Ehay016895.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:10570347-10573172[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0091 1.9 10.8 1.1 1 19 67 85 67 85 0.98 2 18 0.018 3.8 9.8 0.4 1 23 123 146 123 146 0.96 3 18 0.00039 0.083 15.1 0.9 1 23 191 214 191 214 0.97 4 18 0.12 25 7.3 2.8 1 23 267 290 267 290 0.93 5 18 0.37 78 5.7 0.7 3 23 346 367 344 367 0.93 6 18 0.00014 0.03 16.5 2.9 1 23 444 467 444 467 0.98 7 18 0.0095 2 10.7 0.7 1 23 488 511 488 511 0.95 8 18 0.046 9.8 8.6 0.1 1 23 533 556 533 556 0.96 9 18 0.91 2e+02 4.5 1.1 1 23 571 593 571 593 0.95 10 18 3.7 7.8e+02 2.6 0.1 1 8 603 610 603 626 0.80 11 18 3 6.5e+02 2.8 1.6 3 23 640 660 638 660 0.93 12 18 0.06 13 8.2 2.6 2 23 672 694 671 694 0.95 13 18 6.7e-05 0.014 17.5 6.5 1 23 750 773 750 773 0.96 14 18 7.6e-05 0.016 17.3 0.2 1 23 779 802 779 802 0.97 15 18 0.00055 0.12 14.6 0.3 1 23 807 830 807 830 0.96 16 18 1.2e-06 0.00026 22.9 0.3 1 23 836 858 836 858 0.98 17 18 1.3e-05 0.0028 19.7 0.3 1 23 864 886 864 886 0.98 18 18 0.00045 0.097 14.9 1.3 1 23 892 914 892 914 0.97
Sequence Information
- Coding Sequence
- ATGAAGCGCAAAATCCAGGACAACGAAGATCGAGATAAGCAACGACCACCGAAGAAACGAATTAGCACAGATTCCACGCCGGTTCCTATGGTTCGGATTAAACTTGAAGAAGAGTTGATGCCGTTGTTGGTACTTAATCGAAAGAATGATGAGGATAGCAATAAATCAACAGAATCTAGATCACTACCACAAAACGTTTTTTCGTGTGAAAACTGCAAAGCTATCTTTCCACAGAAGCATTTGTTGAGGAAACATGACTGTGAAACTTATCTTCTCAAATCTACGTCATCTGAAAAGTCAGAATCTTACGACAAAAGTGACAGAATTCAATACAAGGGtcatcaaaaaattataagTACGGGAAAATTCATCTGCGATTACTGTCCAATGATTATGTCTAATCAGTCTTCTATACGACAACATATATCCCGAAAACATAGTGACAACAATAAAAAGAAGAAAGTATCAAAGCCAATAGAAACTTcggatgaagaagaagaagaagagacaATGTCTGACGATGACAAAATCAAGTATAGAGGACATCACAAAATTATTAGTACAGACGAATATGTCTGTGATTATTGCCCTTTAGTCTTGTCTCATCAGGCATCGATGAGGAAACATATATCTCGCAAACATGGTGACTTGCATGCTGagaccatgaaaaatgatacaGCATCCAAGCTATCCGACAGCATATCCGAAAGTGACTCTTCTGATACGGAAGATAATCCAAAGATCGAAAGTGAACGAGTTGATTTTAAGGGATTTTATAAAATAGTCAAGACAGGCGAGTTTCACTGCAATTATTGTCCTTTCAAAATATCCAATAAGTCATCAATACGCTCACACGTAGTTCGCAAACATAAAGAACTCTTAGAAAGTGGATTCGCATCCAAAGAGGCAGACGAGTCGGTTAAAAGAAATGATTCCGATTGTGTCAGTTTTGATCCAGAAGATGATTCAAGGATCGAAGGTGACCGAATTGATTTTAAGGGATTTCACCAAATGACCAAAACAGGCGAGTTTGGATGCAATTTTTGTCCTTTCACTATCTCTAATAAGTCATCAATACGCTCACATGTAGTTCGTAAACATAAAGAACTTCTAGAAAGAGAATTAGCATCCAAAAAAGCTGACGAGTCGGTTCAAAATGATGACTCGAATGACCAGTTAAAACAAGAGTGTTCTTCtgatgaaaaatcagaagatGCATTACCACACGAAGTATTGAAAGTGGTTCTAAAAGAAGGAAAATCAAAAGTCAAACTCAGCCCAGTAGATATCGTTCGTAGATGTTTCAGAAAGTCGAGTTCTCAATCTGTGTATCGTTGTCCAACATGTCCATACAAATCGAGAAAACGCTCAAATTTTAGAGATCACTTGAGACGTCAACATCCCACGATCTGGTCGAACTTTAGAAAACCAAAAATTGTTGATCACCCACTGCAGTTGAAACACAAATGCCTCTATTGTCCTATTGAATACTTTTCGAGAGCTTCTTTAAGGTCGCACGTTGCTCGCGTCCATCGTAAAGGAGAAAATCGAGAAGATGCTGTTGTCAGTCCTGGTCTAACACAAGCTTTGACAGGTTACGCTTGCTATCTTTGTGACTTTATTGGATCTAGTTTACCTAGTCTTAAAAGGCACGTTAACAGAGTACACGAAGATACAGATATGTATCACGGACAGATTCCAGCTACATCTTTTGATTGTGATGCCTGTAATTTCCAATGTGAAAACCGTAAGGAAATGAAAGATCACATTGAAGGTCACAAACCTAAACCAAGTATCGACGGTCGGTACAAATGTACAGACTGCGATTTTGACGCGAATTTACCAGGAATTGTACAATTGCATATGTCTGTCACTCATTTACCACCCAAAATCACCAAAATACCTGACCATGTAAATTGTGATCGTTGTGATTTCACTTGTATCAATAAGCGAGTCATGGAGTGGCACAAAGAACAACATGATTTACCACCTGAAAGAGCAAGACAGATTCTTACTTGTCATGAATGTGGTTTCTTTTCATGGAACAAGACTCTTCTTAGACGACACATACTTAAGAAGCATGAAGAACCTACAGAAGGATGTGAAGTTTACATGGGTTTGAAATCAGAGAGAAGACGTAAGGAACCAGTTCATGTACCGATACCTTGCAGTCACTGCTCTTACATAGCCAAGAACAAAACTACACTGGACTTCCATGTTATTAGAAAACATACTGGATCACTGGAACATGAATGCGAACActgtggaaaaaaattcaaactgaaTCATGATCTCACTCGACATGTCAAAGTCAAACATTTGGATACTAAAATTTATATCTGCGATGTCTGCGGACAGGTTTATAATACTAGCAATGGTCTCTATACTCATCAGAGGTATGCTCATTTTAAACGTGAGTTTGCTTGTCATCTTTGCCCTAAACGTTTGGCAAATCAGGCTAATCTAGATGAGCATATTTTGAAACAGCATGAGCAACGACAAGACTTTATTTGCGAAGAGTGTGGCAAGATTTTTAAGGAATCTCGTACATTGAAAGCACATTTGAGAATACATACTGGCTATAAACCATACGTGTGCAAAGTCTGCAATAAATCTTTTGGCAAAGGTAGTGGACTCAGACAGCACATGCTGATACACTCAGATCAGCGTCTATACATATGCGATATTTGTGGAAAGTCTTATGCACAAAAGACGGGATTGATTTGTCACAGAAAGAGTCATCCTGGACCACTACCTCCGCTACCAGCTTTGCCAAGGGTAGCCGTCGATCGAGTTCTCAGTCGTTTACTACATGGAAGAGAGTAG
- Protein Sequence
- MKRKIQDNEDRDKQRPPKKRISTDSTPVPMVRIKLEEELMPLLVLNRKNDEDSNKSTESRSLPQNVFSCENCKAIFPQKHLLRKHDCETYLLKSTSSEKSESYDKSDRIQYKGHQKIISTGKFICDYCPMIMSNQSSIRQHISRKHSDNNKKKKVSKPIETSDEEEEEETMSDDDKIKYRGHHKIISTDEYVCDYCPLVLSHQASMRKHISRKHGDLHAETMKNDTASKLSDSISESDSSDTEDNPKIESERVDFKGFYKIVKTGEFHCNYCPFKISNKSSIRSHVVRKHKELLESGFASKEADESVKRNDSDCVSFDPEDDSRIEGDRIDFKGFHQMTKTGEFGCNFCPFTISNKSSIRSHVVRKHKELLERELASKKADESVQNDDSNDQLKQECSSDEKSEDALPHEVLKVVLKEGKSKVKLSPVDIVRRCFRKSSSQSVYRCPTCPYKSRKRSNFRDHLRRQHPTIWSNFRKPKIVDHPLQLKHKCLYCPIEYFSRASLRSHVARVHRKGENREDAVVSPGLTQALTGYACYLCDFIGSSLPSLKRHVNRVHEDTDMYHGQIPATSFDCDACNFQCENRKEMKDHIEGHKPKPSIDGRYKCTDCDFDANLPGIVQLHMSVTHLPPKITKIPDHVNCDRCDFTCINKRVMEWHKEQHDLPPERARQILTCHECGFFSWNKTLLRRHILKKHEEPTEGCEVYMGLKSERRRKEPVHVPIPCSHCSYIAKNKTTLDFHVIRKHTGSLEHECEHCGKKFKLNHDLTRHVKVKHLDTKIYICDVCGQVYNTSNGLYTHQRYAHFKREFACHLCPKRLANQANLDEHILKQHEQRQDFICEECGKIFKESRTLKAHLRIHTGYKPYVCKVCNKSFGKGSGLRQHMLIHSDQRLYICDICGKSYAQKTGLICHRKSHPGPLPPLPALPRVAVDRVLSRLLHGRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -