Ehay029395.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:155146679-155150076[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.022 4.7 9.5 0.2 6 21 12 27 8 28 0.90 2 14 6.8 1.5e+03 1.7 0.0 2 20 34 52 33 54 0.90 3 14 1.3 2.8e+02 4.0 0.4 1 11 204 214 204 224 0.84 4 14 0.94 2e+02 4.4 2.2 1 19 344 362 344 364 0.95 5 14 3.1e-05 0.0067 18.5 0.6 2 23 370 391 370 391 0.97 6 14 0.033 7 9.0 2.4 1 23 402 424 402 424 0.95 7 14 0.47 1e+02 5.4 0.0 1 23 443 464 443 464 0.90 8 14 0.00033 0.07 15.3 0.2 2 23 470 491 469 491 0.95 9 14 5.8e-05 0.013 17.7 4.8 1 23 559 581 559 581 0.99 10 14 7.1e-06 0.0015 20.5 5.0 1 23 587 609 587 609 0.98 11 14 0.00015 0.033 16.3 4.6 1 23 615 637 615 637 0.98 12 14 1.8e-06 0.00038 22.4 0.8 1 23 643 665 643 665 0.98 13 14 4.8e-05 0.01 17.9 0.2 1 23 669 691 669 691 0.99 14 14 0.0003 0.064 15.4 0.1 1 23 699 721 699 721 0.97
Sequence Information
- Coding Sequence
- ATGGGTTCACTAAGCCTATTATGTCCAATGTGTTGTGGAGAAACTTTCAACAATCCTGAGTCGCTCAAGTATCATTTGCTCAGTGTGACTGACAATTTGTACTGCCCAGCATGTTCCACAAAAACTTACTCCATGGCTGCACTGATTCAGCATTTGGATTCTTGTGGTAAGGACTCTAATAGTTCAGGGACTGTGCAAAAGTTAGAAAATGATCAAGATTTACCAGAAGATGAGTTGAATGACAAGGACGATATGATGGAGGATGATGATATGAGTGAAGGAAGCTTCATGGCCACAGTAAATGAGGATGGAATAATGGTTGTTGGCGAAGGCAGAACCATTCAAGTGGATGAGAATGGAGATATCAGAGTCTTGGATAGAGGCCGCTCTGTGAACAAAGCAGAAGCTTTTACTTTTGCCTCTGTTCAAGACATAGATGATGCTGTGTCAAGTGTAGCTGACACATCAGAACTCATGAATGAAGATGAGTCAACAATGGTGAGCATCACTCAAGCTGAAAGTATGGGTTCAATGGATGATGTGAATTATGAAATGAAATTAGAGTCTCATCAAACTTTTGGAAATGAGCAGGTTGAAGGAGTGTCTCTGTATAGCTGCAGTACTTGCGATGTAAGTTTTGAATCAGTATTGGATCACATCAAGCAATACCATGATGGGCAAGAAGTTGTTTTAGAGATGGGTGATCAACAGCTGAAAGAGTTAGAAAGTGAATCAGAAAATGTTCCGACAGCAACAAAAGAATCACGTGCCGTGTCAGATTCACCATCCCGCCTAAATAAACAAACTTCTGTGAAATCCAAAAAGTCTATGAACACTATTAGAACTGAAGAATGTATTGATAATGAAGGAAGAATGTACACAAGAAAAGTAGTGCAAATTGAAAGATTCTGGGACCGTGCACCAGGAAACGTATCAGAAACCAAAGCGCCCATGATagagaaatttttctctaatGTCGAAGGAGTCAAGGTTCGAGATAAGATTCTTACTGTTGCGCCGACTCAAATGTACAGATGCACTCAGTGTTTGGAACAATTTGCGAAATTGAATGACTTTCAAATTCACTTTtgctttcaaaaaaataatcgCTGTGACCAGTGTGATCAAACATTTGCTAGCTCGAAGTTATTGCAAGCACATTTGAAAGAGCACGAAAATAGCGATCTCCCCTTACAGAAAATATTTCTGTGTACAGTTTGTGGTACTGAATTTCTGACACATAAGAGCCTGAGACTGCATTCAAGAATGCATGCACCAGTAAAATCGCGGCATGTTGATGCACCGGAGGGAACTGAGGAAGAAACTTTCGTCTGTGTTGAATGCGGCACAACATTGTCGGAATCGTATAGAGCAGCGCATATGGCTTTACACGCAGGAGATCCAATCACGTGCCATATTTGCaatcgaaaattcgattctgcTGAGAGCTTGGCTATGCATGCGGCCGTACACACGGAAGCGGCAAATCCTCAAATCATCAATTCTTCAAATATTGTAGATCAGTCGATAACGATATCGTCTACTGATGCCGATGGACACACCACTTTACTGTCATCAGACGCCATAAACGAAGGTGCAGCACCGCAAGGGACGGCAACTAATCTCGATGGACAAGCCAATGCCGAACCTGTAGGCATCGAGCTCTTGAAACCTTACCAGTGTCAACACTGTGGTCGAAGATTCACCAGGCCACATGAAAAAGTTAAACATGAAAGAATCCACACCGGAGAGAAACCACATTCCTGCGAGGTCTGCGGTAAGAAATTCCGCGTGTCGTATTGTCTCACACTTCACATGCGTACTCACACCGGGGTGCGGCCGTACGAATGTCAACACTGCGGCAAGCGCTTTAAAGCTTCGTCAGTCTACAACCACCATCTACTCACTCATGGTGAAGAGCGCGCTTACACCTGCCCGTACTGCCCAAAGACTTTCAAGACCCGAGTACAGTTAGCCGGTCACAAGAACAGTCACACCAAACCATTCCGCTGCACCGAGTGTTCAAGGCCGTTTGCTTCTCTGTATGCCGCCCGAGCGCACATGCAAACGCACAAAAAAGAcaataatctcaaattttcgtgTACGATTTGTGGTGCTTCTTACGGACGAGCTTTTGCACTCAAGGATCACGTAAAGCAACATGAGCAGGAAAACTCATTAATGCCACCCGAGCCTGCTCGCGAGGAGGAGGTTCACGAGCTGGACACTTTCCTTTTGCAAggcgacgagggagtggagcTTATTGTGCCTtcgccaccaccgccaccaccttGTGACAACGAGCTCGAAGATATGTAA
- Protein Sequence
- MGSLSLLCPMCCGETFNNPESLKYHLLSVTDNLYCPACSTKTYSMAALIQHLDSCGKDSNSSGTVQKLENDQDLPEDELNDKDDMMEDDDMSEGSFMATVNEDGIMVVGEGRTIQVDENGDIRVLDRGRSVNKAEAFTFASVQDIDDAVSSVADTSELMNEDESTMVSITQAESMGSMDDVNYEMKLESHQTFGNEQVEGVSLYSCSTCDVSFESVLDHIKQYHDGQEVVLEMGDQQLKELESESENVPTATKESRAVSDSPSRLNKQTSVKSKKSMNTIRTEECIDNEGRMYTRKVVQIERFWDRAPGNVSETKAPMIEKFFSNVEGVKVRDKILTVAPTQMYRCTQCLEQFAKLNDFQIHFCFQKNNRCDQCDQTFASSKLLQAHLKEHENSDLPLQKIFLCTVCGTEFLTHKSLRLHSRMHAPVKSRHVDAPEGTEEETFVCVECGTTLSESYRAAHMALHAGDPITCHICNRKFDSAESLAMHAAVHTEAANPQIINSSNIVDQSITISSTDADGHTTLLSSDAINEGAAPQGTATNLDGQANAEPVGIELLKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHSCEVCGKKFRVSYCLTLHMRTHTGVRPYECQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHMQTHKKDNNLKFSCTICGASYGRAFALKDHVKQHEQENSLMPPEPAREEEVHELDTFLLQGDEGVELIVPSPPPPPPCDNELEDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -