Ehay018831.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:38945686-38949540[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0036 0.77 12.0 0.2 1 23 109 131 109 131 0.97 2 18 1.1e-05 0.0023 20.0 1.4 3 23 167 187 166 187 0.98 3 18 3.3e-05 0.007 18.5 0.9 1 23 205 227 205 227 0.98 4 18 0.0035 0.76 12.0 0.1 2 23 234 255 233 255 0.97 5 18 1.4e-05 0.003 19.6 0.7 1 23 262 284 262 284 0.98 6 18 0.0001 0.022 16.9 1.5 1 23 290 313 290 313 0.96 7 18 0.01 2.2 10.6 4.6 1 23 319 342 319 342 0.95 8 18 7.1e-05 0.015 17.4 3.4 1 23 378 400 378 400 0.98 9 18 0.0079 1.7 11.0 1.5 2 23 407 428 406 428 0.97 10 18 0.00015 0.031 16.4 0.5 1 23 431 453 431 453 0.98 11 18 3.1e-06 0.00066 21.7 0.4 1 23 459 481 459 481 0.98 12 18 0.00027 0.058 15.6 6.7 1 23 487 509 487 509 0.98 13 18 3.5e-06 0.00076 21.5 0.4 1 23 515 537 515 537 0.98 14 18 5.1e-05 0.011 17.9 0.3 2 23 544 565 543 565 0.97 15 18 0.0012 0.25 13.6 0.8 1 23 571 593 571 593 0.99 16 18 5e-05 0.011 17.9 1.1 1 23 599 621 599 621 0.95 17 18 0.00039 0.083 15.1 0.9 2 23 654 675 653 675 0.96 18 18 6.4e-05 0.014 17.5 0.5 2 23 681 703 680 703 0.95
Sequence Information
- Coding Sequence
- ATGAGTGGAGATGTCACGATGGCGCATTTTGGAGACCTATTGTTTGATCATCATCTTCTCGAAAAGGATCGTAGCACAAGAGATATGCAATTTAAAGATGTGCAAAAAAATGTCAGCAAGGAGAAAGCAGTTGTAGGTGTTTCGAGCCGGAACTTGAAAATTCTGTTGGTTCGATGTGACTTTATTACCAATACCAAAAATACAATGCAAGAAGAGAAACATGCAGCAAGAGGGTTTGAAACAAGTGCAGGCTTACAATCTACTTCTGAATTTGGACATGAAACATGTTATGGGCAGAGGTCAAAGCCTACCGATTCTTTACAATACGACTGCAACGTTTGTGAGATAGGACTCCTTCGAAGAGCCGATCTTCAGAAGCACATGAAAACGCATTTACCCAAGCAGATAAGATCTTGCTCAACTTTCGGTAACCAGTTTGAGGATAAGATTCGTTTGGAGGATAGTGGAACAGTCCATAATACAAAAAAGCCTGTATTTTGTGACATCTGTGGCATGAAATTTGCGACGAAGGATACCCTAGCTCATCATATAAAAAGACATTCAGCATCGTTCCAGGAGTCTCAGATGGCGGTTGATGGGAGCCTGCGCGGTTACGAATGTGACATGTGCAATAAGATTTTCACACTCAAAAATACATTGAGATCTCACTTGGAATCACATCAGATTGAGAGACTGTCTACGTGTGCAATTTGTAACAAGGGACTGAGGAGTGAGGAAGCTCTGGGAGAGCACATGAAGATGCACAATGAGGAGGAGAAACTGTTTTACTGCAAGACTTGTGGCAGAGGCTTTGTTAACGAGAAGCAGTTTACGATCCACATGGAGATTCACACAAGCGAGAAACCATTCCCATGCCATATTTGTGGCACAAAGTTGAGCACTAAATTGAGTTTGCAATCGCACTTGAGGCTTACCCATGTGAATGACAAACAGTACACGTGCGAAACTTGTGGgcaaaatttcaaatatgaGCATTCTTATTATAGACATAACCTCAAGCAGCATAAGATAACAAGGACCTCTCTCCTCGAAAAACAACGCAAAAGTTCAGAGCCTAAACCCAAGTCACAATTTTGTTCCAAGGAAGAAACTAAGAACACGGATCTTCACTATTCTTGCAAGCTTTGCAACCAGAAATTCAGGTACCCACACATGCTGGAGGAACACACAAGGATGCACAATAACGCACAGATTCAAACTTGCCAAATTTGCAACAAGAGAATACCAGTGACATCTAGTATGTATCATCACATGAGAATACACAAAAAGTTTCCTTGTCACGTCTGCGACTTGGCACTCCGTACTCAAAAAAGCCTTGACAGTCACATGGCTACGCACACAGGCAAGGAAAAGTTCTCCTGTAATGTTTGCGGTGAGGACTTTAATCAGAAATCTTCACTCAAAGAACACGCATTGACGCATAAAGACGAAAAGTCACATCGTTGTCACATCTGTGATAGAAGTTTCAGTGACAAGCGACGGTTTGAGAATCATTTATTCACTCATAGCGGGGAGAAACCCTTCGTTTGCAAAACTTGCGGCAAGGCCTTTCCTCAAGGAGAACGCCTAAATAGACACATAAAAACACACATGGACGACAGGGGAAAGTCCTGCAATATTTGCGGCATGCGTTTGAAGAACGAAGGAACTTTGGCCGCACACATGAAGACACACGCAACAGAGAGACCATATCAATGTGATGAATGTGGGAGAGGCTTCATGATTAAGTGTCGTTTGGTCGAACATTTGCGAATTCACACGGGCGAGGAACCTTTTTTGTGTGGAACATGTGGATTCACGTTCAGGAGTAAGGACATGCTACAATCGCATTCTCGTATACATGCAAAAGACAGGCCTATGACAATATGTGAAATCTGCGGAATCAAATGTCTTGACATAGTCAGGCACATGCAGAAGCACGAACGGTACAAGTCTACGACCTGTCAAGTCTGCGGAAAGCCATGTACCACTGAAGAACGTTTGGAAACCCATATGGAGTTACACACCAGTAGAGCACTTTCATGCAAGTTTTGCGATAAAAAGTATGTCACGTTGGCTGCATTGAAAGTACACATCAGGAATCGTCATCCTGAGATGTCCACGATGTCTAAAATTGTCAGATTCAGAAAGAAAAGGCAACGTACGGAGTAA
- Protein Sequence
- MSGDVTMAHFGDLLFDHHLLEKDRSTRDMQFKDVQKNVSKEKAVVGVSSRNLKILLVRCDFITNTKNTMQEEKHAARGFETSAGLQSTSEFGHETCYGQRSKPTDSLQYDCNVCEIGLLRRADLQKHMKTHLPKQIRSCSTFGNQFEDKIRLEDSGTVHNTKKPVFCDICGMKFATKDTLAHHIKRHSASFQESQMAVDGSLRGYECDMCNKIFTLKNTLRSHLESHQIERLSTCAICNKGLRSEEALGEHMKMHNEEEKLFYCKTCGRGFVNEKQFTIHMEIHTSEKPFPCHICGTKLSTKLSLQSHLRLTHVNDKQYTCETCGQNFKYEHSYYRHNLKQHKITRTSLLEKQRKSSEPKPKSQFCSKEETKNTDLHYSCKLCNQKFRYPHMLEEHTRMHNNAQIQTCQICNKRIPVTSSMYHHMRIHKKFPCHVCDLALRTQKSLDSHMATHTGKEKFSCNVCGEDFNQKSSLKEHALTHKDEKSHRCHICDRSFSDKRRFENHLFTHSGEKPFVCKTCGKAFPQGERLNRHIKTHMDDRGKSCNICGMRLKNEGTLAAHMKTHATERPYQCDECGRGFMIKCRLVEHLRIHTGEEPFLCGTCGFTFRSKDMLQSHSRIHAKDRPMTICEICGIKCLDIVRHMQKHERYKSTTCQVCGKPCTTEERLETHMELHTSRALSCKFCDKKYVTLAALKVHIRNRHPEMSTMSKIVRFRKKRQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -