKFHLASHMRKRHKDLFGKADDIDGNDKEDLFSKITNENGEMVYSCHVCEYFSPNKWVLRIHTIRKHTHGRNFECEQCGKRYNLKSDLSNHVRTTHDVQKSVMCDVCGKVCRNSHGLHVHQKNKHFRPKFPCPHCPKRMVTQANLDDHVLRQHEQKQDYICEECGKIFKDAHRLRLHMPVHTGARPWKCTICTSAFGRRNGLRQHLLTHSKEKPYTCDVCGKSFTQKTGLICHRKSHKGPLPPLPPCPRAVIDRVIRDLLGENESSEINEPDDQAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -