Ehay001091.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- ken
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:17440039-17441094[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.8e-05 0.0081 18.3 7.4 1 23 10 32 10 32 0.97 2 12 1.1e-05 0.0025 19.9 0.4 1 23 40 62 40 62 0.99 3 12 0.0001 0.022 16.9 0.2 1 23 68 90 68 90 0.96 4 12 4.2e-05 0.0089 18.1 0.2 1 23 96 118 96 118 0.96 5 12 2.1e-06 0.00045 22.2 0.6 1 23 124 146 124 146 0.98 6 12 6.2e-07 0.00013 23.9 1.3 3 23 154 174 152 174 0.98 7 12 6.6e-05 0.014 17.5 2.0 1 23 180 202 180 202 0.97 8 12 1.2e-05 0.0026 19.8 0.3 2 23 212 233 211 233 0.97 9 12 4.9e-05 0.01 17.9 0.2 1 23 239 262 239 262 0.94 10 12 2.4e-05 0.0052 18.9 0.5 1 23 268 290 268 290 0.98 11 12 1.1e-05 0.0023 20.0 0.7 1 23 295 317 295 317 0.98 12 12 7.2e-07 0.00016 23.7 1.3 2 23 324 345 323 345 0.96
Sequence Information
- Coding Sequence
- ATGAGATCGCACACTGGCGAAAAACCATATTCGTGTGAGATCTGTGATAAAAAATTTGGCCACAAACATCATCTAAAGAAACACTCAGCTACACATGCAGCTGGAAAACCTCAGTCCTTCAAGTGCAAGTTTTGCGATAAGATATTCATAGCCCGAGCGGAGTTGGAAAATCATGTGCAAACACACACGGGTGACAGGCCTTACTTGTGTTTAATCTGTGGCAAAGACTTTCGTATTCGAAAAGGTCTGACGGTCCACCTGAAGATACACCGAAGACACAAGTTCTTCCCATGCAATAtttgtcacaaaaaattcatcgcaCAAGAAAGTTTAGATGCGCATATGGCTGCGCATGCGGGTAAAAGACTATTCCCGTGTACAAAGTGTGAAAAGGGCTATAATAACAAGTTTGCTCTCAGAGCTCACATGTTGACTCACGAGGGTAAACAGCCTTTCGGATGTGACTATTGCAAAAAGCGTTTCGTCTCAAAGTACAGTTTGAAAGTTCACATGAAGATACACACAGGAGATAAGCCCTTTGCATGTGAAATTTGTCACAGTCGCTTTACCCAAGGTAGTACTTTGAAAGGACACATGAAGACGCACCAGAAGCCAGACGAAAAGGCCTATGTACCGTGCAAAGTGTGCGGAAAGCGTCTGGGTAACAAATTCTCATTGAAAACGCACATCAGAATCCACGCGGGTGAGAAACCTTTCCAATGTGCGGATTGCGGAAGAAACTTTAGAACGAAGAACGATCTAATTCCTCATTTACAATTGATGCACGTGGATGAGAAGCCGTACTCTTGCAAAATTTGCGGCTCAAGTTTTGGCCTCGAAAAGAATCTCAAGCAGCACATGACGGTCCATCAAAAAACTATTTTCACGTGTAATACGTGCGGCATAATAGTACGTTCCAAGAAATCCCTGAAACGCCATCAGGAAGTACACGAACGCTACAAATCTACTTCGTGCCAAGTTTGCGGACGATCATTCTCAGACAAAAGTCGTTTAAATCAACATATGAAAGATCATCTCGAAGATCATGCTGAGTag
- Protein Sequence
- MRSHTGEKPYSCEICDKKFGHKHHLKKHSATHAAGKPQSFKCKFCDKIFIARAELENHVQTHTGDRPYLCLICGKDFRIRKGLTVHLKIHRRHKFFPCNICHKKFIAQESLDAHMAAHAGKRLFPCTKCEKGYNNKFALRAHMLTHEGKQPFGCDYCKKRFVSKYSLKVHMKIHTGDKPFACEICHSRFTQGSTLKGHMKTHQKPDEKAYVPCKVCGKRLGNKFSLKTHIRIHAGEKPFQCADCGRNFRTKNDLIPHLQLMHVDEKPYSCKICGSSFGLEKNLKQHMTVHQKTIFTCNTCGIIVRSKKSLKRHQEVHERYKSTSCQVCGRSFSDKSRLNQHMKDHLEDHAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -