Ehay017161.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:14370200-14380662[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.81 1.7e+02 4.6 1.7 1 23 50 73 50 73 0.96 2 12 0.073 16 7.9 3.2 3 23 81 101 80 101 0.97 3 12 2.5e-05 0.0054 18.8 4.6 2 23 108 129 108 129 0.97 4 12 1.4e-05 0.0031 19.6 0.7 1 23 135 157 135 157 0.98 5 12 0.00031 0.066 15.4 0.7 1 23 163 185 163 185 0.94 6 12 5.7e-05 0.012 17.7 1.9 1 23 191 213 191 213 0.98 7 12 8.3e-07 0.00018 23.5 2.1 1 23 219 241 219 241 0.99 8 12 0.059 13 8.2 1.3 7 23 408 424 408 424 0.94 9 12 6.3e-05 0.013 17.6 1.0 1 23 430 452 430 452 0.95 10 12 2.2e-06 0.00048 22.1 0.6 1 23 458 480 458 480 0.95 11 12 5.5e-06 0.0012 20.9 2.6 1 23 486 508 486 508 0.98 12 12 1.5e-05 0.0033 19.5 0.3 1 23 514 536 514 536 0.97
Sequence Information
- Coding Sequence
- ATGAAAATCGTCATTGCCTTCATTATTTGGATCTTGTGTGGACAAGTTTACTCTGAAACTACGACTACGTCTATTTCCGTAGTTGAAAACCCCAACGATGTGGAAGAACAGAATCAACAAAATATAGATAGCTCTGTTCAAGACGAGTTTATGTGCGAACTTTGTTGTAGTTCTTTTGATACTAGTAGAGGTATGTCTATCCACATGCAAAAAATTCACCCGCATGAAGTACGTAAGTTCTGCAAAGTCTGCAACACTGGTTTCTCATGCTCAGCTGATTTGAGGACTCACACGACAACCCACAAAGTTAAGAAGTCAAATTCATGCAAGATTTGTAGCAGAACCTTCAAAAGGAGTTGGTGTTTGGAGAGACATCAAATGACACACGTAGACAAGAGACCTTTTTCATGCGAACAATGTGGTAAGAGGTTCAGGGACAATTGGAAATTAGGAGTTCACAAGAGGATTCATTTTGGCGAGAAACCGTATTTATGTGAAATTTGTGGAAATCAATTCTACGATTCAAGTGGTTTACGGCGACATTTCACATCTCACAAGGATGAGAGGAGTTTTCGGTGTGAAGTCTGTAGCAAGTGCTTCAAAGAGGGGTCCAAATTGAGGGAACACATGATAGTACACTCAAAGGGAGAGTTCTTCAAGTGCGAGTTATGTGACAAAAGCTACAAGTATCTAAAAAGTTTGAACAGGCACATGATTACTCATTTATTTGGTGGAGAGTCTCATGATCAATCTGATGCTGGACCTTCCAACAGTGTGACCGAATTGACAGGATATACGGAATTTCATGATGAGGATGAGTTCTCTTCGCCTTTGGGATTCAATGAAGATGATCTGAATAAAGAGGCTCACTTAACTCAAGAATTCAACGGGGACAATTCCATCACAAGTGTTGAAGACCAGCTTCAATGGGCTGCTTTAGATCAGATACCAAGTACATCAACACGTGATAGACCAGATGTAGTTGTGATTGGAAATGACAATCTTCCAGATGGACGGTACATTGAATCGGCCTGTGTATCACAAATGGCGTTTAATGAGGATATCCAAAACATACTCAGCCAAATGTCAAGGACAGCTTCGGAAATCGATGGCGTCTTCTCATGTGACGCAGACAGGATGATGGCGGAGGTGAGACAAACCGTCATTGAGGAAACTGTTACTCTGTATCGATGGAACTCGGACTGCGAGAGTAAGGATGCCAACAAAGTTTTCAATAATAAATGGCACTTGAAGACCCATCAAATAAATCACGCTGATGAGAGACCTTTTCTATGTGAACAATGTGGTAAGAGGTTCAGGGACAATTGGAAATTAGGAACTCACAAGAGGATTCATTTTGGCGAGAAACCGTATTTGTGTGAAATTTGTGGAAAACAGTTCAGTGATGGGAGTAGTCTACGACGGCATATTAAATTTCACAAAGATCAGAGGAGTTTTTCGTGTGAAATGTGTGGCAAGTGCTTCAGAGAAAGTTACAGATTAACGGAACACATGAATGTTCACTCGAAGGAAAAATTCTTTGCATGCGAGTTATGTGACCAGAGCTACAAGGCCTTGAGTAGTCTGAACAGGCACATGATTACTCATTTATTTGGGGGAGAGTTTAATAGCCAATTTGATCCTGGACCTTCCAACAGTGTGACCGAGTTGACAGGATATACGGAATTTCATGATGGAGAAAAGGCCTCTTTGCCTTTTGGGTGTAATGAAGATTTTGCAACTGTCAGTGATGCGCAACAAGATGTCTGCGTCAGCAGAAATATCAATCAAGTAGATCCACTCACAAATTCAAATCATCTCGACGCTACCATCGAAGTGACAACGCTTCCACCGGATGACGACGATGTGTTGAATGGACATCGACACTGTCGCGAAACACTTGAAAATTATCGTATGAGAATAGAAGTATCAAGGCATTGTCACGAAACACTCGTAGAGCATGCAGAACGTGGTGCAGATTGCGCCTCAAATGTACCTTCATCTGAGCAAGAGTTAGTTACAACGTCCGAAGTCAATCTTCTCGTGGAACAAAACGATCAATCACATCATGGATCACCAACGCAGATAATTGAGGGTAGATACATTAACCTTCTTTCTCAGGATGGATACGATAATATAATTGAACCATCATCTCCTGTACAGCATCAATTATTTCAACCTCATCCAGAAGAGCAAGAATATCTCTGGAGACAAGTGGCCCGTCTTCGTGTCATTCACGCAAAAAGCATAGCCGGATGA
- Protein Sequence
- MKIVIAFIIWILCGQVYSETTTTSISVVENPNDVEEQNQQNIDSSVQDEFMCELCCSSFDTSRGMSIHMQKIHPHEVRKFCKVCNTGFSCSADLRTHTTTHKVKKSNSCKICSRTFKRSWCLERHQMTHVDKRPFSCEQCGKRFRDNWKLGVHKRIHFGEKPYLCEICGNQFYDSSGLRRHFTSHKDERSFRCEVCSKCFKEGSKLREHMIVHSKGEFFKCELCDKSYKYLKSLNRHMITHLFGGESHDQSDAGPSNSVTELTGYTEFHDEDEFSSPLGFNEDDLNKEAHLTQEFNGDNSITSVEDQLQWAALDQIPSTSTRDRPDVVVIGNDNLPDGRYIESACVSQMAFNEDIQNILSQMSRTASEIDGVFSCDADRMMAEVRQTVIEETVTLYRWNSDCESKDANKVFNNKWHLKTHQINHADERPFLCEQCGKRFRDNWKLGTHKRIHFGEKPYLCEICGKQFSDGSSLRRHIKFHKDQRSFSCEMCGKCFRESYRLTEHMNVHSKEKFFACELCDQSYKALSSLNRHMITHLFGGEFNSQFDPGPSNSVTELTGYTEFHDGEKASLPFGCNEDFATVSDAQQDVCVSRNINQVDPLTNSNHLDATIEVTTLPPDDDDVLNGHRHCRETLENYRMRIEVSRHCHETLVEHAERGADCASNVPSSEQELVTTSEVNLLVEQNDQSHHGSPTQIIEGRYINLLSQDGYDNIIEPSSPVQHQLFQPHPEEQEYLWRQVARLRVIHAKSIAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -