Ehay001143.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:18022775-18028886[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6e-05 0.013 17.6 1.4 1 23 485 507 485 507 0.98 2 14 9.6e-05 0.021 17.0 0.2 1 23 513 536 513 536 0.98 3 14 4.7e-06 0.001 21.1 3.9 1 23 542 564 542 564 0.98 4 14 9.1e-07 0.00019 23.4 0.3 1 23 570 592 570 592 0.99 5 14 0.00011 0.023 16.8 0.3 2 23 598 619 597 619 0.94 6 14 0.013 2.7 10.3 4.0 1 23 625 647 625 648 0.95 7 14 2.6e-07 5.6e-05 25.1 1.6 1 23 654 676 654 676 0.98 8 14 0.0022 0.48 12.7 1.4 1 23 682 705 682 705 0.95 9 14 0.0085 1.8 10.9 1.2 1 23 712 734 712 734 0.98 10 14 0.00012 0.026 16.7 0.7 1 23 740 762 740 762 0.96 11 14 1.4e-05 0.0029 19.6 0.6 2 23 769 790 768 790 0.98 12 14 0.00025 0.053 15.7 0.8 1 23 796 818 796 818 0.98 13 14 1.1e-05 0.0024 19.9 3.1 2 23 825 846 824 846 0.97 14 14 6.6e-05 0.014 17.5 1.1 1 23 851 874 851 874 0.97
Sequence Information
- Coding Sequence
- ATGCAAAGCGATGAGAAGAATATATCTACAGTAAATTGTGTTGATGCAATGTCACAATCAGGTCTATGCAAGAAGAAACTGTTGATTAAAAGTGACCAGATGCTCCCCATCAAGATCCATTTGCGCATGGACACGAAGAGTATATCTGGAGTGAATCCTAGTAAGGCTGTGTCAGAACCAAATCGATACAAGAAGAAACTGGCGTTACAACGCGATCAGAAGCTTCCCATTCGATATCGATTCGCAAATGTATTCAAGCGGGAGCTGAAAATAGTCTTGGTTCGGTGCGATGCGACGAAGACTATCAACAAGAAATCAAAACACTCCGAAAAGGATGAAGTATTCGAAGGTGGTGCAGTTTCACCGTCAATATCTGAATTCCGACTCGAATATGAACCGTCCAGAGTAGATGCAGCGTCGCCATCAACTTCTGTATCCGAATACGAATCCGAATCCAAATCACTTAATGAGTTTCCAATCGAGGATACAGAGTTGAAGAATCTCAAGCACGAACAAATAGTTATCGAAGAGGAAACTGTGATGGAAAACAGTGAAGATGATCGAGAACTCCATAAGCTAAAACCGAACATCGAAAGTATGCCTGCAAATTATTCGACGGGACAATCTCTCCAAACTCTGATCTCAATTGATCTCCCTGGTGAAGAATTTCTCTCGGACACCATAGATGCTTCACCGGAAAAGTTTGATAGCAATTGCGTAACAGAGGATTCCAAAGGACTGAATACTGCAATGCCGTCGGAAGATGAACCAttcatgatgaaatattcaaaatttaccgGTATGGCGACATGCAATGTCTCGAAAGTCACTGGGACAAAAATGGAACAATATTCTACATTTCTATCTGAGCCAGTTGAAACCATAGTTGAAACGCGTGATTCCGATCCAGGACTTCAAACAGCTGAAAACTGTGAAAACTTATCGTTTTTTCCAGATGCAAAATACATCGAGGGCAAGAAATTATCGGGAGACTCGATCAAAAGAGAAGTGGTAGAGGTACGCACAGAAGATTCCACGACAGGTATTGAATTTGAGGCAACAATTGGAGGATctataaaaaatcaaaaactagagcttcatgaagaagaaaatgaagattttAGTTCAAGTTCATATTCGGAAGCTGATGATACTTTCGCCCTGGGCGATTGCGTTGTAGGCTCTCAACCCATCAAAGGCAAAGAACAAAATCAGAAGCCAGAAAACCGTCCTCAGAAGCAGTCGAGCATGTATATGTACTTGTCTTCGACCCGTGTCGTCGATGGAGGAACCATCAACACCAATTGTTTGAGGAAGAATGAACAAAGTTTGGTAAAAATTGTGGATAGTGACTCATTTTCCAAGAATAGGAATTCATATGCAATGCATGAAAAATCCCATAATCAAGTGGGTGAATATCGCTGTACATGTGATATTTGCGGCGAAAAACCTTATACCTGTGATGTTTGTGGACAACATTTTGGACGCAAGGAGACCGTCAGAAATCATTTAAAGATTCACGTAAAAACCAAATCATATGTATGCGAGATCTGTAATAGAGCTTTTCGTGAAGAAAAGCGGTTGGAAGCGCATACAAAGACTGTGCATGAAAAGATTAAACCCTTTTCGTGTGACCATTGTGGCAAGAAGTTTCCTTCTAAACATGTTTTAAAAGTTCACATGAAAATACACATGGAAGAGAGACCTTATGTATGCGACATCTGTGGCAAAGGCTTTGTTTATAAAACTGTACTAAAATCCCACATCAGAACACACAGAGATATTCTCTTACAATGTAATCTCTGTGATAAAAAGTTCAAAGAACAAAGTAGTCTGGATATTCATTTGGCTGCTCATATGGGTATAAAACTCTATTCATGTGAGGCCTGTGGCAAGGGTTACAGTTCGAAGCAATCTCTTCATTATCATTCGTTGAAGCATCACAAAGCGATAGAGCCTCATCAGTGTGATATTTGTGACCAGCGTTTTACCCGCAAAGATTCACTAGCCGTACACATAAGGAGACACACAGGAGAAAAACCCTTTGTATGTAAAGTCTGTGGTAAGGGCCACAgtcgaaattttcttttaaaaataCATATGGCTAATAAGCACACAAGTCGTGATGAAAAGTACAAATGCAAAGTCTGCGGAAAGTACATGGCAAACAAACAAACTTTAGAATTTCACATGAAGATCCATACAAATCAAGATCTATTTGAATGTGCATACTGTGGAAAGACCTTTAGGAATAAGCAACGCTTGATTCCTCATGTGCGAAACCACATGGGCGAAAAACCAtcaacttgcaaaatttgtggACGAAGCTATGCCACCGATATTTACTTGAATACGCACATGAAAACGCACGAGAAACGTAGTCTATTCAAATGTAACATTTGCGGAAAGTCTGTTCTTCAAAAACCATACTTTATCAAACACATGAAGTGGCATGAAGAGTTTAAATCTTTAACTTGCAAGATCTGCAaggagtttttcaaaaataaaagaaTGCTGACTCAACACATGAGATACCACACTAGACCGTTcttttcgtgcaaaatttgtggAATGAAGTATATTGAGAAGGACAAGTTGAGGATACATATGAAGAATAAGCACAACAGCAAGTGA
- Protein Sequence
- MQSDEKNISTVNCVDAMSQSGLCKKKLLIKSDQMLPIKIHLRMDTKSISGVNPSKAVSEPNRYKKKLALQRDQKLPIRYRFANVFKRELKIVLVRCDATKTINKKSKHSEKDEVFEGGAVSPSISEFRLEYEPSRVDAASPSTSVSEYESESKSLNEFPIEDTELKNLKHEQIVIEEETVMENSEDDRELHKLKPNIESMPANYSTGQSLQTLISIDLPGEEFLSDTIDASPEKFDSNCVTEDSKGLNTAMPSEDEPFMMKYSKFTGMATCNVSKVTGTKMEQYSTFLSEPVETIVETRDSDPGLQTAENCENLSFFPDAKYIEGKKLSGDSIKREVVEVRTEDSTTGIEFEATIGGSIKNQKLELHEEENEDFSSSSYSEADDTFALGDCVVGSQPIKGKEQNQKPENRPQKQSSMYMYLSSTRVVDGGTINTNCLRKNEQSLVKIVDSDSFSKNRNSYAMHEKSHNQVGEYRCTCDICGEKPYTCDVCGQHFGRKETVRNHLKIHVKTKSYVCEICNRAFREEKRLEAHTKTVHEKIKPFSCDHCGKKFPSKHVLKVHMKIHMEERPYVCDICGKGFVYKTVLKSHIRTHRDILLQCNLCDKKFKEQSSLDIHLAAHMGIKLYSCEACGKGYSSKQSLHYHSLKHHKAIEPHQCDICDQRFTRKDSLAVHIRRHTGEKPFVCKVCGKGHSRNFLLKIHMANKHTSRDEKYKCKVCGKYMANKQTLEFHMKIHTNQDLFECAYCGKTFRNKQRLIPHVRNHMGEKPSTCKICGRSYATDIYLNTHMKTHEKRSLFKCNICGKSVLQKPYFIKHMKWHEEFKSLTCKICKEFFKNKRMLTQHMRYHTRPFFSCKICGMKYIEKDKLRIHMKNKHNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -