Ehay030919.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eretmocerus hayati
Gene Symbol
-
Assembly
GCA_029851415.1
Location
CM056742.1:182352441-182357760[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 4.7e-05 0.01 18.0 1.6 1 23 286 308 286 308 0.95
2 13 0.0055 1.2 11.4 1.4 1 22 313 334 313 337 0.92
3 13 0.001 0.22 13.8 1.7 1 23 413 436 413 436 0.95
4 13 0.00013 0.028 16.6 0.2 1 23 442 465 442 465 0.97
5 13 0.00011 0.025 16.7 0.8 1 23 474 497 474 497 0.93
6 13 3.6e-06 0.00077 21.5 5.2 1 23 503 525 503 525 0.98
7 13 3.9e-06 0.00084 21.3 0.7 1 23 531 553 531 553 0.98
8 13 0.00022 0.047 15.9 4.6 1 23 559 581 559 581 0.97
9 13 1.5e-07 3.3e-05 25.8 1.3 1 23 587 609 587 609 0.99
10 13 3.3e-06 0.00072 21.6 5.4 1 23 615 637 615 637 0.99
11 13 3.6 7.8e+02 2.6 5.7 2 23 644 665 643 665 0.95
12 13 4e-06 0.00085 21.3 1.1 1 23 671 693 671 693 0.98
13 13 3.5e-08 7.6e-06 27.8 1.3 1 23 699 721 699 721 0.98

Sequence Information

Coding Sequence
ATGGCGGCTATTCCATTGAGTGAATCGACAATTTGTCGACTTTGCGCTGAAGAAAATGACAGCGGAGAATATTTATTTACCGGTGATCCAGGAGAAACGGACCTGTCCGCGATGATCAATCGATATCTGCCGCTCAAGGTTTATAATGATGGCAAATTACCTCGAACAATTTGTCCTGGTTGCAATATACAACTTGAAGCGACAGCACAATTCTTTGAGTTACTTATCAATGGACAGCGTAAACTTTGTGAAATGCTCAATCAACAGAAGGACTTTGGGCATCTTGAAATGGACTCTGGATCCTTGGATCAAAATCTTGCAGCAGCTTGCAACGCAAATCAACAAGAAATTTCTAACTATAATGATCAACATATTATAGTGAATGTGGAGGGAAACCAATCTCTTTATGAACCAGATCATGAATTGATTCCACATTTAGAAATTCTTAAACCAAAGCCTAAGAAGAGGAGGGGCCGTCCATCCAAAAATGCCACTGAGGAATCAGAGGCTGTGAATAAGGAGGGGCCTTTGCTAGTGAATGATGAAGTCAAAGAAGACAAACATGTTGATGAATTGGACGGTGAAGGTCGTCAAAAAAGATTACGCAAGATTCCTAAAAGGTTCGAGGAAACAGTGCAGGGCAAGgaatttgaaaacattttcaaaaaagatattTCTAATGACAATGATTCACTAGCTACAAATGAGCCTGGAAGAACTGTTAATAAATCTGATACATTCGGCTCATTTGAAGAACCAGGTGGCAAGAATGTGGGAGACTCTGCTTCAATTGATAAAGCCAAAAACTGTAATCAAACAGGGAATCAGCTGTCACAAatcaaaaagaaagaaaaatatacATGTCCTTACTGCGATAAGGAATTTGTACAACGCAGCAAATACATTGTTCATAAGAGTTTTCACAAAATAACCAAGTATGAGTGCACTGAATGTTATCACCAGTTTTCAAGTGCAGAAAAGTTGTCCCTTCATCAAAAAGCAACTCTCCATTCAGGGAAGAAAAAGATTGAAGTTAATGATAAAGAATTAGAGAGAGATTTCCAGGCTGGACTGGATATCGCTACTGCTAAGAATGATCAACATTCATCTTCATCAAATTCTATTCTCAGCCAAGGAGTAAGTCAAAGTTTAGCAGTTGCAAGTGAAGAAGGAGTGGCAGAAGATGAAGAGCAGGTATACCtggaatattttgattcaaGTAGGAATAAATCAACATTCAGATGCATCAAGTGTAACAAGCATTACATATCCAAAGATAGCTTAGAAAGTCATATTAAGGTTGTGCATCAAGGAGAAAAACCGTTCAAATGTGAACTTTGTTACAAAATTTTTGCATATGAATCAAGTTTGAAGGGTCACATGGAAATTGTTCACCAGAGCTTTGGATTGAATGACAATTTCTTTTGTGATTTGTGTGGTAAACAATTTAGTGACACCAGTTCACTAGTGCAACACAAACTTAATGAGCATGACGAAAATCGGCGTTACGTTTGTAATACGtgcggaaaaagtttcaaacacaAACAGCTACTTCACCGGCATCAACTCGTGCACTCGGAAGATAGACCATATCCATGTAAATCATGTGATGCATCATTCAAAACTAAAGCGAATCTTCTGAACCACCAGTCCACTCACACAGGAGAGAAGAAATTCTTTTGTGAATTGTGTAACCAAAAATTTGCTCACAAAACGAGTCTTACTTTACATTACAGGACTCATACAGGCCAGAAACCCTACAAATGCGAGTTCTGCTCGAAgagcttttctcaaaatggtAATTTACAAGAGCATTTACGGATCCACACCGGAGAAAAACCTTACCGCTGCGATCATTGTGGTCGCAAATTCACAACTTCTTCTCAGTTTAAATTACACGTTAAGCGGCATACCGGTGAACGTCCGTGGAAATGTGAGTTTTGTGAGAAATCGTTTCTACATAAAGACACCTGGAAGTGTCACGTGCGAAGACACACTGGTGAACGTCCTTTCCAGTGTACTGTTTGTAAACGTGATTTTACAGAGCAATGGGCTCTAAAAAAACACATGCGTCTTCACACAGGAGAAAAACCGTATAGCTGTGACATTTGCGGTAAGGCTTTCGCCGACTGCTCCAACTTGACCAAGCACAGAAGAGTTCATAAAACTTATCTGGATGACAGAGTCCGGAAATCATCTAATACAGCAAGAATCAATAAAGTCTCTCAAATATCTACGAACTCTCGGGTTGGTGGTGATTCCCAAAATAACGCCACCACCACTGATGAAAATTCTGAGGAGGatatgtctcaaattttttatgtCTCTTATCAAGATTCGGACCAATCTAATGATACAATGGGATTACAGTTTAGTAGGGAAGACATAGAAGATCCAGACGAATCAATCATGAACGAGAACTCTGGAGACCCTATAGCGATAGAATTCTCCGAAGAACCTCACGAGACCAACCTCCGCCTAGAAATTAGAGACGAAGATGGCAATGCCATCCCTCTGTCAATACAAGAAGCGAGGCAGTTACTatctgacggacaaatttttgatcaatctaTCAGAGGTCAAACAATTCGAATTCAAAGTCATCCCGTAGCTACGGAAATCAACCCTGACTCTGTTGTCAATCCAGAGATGAATAAGAGATCTTCCACGTTAAAAGCTTCTCTGACACCTATCCAAACAGATGCTGAGCTGATCAAAGTGCTAGAGGATGAAGACACTGAGTCAACGCCCGTTAACGAAGATGACAAACCGCAATCAGTGGACAGCCAGCAGACTATCGAGTTCAtcactcaaaatggtcaaaaagTGCGAGTTCTAGCACCTATTGATTTGGATGCAATGCAATTAGCGACGGGCTATTTGAACATTTGA
Protein Sequence
MAAIPLSESTICRLCAEENDSGEYLFTGDPGETDLSAMINRYLPLKVYNDGKLPRTICPGCNIQLEATAQFFELLINGQRKLCEMLNQQKDFGHLEMDSGSLDQNLAAACNANQQEISNYNDQHIIVNVEGNQSLYEPDHELIPHLEILKPKPKKRRGRPSKNATEESEAVNKEGPLLVNDEVKEDKHVDELDGEGRQKRLRKIPKRFEETVQGKEFENIFKKDISNDNDSLATNEPGRTVNKSDTFGSFEEPGGKNVGDSASIDKAKNCNQTGNQLSQIKKKEKYTCPYCDKEFVQRSKYIVHKSFHKITKYECTECYHQFSSAEKLSLHQKATLHSGKKKIEVNDKELERDFQAGLDIATAKNDQHSSSSNSILSQGVSQSLAVASEEGVAEDEEQVYLEYFDSSRNKSTFRCIKCNKHYISKDSLESHIKVVHQGEKPFKCELCYKIFAYESSLKGHMEIVHQSFGLNDNFFCDLCGKQFSDTSSLVQHKLNEHDENRRYVCNTCGKSFKHKQLLHRHQLVHSEDRPYPCKSCDASFKTKANLLNHQSTHTGEKKFFCELCNQKFAHKTSLTLHYRTHTGQKPYKCEFCSKSFSQNGNLQEHLRIHTGEKPYRCDHCGRKFTTSSQFKLHVKRHTGERPWKCEFCEKSFLHKDTWKCHVRRHTGERPFQCTVCKRDFTEQWALKKHMRLHTGEKPYSCDICGKAFADCSNLTKHRRVHKTYLDDRVRKSSNTARINKVSQISTNSRVGGDSQNNATTTDENSEEDMSQIFYVSYQDSDQSNDTMGLQFSREDIEDPDESIMNENSGDPIAIEFSEEPHETNLRLEIRDEDGNAIPLSIQEARQLLSDGQIFDQSIRGQTIRIQSHPVATEINPDSVVNPEMNKRSSTLKASLTPIQTDAELIKVLEDEDTESTPVNEDDKPQSVDSQQTIEFITQNGQKVRVLAPIDLDAMQLATGYLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-