Ehay016903.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:10601715-10607732[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.00071 0.15 14.2 2.9 1 23 137 159 137 159 0.94 2 24 0.00025 0.054 15.7 1.7 1 23 165 187 165 187 0.96 3 24 0.00043 0.092 14.9 1.4 1 23 193 216 193 216 0.96 4 24 0.063 13 8.1 4.4 1 23 353 375 353 376 0.95 5 24 0.011 2.4 10.5 2.5 1 23 382 405 382 405 0.97 6 24 0.071 15 7.9 4.8 3 23 416 437 413 437 0.91 7 24 3.9e-05 0.0084 18.2 0.4 1 23 443 465 443 465 0.97 8 24 7.1e-05 0.015 17.4 0.6 1 23 470 493 470 493 0.96 9 24 0.00036 0.076 15.2 0.9 1 23 499 521 499 521 0.98 10 24 0.00024 0.052 15.7 6.1 1 23 525 548 525 548 0.97 11 24 0.00022 0.048 15.8 0.5 1 23 554 576 554 576 0.98 12 24 0.00012 0.027 16.6 1.1 1 23 582 605 582 605 0.95 13 24 0.00064 0.14 14.4 0.1 1 23 706 728 706 728 0.98 14 24 0.41 87 5.6 0.3 1 20 786 805 786 807 0.86 15 24 0.17 37 6.7 2.7 2 23 936 958 935 958 0.95 16 24 0.021 4.5 9.6 1.1 2 23 968 989 967 989 0.97 17 24 0.13 27 7.2 0.2 3 23 1005 1026 1003 1026 0.96 18 24 0.041 8.8 8.7 2.8 1 23 1040 1063 1040 1063 0.95 19 24 1.1e-05 0.0023 20.0 0.6 1 23 1069 1092 1069 1092 0.96 20 24 0.0014 0.3 13.3 0.7 3 23 1099 1120 1097 1120 0.93 21 24 0.0036 0.77 12.0 0.4 1 23 1125 1148 1125 1148 0.97 22 24 6.3e-07 0.00013 23.9 0.4 2 23 1155 1176 1155 1176 0.97 23 24 7.7e-07 0.00017 23.6 0.2 1 23 1182 1204 1182 1204 0.97 24 24 5.5e-07 0.00012 24.0 0.3 1 23 1210 1232 1210 1232 0.98
Sequence Information
- Coding Sequence
- ATGTCAAAACGAAAAGCCGATTCTCCGGTAGCGTTTGAAGAGACGGATGCTGACGCTCGCATTGGAGTTCAAAGCTCTGGGAGCAATACACCAACATTTCTTGCAGTTGTCAAGAGTGAACCCGTGAACGTCAGGGCAGTTGAAATATCTGGATCCACAGAAAAGCCTTTTCCTATATTTCAACAAGATGTTGAGATTGAAGCAAAAAGTAAACCTCGTCTTGAAAGTCCTCTGAACCAATCCCAAGCTCCATCCTGCCTTCCTTCACTTGCATCAGCTGCCAAAGTCATATTTCCAAATGAGAGGAATGATGTACTAATGCATGAGACGACTGAACTTAGAATTAAGAAAAAGAAGTTGGCCAAGTTAAGAGCTAGATACATGCCTGAAGGAAACGATAGAGATGGATATCTGTGCACTCAATGCAATAAAAGAATTTCTAGCAAAGATCATCTTAAGAGGCACGAGTCAATTCATAGAGGAGAGCGACCTTTCCAGTGCTCTGAATGTGATCGGTGCTTCAATCTGCAAAGCACTATGAGAGTTCATGTACTTGCTCATTACGACATTAAGCCATATGTGTGTTATAAATGTGATCTGAAATATTCTCAACGCTCTGCTCTGATGACTCACTGGAAGAATAAACATAAGAATTCGCCTCCGCCTCCACCTGTTGAGATTAGCAGCTACTTTGACAGAAATGATAGGCTCATTTTTCTTGGTATGGCCTCACCTCGACGTCCATACAAAAagcaaaatctcaaaaagtaTCTCTCAGCTTTGGAACTGACTAAGTCCAATGAAACTGATGCTGCCGATCAGGAGGTCTTGACACTGCCAAGGAAATATTTGAGAACAATCGCCCAAAGGAAGATCATCAAGACTGAAGAAGATTCGTCAGCAGAAGAATCTTCAGCAGCTGCTGACTCTTCTCTGCTTGTTCCAAAAATGGAGCCCGTATGTCAGATCGACGAAATTCAAGATAAACCTGTAGTTGTCAAACGTCAGAAGCGTAAAAAGAATCCTATTGTACACATAACATTACCAAACGGTAGATTCGCTTGTAAAAATTGTAAACAGGAGTTTAGTCAAAGGTTTAGGGTCAGACAACATTACAACATCCATCATGCTCCGAGAGTCTTCCACCAATGTCCATTTTGTGACAAGTCTTATTTATCCAGATACATGTACAATATACACGTGAATACGACTCATCGTGAGAATAGTAGTGACTATTTTGTCTGTTGCGATAAATGCGAATATCGGGCAAAGAACAAACATTATTTAAAAGCACATCAGATTCGCAGGCACTCGGGATCTTATGATTTCGAATGTGACATTTGTAAAAAGCGTTTTAAAATGAAAGTAGATCTGAAGGGTCACATGGGTGTTCATAACACTCTTGATCATATGTGCGATGCTTGCGGACGAATGTATCCCACTCAAGATTCTCTAAACAAACATGTCAGAGTCTATCACGTTAATACCTATGAATTTCGTTGCCCAGTTTGCAATCAAAAACTTCTGacgaaagaaaatttggaaaatcacaTGAAACGTCATCAAACCAAGTATAGTTGCGATCAGTGTGATTTTACATTTACAAAGAAACACTATTTGACCAGGCACAAAAAGCGAGTTCACGATGTTATTAAAAATTACGTATGTGAAGTTTGCGGTAAAGCTTTCGTTTGCAGTGCCACTCTTAGAGTTCACTACTTGACCCACACTAAAATGAAACCTTATCTTTGTAACGTATGCGGTTTAAGGTTCACTCAACGTTCTTCGATGATGCTTCATTGGAGGAAAAAACATCCAGATGCTGAGGAACCACCTCCGCCAGTAATATTGACGAATTTTTTCGGTATAGAGAGCGAAGTTCAAAGACTTACACAAGCCAATAGTAGATCGTGTCCTCCCGATTTGCCGACTGCAGTTACCCAAGGTTACGAAGAAATTCTTGTTCAAACTGCCAGAGGTCTCGACCAGGGCTCCGAACCGATGTATCAAACTCTCTACCAGGTGACGTACGTCGACGGCGAGCCTCGATTTGCACCAATTACCGATTATCAACCAGATAGTTCTGAAGATAACATCTCTCTCTCATGCAACGATTTCGTCTGCGAGGAATGCGGACTGATCTTTCCATCGGTTAAAAGATTACAAGCTCATCGATCAACTCACGATCCTTTGAAAAGGACAAAAAAAATCTACAGAAAGGGTCTTGTTCAACGCAAAAAGCAGAGGATTCAGAAAGCTCTAGAAGAACTCGAGCAACGTAAGCAGCAAATGATTGTCGTCAAAAGTCGTAAACCTGGTTCTGAAGCAAACGACGAATCTGGCATAGTCTTATCCTTTGTATGTCCTAAATGTGGATTTAGAACAGTAGATCGTACTTTTATGCTTGATCATTTTAATATGCCCGGAGGCTGCAAGCCAAAACTCGACAAAGAtgaagtgaccttgaaaaaagAACTCGAAGAGGTCGAGGAAGAAGGTCAAGATGTGGTGGCCGATGACGAGGTAAAAGTTAAGAACGAGGAGGAGATGGTTGTGGTTGGAAATATCGAGCGCGATGAAAATGCTGAGTACAACCTTCAAGATGAAAATAATGGAAATGAAGAGAAAGAGGAAGACGAACAGCAGCCACAAGAGGATACTGTAGAGTTCCTTGAAGATGATTTTAATGTGGTTGAGACAGAGTACGAAGAAGTTCATTACATTTGCAGCGATTGCGGTTTTCTCGGTTACAGCCAAGATGATATAGATTTTCACGAGTGTGAGGATGCCAAACCGAAAATGATGTCCTGTCATGCATGCACCTTTGAATGTACTACCCAGGGTGGTCTACAAAATCACATCGCCAGGAAGCACAAGGACCTGATTGATAAAGAACCGCTCGAGTGTGAAGAGTGCGGTTTCACGTCCATTAACAAAAATACAATGTACTCGCACAAACGTAAGCACAGACTAGCTAGATTTGAAAACGACGAGCATTCCTCACTGTTTGGCTGCGAAGAGTGTAGCTTTACCACAAAATCAGAAAATGCCCTCATAATCCACGTAAATAAAAATCACAGAGAGCCTACGACTTTTACCCAGCTTCAACCAAATCTTTATCAGTGTGATCAGTGCGATTATCAAAGTAAAAATAGATATGAGATGAAGGTTCATTTCACAAGAAAGCACACAGATGCTTGGAATTATGAATGCGAAGAGTGTGgtaaaaagtataaaattaAAGGTGATCTTACCAATCACATAAGATTTCAACACAGAGAGCAACCAATTATATGTGATGTATGTGGTAAAACTTGTGGAAATAGTAATTCACTTTATGTACatcaaaaatttgctcattataAAGCAGAATTTGAGTGTCCTGTATGCCATAGACGTATGGTAAGTCAAGCAAATCTTGATGAACACATTTTAAAACAGCACGAGACAAGAGAGGATGCCGTTTGTGACgagtgtggaaaaacttttcCAAAGCAAAGCAGATTAAAAATTCACATGAGGGTACATACAGGATTGAAACCTTTTGCTTGCAAGATCTGTGGTAAAGCTTTTGCAAGAAAGACTGCTTTGAGACAGCATCTATTGATACATTCAGGACAAAGGCCTTACGTTTGTGATATCTGTGGAAAGACTTTTACGCAGAAGCCCGGACTTATAAGTCATAGAAAAAGTCATCCTGGATCTCATCCACCTTTGCCCGTCGTGCGCATCGAGCATTTAGTCAGCGATATGCTATCCAATCAAGAGTGA
- Protein Sequence
- MSKRKADSPVAFEETDADARIGVQSSGSNTPTFLAVVKSEPVNVRAVEISGSTEKPFPIFQQDVEIEAKSKPRLESPLNQSQAPSCLPSLASAAKVIFPNERNDVLMHETTELRIKKKKLAKLRARYMPEGNDRDGYLCTQCNKRISSKDHLKRHESIHRGERPFQCSECDRCFNLQSTMRVHVLAHYDIKPYVCYKCDLKYSQRSALMTHWKNKHKNSPPPPPVEISSYFDRNDRLIFLGMASPRRPYKKQNLKKYLSALELTKSNETDAADQEVLTLPRKYLRTIAQRKIIKTEEDSSAEESSAAADSSLLVPKMEPVCQIDEIQDKPVVVKRQKRKKNPIVHITLPNGRFACKNCKQEFSQRFRVRQHYNIHHAPRVFHQCPFCDKSYLSRYMYNIHVNTTHRENSSDYFVCCDKCEYRAKNKHYLKAHQIRRHSGSYDFECDICKKRFKMKVDLKGHMGVHNTLDHMCDACGRMYPTQDSLNKHVRVYHVNTYEFRCPVCNQKLLTKENLENHMKRHQTKYSCDQCDFTFTKKHYLTRHKKRVHDVIKNYVCEVCGKAFVCSATLRVHYLTHTKMKPYLCNVCGLRFTQRSSMMLHWRKKHPDAEEPPPPVILTNFFGIESEVQRLTQANSRSCPPDLPTAVTQGYEEILVQTARGLDQGSEPMYQTLYQVTYVDGEPRFAPITDYQPDSSEDNISLSCNDFVCEECGLIFPSVKRLQAHRSTHDPLKRTKKIYRKGLVQRKKQRIQKALEELEQRKQQMIVVKSRKPGSEANDESGIVLSFVCPKCGFRTVDRTFMLDHFNMPGGCKPKLDKDEVTLKKELEEVEEEGQDVVADDEVKVKNEEEMVVVGNIERDENAEYNLQDENNGNEEKEEDEQQPQEDTVEFLEDDFNVVETEYEEVHYICSDCGFLGYSQDDIDFHECEDAKPKMMSCHACTFECTTQGGLQNHIARKHKDLIDKEPLECEECGFTSINKNTMYSHKRKHRLARFENDEHSSLFGCEECSFTTKSENALIIHVNKNHREPTTFTQLQPNLYQCDQCDYQSKNRYEMKVHFTRKHTDAWNYECEECGKKYKIKGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPVCHRRMVSQANLDEHILKQHETREDAVCDECGKTFPKQSRLKIHMRVHTGLKPFACKICGKAFARKTALRQHLLIHSGQRPYVCDICGKTFTQKPGLISHRKSHPGSHPPLPVVRIEHLVSDMLSNQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -