Ehay018276.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:30574023-30577550[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0044 0.94 11.8 0.2 1 20 123 142 123 143 0.96 2 12 0.012 2.6 10.4 4.6 2 23 267 289 267 289 0.91 3 12 3.8e-05 0.0081 18.3 0.6 2 23 345 367 344 367 0.94 4 12 0.13 28 7.1 5.3 3 23 453 474 452 474 0.95 5 12 0.00095 0.2 13.8 0.4 1 23 520 543 520 543 0.96 6 12 0.00051 0.11 14.7 0.1 3 23 592 613 591 613 0.95 7 12 0.00018 0.04 16.1 0.4 3 23 653 674 652 674 0.95 8 12 0.0085 1.8 10.9 3.0 2 23 715 737 714 737 0.96 9 12 0.026 5.6 9.3 2.8 2 23 751 773 750 773 0.94 10 12 0.015 3.3 10.1 0.7 2 20 818 836 818 839 0.93 11 12 0.00041 0.089 15.0 0.0 2 23 960 982 959 982 0.96 12 12 0.0036 0.77 12.0 1.7 1 23 1053 1076 1053 1076 0.98
Sequence Information
- Coding Sequence
- ATGTCGTCAGGCCAGGAAATGTGCCTACAGGAGTCGACCGAAATCGATAGCGAAAGCTCGAGCAGTGAAGAACGAGAATCCCGCAGGCGTCATCTTGGTGATGCGGACAGTCTGCCAAAGAAACGACGAAAACAGTCCACCCCTGTGAAATTTCCTACCACATTGGGCGCAGACGATTGCGAAGATTCCGAAGAGGAGTTACCCGGTGATAACTCTTATCATCACCATGACGCTAACAACAGTCTTGACGACGAAAACGAACATCACACTCTGGAAGGTAAGCTGACGTCATCACCAACGCTGTCAAAATCTGCACAGAGCCTACATCGACTTTCGACAATCAAAGACGAAAATCTCAACAATGAGTTTCGTTGCCAATACTGCagtcaatttttcgataacCGTGTTGCATTGGAGATACACCTTGAGTGTGAACACAGTTCGGAATCACCCCAAATTTTGAATTCGCTACAAGGTCAGTTAAGCCCCGAATCTGGCACGCAACAAGTCAATCTGGAGAATTCTCTAAGTCCGATAAACCTGTCAGGTATCAGTCTAAGAAATTTTGCAGCGAGCACATCGTGGCTTGCAGGACAAGCACAATTGCAGACGCAGGCTGATGTTCCATTAGCTAAAATGGTAGCTGCCAGGAAcaacaatcattttcaaaccatGCCAGCATCATTTCCAGGCCCATTGGCGCAATTCTTACCAATACCAGGTTTTCCAATACCAGATGCATCTCAAATACAAAGAGCGGCAATGGGTCagtttcccaaaatttttaatCCAGACGCATACTGCGAATTGTGCAACAAGGAATTCTGCAATAAGTATTTTCTGAAGACGCATAAGGCAAATAAGCATGGAATTTACTCGGATAATCCAGTAAGTCAATCACAACCTGGAGACGTCACTTTACCAGGTCAATTTGTAACGACAACCAGTGGTCAAGTTGGTAATTTTGGATTAAAAACTTCAGGAGAACAAATATTGCGATTAGAAAACAATGGACTACAACAACCAACAGTACCATGTGACTTGTGCCCCAAACGGTTTAAGAATGAAGACTCACTACGTAAGCACAGATATAAGATTCACATGGGTCATAATAATGAAAGTGTTGACCCCTCTCAGATACAAGTGGCTCTTCCATCATCATCGGGTGAAGATGAAAGACAGAGTCCAGTTGGTTTGGAGATACTTTGCAAGCAAGAAATAAGCATCGACCAGGATGATAGCAATCTTATAGCATCTAGATTAGCTACTATGTCACCCCAGAATGTTCAAAATAGAGACTTTGGCGTTAACGGTAATCGCTGGCAACGTCTTGGCGTCATGAATCCTGAAGCTTTTTGTGAACTTTGCAGCAAGGAGTATTGCAACAAATATTTCCTCCGAACTCACAAGCTCAAGAAACACGGTATCGCAATGCCAGAGAGTGACAAAGCACAAAATAATTCTTTGCCATGGCATCAAGTTCAGACTAGTCCATTGGACCTTATTGTTAGTGATAGGTTTGGAAATGGATCAGAATCTGGTGATCGAGTTGAAGATTTTCAATGCAAGTCATGTGGTATTAGTTTTCAGACACAGGGTTTGTATCAACTTCACGTGGAAAAGATTCATGAAAACATGGAACAGTTGTCTCCAAAACAAGATCAAGAGATTGACTCAACCGATCGAAGGACCGAAGCAATCTCTGAAGATCTTCAGAAGTTACAAACCATGATTCTCCAGCTGAATGGATTAGATTCTAATAAGGCAGCATCTTGTGCACTCTGTGGCAAGGACTACGACAATCCAAATGCTTTGAGGAACCACATGATCTCTGAACACAGTATTATACCAGAGAACTTGTCACCTTCTCAACAACAACAACTCCAGCAACAGCATCATCAACAGCACATGACGTGCGAGAAAAAGTCACCGTCGCCAAGTAATACATCTGCAAACTGTACTGTATGTGAAAAAGATTATCCTAATCAAGAAACATTAAGAAAACACATGCAGGAAGATCATCAACCATCGACTCCAACAAGTTCAACTCAGTTATCATCTTCTGTACCTACAACACCAAAATCAACATCATCCCAATTATCAGAACGCAAAACTACAGCTAACATTACTCCAACTTCGAGTTACTGTGAAATATGTAACAAAGAATTGTGTAACAAATATTTTATGAAGATTCACATGCAAAAAATGCACGgtatagaaattgaaaatggagCTCAAATAAGTGGAGTTGTATGTAATATTTGTAAGAAAGAGCTTTGCAGTAAGTACTTCTTACGAGTTCACAAACAAAACACACATGGTATTGTTGAAGAAGGTACAACACCTGCTAAACAAGATAACTTTGAAACTCCAGTCGTTGGTGAAGACTCAGCTTTAAAAGCAGAAAATCTTGGAGACTTGAACATTCGGTACGTTACACATTTCACAGAAGTATGTCCATTCTGCCATCGACGTTTCCGAAGTGTTAGATGGTTAATGTCACACTTACCTGAACATAAAAAAGCTGGATTGGAAAAACTAAGAGAGATGGAGCAATATCAACAGTCACTCCAAAAATCACGAGGGTCTAACTCAAAAAGTAtccaacagcagcagcaacaacaacaacagaaCCATGTGAACGCTGCCTTAAGAATACCAAATGGTTTTGAACCAAATCAGCACATAAGGAGTGACTTAGCAACACACCAGgttctatcaaatttttttggaaatgcagTAAACGATCAACAAGGTCAATTATTTCATTGTTCACATGAAAACTGCAACTTTTCAACGCCCATTAGACCATACCTCTTCTTGCATGAAAGGTCTCACATACAGGAAACTTCACTCCTAGAAAATGAACGTTTACTTCAATGTCCAATCTGTGCTCAGTCATTCAACCAACCAGAGATGCTTCTTCAACACGTTGCAACTCGACATTCTAATCCACTGCCAGGATTACTTTCACAATTTCCTTTTCCCTTGCTTAACGAGTTTGCCTTAGCAAATGAACATCAAATTCAACAGTTGGAAAAGAATGAGTATTCTGAATCCAAGGAAGATTTACGTCGAACCAGTCCTCAGATTACTAATGACATTGATCTTAGCAAAAAAGAGAATAATTCAGTTCAAGTCGTACCTCCAGGATCATTCAAATGTTCCCAGTGTGGTTTTGTCTCAGCAAACTTAACACGCATGAAAAAACATATGAAAAAAGATCACAAATGTCTAGGTGATCCTGCTGAGACTGCCTTAGCTGAACTTAGTAAAACCTTGAAAGATGTTGCTAATAAACATAAGGTACCAGCTAGTTATGCAATGCCTCAAGAAGCTAATTATTCACTAGATAAGACAGTCATGCAAGCATTTATAATTGAAGAACTTGATAACTCACAAAATGGAAGTAATGGAGATTCACTGAGCCCAACGTCAGGAAGATTTGCTCCAGCTCTGGTCTACTTACCGGTCAAAACGAGAGTCAACGGCGCACTCACCACATCATTTACGCTCAATCCTGCCTGA
- Protein Sequence
- MSSGQEMCLQESTEIDSESSSSEERESRRRHLGDADSLPKKRRKQSTPVKFPTTLGADDCEDSEEELPGDNSYHHHDANNSLDDENEHHTLEGKLTSSPTLSKSAQSLHRLSTIKDENLNNEFRCQYCSQFFDNRVALEIHLECEHSSESPQILNSLQGQLSPESGTQQVNLENSLSPINLSGISLRNFAASTSWLAGQAQLQTQADVPLAKMVAARNNNHFQTMPASFPGPLAQFLPIPGFPIPDASQIQRAAMGQFPKIFNPDAYCELCNKEFCNKYFLKTHKANKHGIYSDNPVSQSQPGDVTLPGQFVTTTSGQVGNFGLKTSGEQILRLENNGLQQPTVPCDLCPKRFKNEDSLRKHRYKIHMGHNNESVDPSQIQVALPSSSGEDERQSPVGLEILCKQEISIDQDDSNLIASRLATMSPQNVQNRDFGVNGNRWQRLGVMNPEAFCELCSKEYCNKYFLRTHKLKKHGIAMPESDKAQNNSLPWHQVQTSPLDLIVSDRFGNGSESGDRVEDFQCKSCGISFQTQGLYQLHVEKIHENMEQLSPKQDQEIDSTDRRTEAISEDLQKLQTMILQLNGLDSNKAASCALCGKDYDNPNALRNHMISEHSIIPENLSPSQQQQLQQQHHQQHMTCEKKSPSPSNTSANCTVCEKDYPNQETLRKHMQEDHQPSTPTSSTQLSSSVPTTPKSTSSQLSERKTTANITPTSSYCEICNKELCNKYFMKIHMQKMHGIEIENGAQISGVVCNICKKELCSKYFLRVHKQNTHGIVEEGTTPAKQDNFETPVVGEDSALKAENLGDLNIRYVTHFTEVCPFCHRRFRSVRWLMSHLPEHKKAGLEKLREMEQYQQSLQKSRGSNSKSIQQQQQQQQQNHVNAALRIPNGFEPNQHIRSDLATHQVLSNFFGNAVNDQQGQLFHCSHENCNFSTPIRPYLFLHERSHIQETSLLENERLLQCPICAQSFNQPEMLLQHVATRHSNPLPGLLSQFPFPLLNEFALANEHQIQQLEKNEYSESKEDLRRTSPQITNDIDLSKKENNSVQVVPPGSFKCSQCGFVSANLTRMKKHMKKDHKCLGDPAETALAELSKTLKDVANKHKVPASYAMPQEANYSLDKTVMQAFIIEELDNSQNGSNGDSLSPTSGRFAPALVYLPVKTRVNGALTTSFTLNPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -