Basic Information

Insect: Eretmocerus hayati
Gene Symbol: -
Assembly: GCA_029851415.1
Location: CM056742.1:38930978-38941491[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0091 1.9 10.8 2.2 1 23 179 201 179 201 0.93

2 16 0.00014 0.031 16.4 0.1 2 23 237 258 236 258 0.96

3 16 0.0043 0.92 11.8 0.7 1 23 264 286 264 286 0.97

4 16 0.00025 0.054 15.7 1.7 1 23 292 314 292 314 0.96

5 16 0.00011 0.024 16.8 0.9 1 23 320 342 320 342 0.97

6 16 2.6e-05 0.0055 18.8 3.7 1 23 348 370 348 370 0.98

7 16 1.2e-05 0.0026 19.8 1.0 2 23 377 398 376 398 0.97

8 16 2.9e-06 0.00062 21.8 0.3 1 23 406 428 406 428 0.98

9 16 0.0055 1.2 11.4 0.2 1 23 434 456 434 456 0.98

10 16 0.0099 2.1 10.6 0.6 1 23 461 483 461 483 0.94

11 16 3.2e-05 0.0068 18.5 3.3 1 23 489 511 489 511 0.98

12 16 0.001 0.22 13.7 1.0 1 23 517 539 517 539 0.96

13 16 0.0011 0.24 13.6 0.4 1 23 545 568 545 568 0.97

14 16 3.1e-05 0.0067 18.5 2.6 1 23 574 596 574 596 0.98

15 16 1.6e-06 0.00034 22.6 0.9 1 23 602 624 602 624 0.98

16 16 2.2e-05 0.0046 19.0 0.4 2 23 631 652 630 652 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0091	1.9	10.8	2.2	1	23	179	201	179	201	0.93
2	16	0.00014	0.031	16.4	0.1	2	23	237	258	236	258	0.96
3	16	0.0043	0.92	11.8	0.7	1	23	264	286	264	286	0.97
4	16	0.00025	0.054	15.7	1.7	1	23	292	314	292	314	0.96
5	16	0.00011	0.024	16.8	0.9	1	23	320	342	320	342	0.97
6	16	2.6e-05	0.0055	18.8	3.7	1	23	348	370	348	370	0.98
7	16	1.2e-05	0.0026	19.8	1.0	2	23	377	398	376	398	0.97
8	16	2.9e-06	0.00062	21.8	0.3	1	23	406	428	406	428	0.98
9	16	0.0055	1.2	11.4	0.2	1	23	434	456	434	456	0.98
10	16	0.0099	2.1	10.6	0.6	1	23	461	483	461	483	0.94
11	16	3.2e-05	0.0068	18.5	3.3	1	23	489	511	489	511	0.98
12	16	0.001	0.22	13.7	1.0	1	23	517	539	517	539	0.96
13	16	0.0011	0.24	13.6	0.4	1	23	545	568	545	568	0.97
14	16	3.1e-05	0.0067	18.5	2.6	1	23	574	596	574	596	0.98
15	16	1.6e-06	0.00034	22.6	0.9	1	23	602	624	602	624	0.98
16	16	2.2e-05	0.0046	19.0	0.4	2	23	631	652	630	652	0.96

Sequence Information

Coding Sequence: ATGGAACTGCCTGTTGGAGCTGACAGATACGAACAACAAAGTACTATTGTCACTGCGCAGAGACAGCCGTTCGAAGTAGGACCAAGGAGTTGTGATTTCAGACTCATCATCTGTGAGCCACAAGGTCTCTATAGAAAAAGTCCCACTCAACATCTGGCAGAGTTGAAGATGACGAACGATAAAGGTTCCACTGTCACAAAAGAAATGAAGTATTACAACAAGATGCACCAGAATGAGGATGATCCATCCAGCAAATTTTGCTTCCAAAATTGTATCGGTCAAAGCCAAGGACAGATGCAAACTCTAATGAGTGCACAGACTAGACTGAGCAAGGAAGACGCCATTGCAGATGCCCTTGAAAACAAGTTGAGGATTGTATTAGTTCGATGCAAGACAGGAATAGTGAACAATAATCAATCAGTTCAAAATGGAGACGGAGTATCCAGAGCCAGTCCACCACTACTGCCATCAACTTCTGAATCTGAACCCAAATCAGGTGGCGATGATTGTCCAGAGTCTACGGGCCTCCCGCAGTACCACTGTATCAAGTGTAAGAAAGGCTTCGAGCAAAACTAtgaatttcagatgcatatggAAGGTCACTCAGTTATGAGGCCATATGCTTACTTGACCCGTGGCGAGAAATACGGCAACAAGACCAACGCGGATAGGCACAAAAGAGCGCACACAATGGAAAATGTTCTAATATCCTGCGACTTGTGTGGCATGAATTTCGTGAAAAAATCGACATTAGCAGAGCACATCGAAAGTCATTCAACACCCCTACTCTTCTATTGTAATACTTGCAACTCACCCTTCAACAGCAAATCCCAAATCGCGTTGCATGTCCTGAAGCACGAGACAGGCAAGCCTTTTTCGTGTAATCTGTGTAGTAGAAAATTCACAGAACAAGGTAGTTTGAGAAATCACAAGTTGTTGCACAGGGACAATCAAGTCTACCACTGTGATAATTGCGGGGAGAAATTCACCAACAGGTGGGATATGATCGATCATTTAAATTTGCACCCGGGCATGAAACCATTTCCATGCAAGCTTTGTAATAGAGCTTACAAACACGAAAAGAGTTTGAACAAACATTTGAAGACACACACCGGTAAAAGGCTCTCCTCATGCAAAAGATGTGGGGCCGTATTTAAAAGTAGAAATGAGTTGGAAAAGCATCGAAGAATTCATGATAAACAACGCCGTACCTTATTCACTTGTGACATTTGTGGCAAAGTTTTGCCTCGGAAATCTTATTTGCGATTACATTTGGCAAAGCATGAAACCCCAATGCCGTTTACCTGTGATGTGTGTAGTAAAGGCGTCAGTACTAAGAGAGCTATGATCGGCCATTTGAAATTGCATGAGAAAGATCTCTTCTCTTGTATTGTCTGCGGTAAAGGCCACAGTGACGAAAAACAATTGACAGAGCACATGAGAATACATACCGGTGAAAAGCCATTTTCTTGCAAGATCTGTGGTAAACGATTCACGCATAGATCCTCTATGCGACCACACTTGTTAACGCACTCAGGCAAGAAATTGTTCTCTTGCGAGGTTTGTGGAAAGAAATTTAAATTGAGGCATATTCTCAATGTTCATATCTTGGAACATGGAAGTACGGGAGGTTTCTATTGCAAGTTGTGCAATGAGAAATTCGATCTCAAACCTCAATTGGATGTGCATCTAAGAATAATGCATAAAAATGCCAAGCGCTTTTCGTGCGAAAAGTGCGACAAAAAATACAAGTATCCCCACGAGCTTAGAGATCACTTAGTAACTCATACGGATGAAAGACCTTACTCGTGCCAAATATGTGACAAGAGCTTCGCAAAAAAGTCTGTCATGAGAGCTCACATGAAGTCACATCAGAAAGACAACCTACTGTCATGCAAAATATGTACCAAAAAAGTTGCGACCAAAAGTACTTTAGAAGCGCATATGGCTAGGCACACGGAAGCAGCTGTGAATGTCTACCGTTATCAATTGTAA
Protein Sequence: MELPVGADRYEQQSTIVTAQRQPFEVGPRSCDFRLIICEPQGLYRKSPTQHLAELKMTNDKGSTVTKEMKYYNKMHQNEDDPSSKFCFQNCIGQSQGQMQTLMSAQTRLSKEDAIADALENKLRIVLVRCKTGIVNNNQSVQNGDGVSRASPPLLPSTSESEPKSGGDDCPESTGLPQYHCIKCKKGFEQNYEFQMHMEGHSVMRPYAYLTRGEKYGNKTNADRHKRAHTMENVLISCDLCGMNFVKKSTLAEHIESHSTPLLFYCNTCNSPFNSKSQIALHVLKHETGKPFSCNLCSRKFTEQGSLRNHKLLHRDNQVYHCDNCGEKFTNRWDMIDHLNLHPGMKPFPCKLCNRAYKHEKSLNKHLKTHTGKRLSSCKRCGAVFKSRNELEKHRRIHDKQRRTLFTCDICGKVLPRKSYLRLHLAKHETPMPFTCDVCSKGVSTKRAMIGHLKLHEKDLFSCIVCGKGHSDEKQLTEHMRIHTGEKPFSCKICGKRFTHRSSMRPHLLTHSGKKLFSCEVCGKKFKLRHILNVHILEHGSTGGFYCKLCNEKFDLKPQLDVHLRIMHKNAKRFSCEKCDKKYKYPHELRDHLVTHTDERPYSCQICDKSFAKKSVMRAHMKSHQKDNLLSCKICTKKVATKSTLEAHMARHTEAAVNVYRYQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -