Ehay001141.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:17980841-17987854[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.37 79 5.7 3.0 1 11 8 18 8 23 0.92 2 23 0.00032 0.069 15.3 3.6 1 23 36 58 36 58 0.97 3 23 1.5e-06 0.00031 22.7 3.0 1 23 64 86 64 86 0.98 4 23 5.8e-06 0.0012 20.8 1.4 1 23 92 114 92 114 0.98 5 23 0.00064 0.14 14.4 0.2 3 23 122 142 120 142 0.98 6 23 3.7e-05 0.008 18.3 0.2 1 23 148 170 148 170 0.98 7 23 0.00096 0.21 13.8 1.9 1 23 176 198 176 198 0.96 8 23 4.2e-05 0.009 18.1 0.6 1 23 204 226 204 226 0.95 9 23 1.4e-07 2.9e-05 25.9 0.5 2 23 233 254 232 254 0.97 10 23 0.0082 1.7 10.9 0.4 1 21 260 280 260 281 0.94 11 23 3.1e-05 0.0067 18.5 5.7 2 23 289 310 288 310 0.96 12 23 1.3e-05 0.0027 19.7 5.3 1 23 316 339 316 339 0.97 13 23 0.005 1.1 11.6 7.9 1 23 345 367 345 367 0.95 14 23 0.28 61 6.1 1.2 8 23 544 559 539 559 0.94 15 23 7.2e-06 0.0016 20.5 1.5 1 23 565 587 565 587 0.96 16 23 0.081 17 7.8 7.2 1 23 594 616 594 616 0.98 17 23 0.0019 0.41 12.9 3.3 1 23 622 644 622 644 0.98 18 23 0.00014 0.031 16.4 0.2 1 23 650 672 650 672 0.97 19 23 0.00068 0.15 14.3 5.4 1 23 678 700 678 700 0.98 20 23 0.038 8.2 8.8 0.8 1 23 706 728 706 728 0.98 21 23 1.3e-05 0.0027 19.8 3.2 1 23 734 756 734 756 0.97 22 23 0.0051 1.1 11.6 0.6 1 23 762 784 762 784 0.98 23 23 0.095 20 7.5 1.4 1 23 790 812 790 812 0.98
Sequence Information
- Coding Sequence
- ATGCCTTCGCACCAAAACGTTTTCGAGTGCGAATATTGCGACAAAAGATTCAGGTGCAAAGAGATCACGGAGAAACACGAGACGCAGCATTCTGCAAGTAGGAcattttcatgcaaattttgtcaaaaaaccTTCGCTTACAAATCAAGCTGGAAGTCTCATTCAAGATTGCATACTGGAGAAGAGCTTTTTTCGTGTAAAGTGTGTGGCAAAAATTGCACGAAGGCAAGTAATTTAAAGGTTCACATGACCACGCATTCTGGCGAGAGGCCGTTTTCGTGCACATTATGTCCGAAGAAATTCAGCACAAAGTCTTATTTGGATGGTCACTTGCGGATGCATACAGGAGAGAAACGTTTTGGATGCGACTATTGTGGCAGGCGATTCGTTATGAAAAATGTACTGTTAGCCCACACTAGAATCCACACGGGTGAATATCCATTTTCATGCAAGATATGTGGTATAGGCAGCGTAAGTCAAAGTCATTTGGGAGCGcacatgaaaattcatgcaAGTGATAAGTCGTTTCCGTGCAGAGTCTgtgaaagaaaattcagaacACACAACGGTTTGATGCGGCACGAGGTGACACATACGGGGGACAAATCCTTCTTATGTGACTACTGTGGAAAGGGATTCGGTACAAAAAATGTGCTGAAATCGCACATACAACGGCACATGAGTGATTGGAGGGTCTCGTGTAAGATATGTGGTAAAGGCTTCATTAGCAAAGGCAGTTTGAAGCAGCATATGAGATCTCACTTGAATCGAAAGCCTTTCTCTTGTGATGTGTGCAACAAACGCTATTTAACCAAGGAACTGTTGACCAATCATCTGGAAAAATGGGATAATAAAAAGACTTGTTCGTGTGATATCtgcaaaaaaaagttccatAGGGCTTACTCATTGGTCAATCACATGAGAACACACACGGGCGAGATGCCATTTTCATGCACAATTTGCAACAAGAAATTTCGCTTCCAAGGTGGTTTGTGTCGTCACATGAAAAAAACACATAAAGATGGAAAGCCATTCTTGTGCCAGCATTGTGATCGAGAATTTTATCACAAACACAAGTTGACGGAGCACGTGAAGATGCACATGATTGCGGAAGAATCTTGCTACAAGGTACACAACGATAAAAATTTGGCAGGAATTGAAGGCCTGAAACAAATCCCGTCTCCTTGCATCCGAAAGCTCAGCCTCAACGAACAAGTCTCGGATGCCCTCAAACGGAAGTTGAAAATAACATTGATCCGATGTGAAGCACCAATGGACCAGAAGAAATCGAAAAAAGAAGGTATCGCATCTGGGATGAAGTCATCTTCGTCTTCAACCCACGAATTGAGAATGAAATCAGCGCCTGAACACGAGAATGTTTCAAACGAATCGACAGTAGAAGATGATGTAGAGTGTAGAGAAACACAACGACCTCATCACCCTGAACAAAAAATCGAGAACGTACCTGTGAATTTTCTGACGACTCAACTTCAGCAAGATTCCACCTCGCCTGTTTTTCCTGGCTATCAATCCGAAGACTTGGTTCCAAAGACAGAGGACGTTAATGACAACGGTGACGAGCAGCAATCGAAACCTGATAACGACCAACtttgctgcaactttcgcgagAAGAATTTCAGACATCCAGGCATGTATAAGACTCACATAAAGAGGCACATGACgaagaagatttttttttgtgacaTCTGTGGCAAGAACTTCTCCCTCAAACATAACTTAGCAAAGCACATAGGATCGCATTTGATTGGTTCTCGTATTTTCCATTGCGATTTCTGTACCAAGAGCTTTTATACGAGGCATCGAATTGTACAACATCTACGTTCTCATGTGACTGATAAGCCTTTTTCGTGTGAACTATGTGATGCTAAATTCAAAAGGACAGAATGTGCACAGAAGCACATGAAATCGCATGAAAATAATCAAGCTTACCCTTGCGATGTATGTGGCAAGAAATTCACAACACGTGACATATTGTCAGACCATGCCAGATTACACACAGGAGAAAAGCCATTTACTTGCAAGATTTGCAATAAATCATTCAGGTGTCAAAGATTCTTAATCAGACATCTGCGGGAACATACCGGTGAGACGATTTTTACATGCAGAATCTGTAAAAGTATTCTCGAGACGAGAGATGAGTTTGAGAAACATAGAGAAATGCATCGAAGTGAACGGCCTTTTGCATGTGATACCTGTGGTAAAGCTTTTAGAAGAAAGTGTTTTTTACGATATCACATTCGCATTCATGATAGTGTGAAACCATACAAGTGCGAAGTTTGTGACCGAGGTCTCTGTTCTATGATGTCTTTGGAAGGTCATTTAAGACTGCATTTGGGAGAAGGCGTCTACATATGCAGAGTCTGTTGTAAAGGTTTTGTCAAGGAAAGACAATGGATGGATCACATGAAAATACACATTGGAGATGAGCCATTCTCTTTCGAAATTCACGGAGAAAAGTTGGCCAAGAGATGCGATCCGCTGCCACATTCAGCGGTTCACTCGCTCAAGAAAATTTCGCGAAAATGA
- Protein Sequence
- MPSHQNVFECEYCDKRFRCKEITEKHETQHSASRTFSCKFCQKTFAYKSSWKSHSRLHTGEELFSCKVCGKNCTKASNLKVHMTTHSGERPFSCTLCPKKFSTKSYLDGHLRMHTGEKRFGCDYCGRRFVMKNVLLAHTRIHTGEYPFSCKICGIGSVSQSHLGAHMKIHASDKSFPCRVCERKFRTHNGLMRHEVTHTGDKSFLCDYCGKGFGTKNVLKSHIQRHMSDWRVSCKICGKGFISKGSLKQHMRSHLNRKPFSCDVCNKRYLTKELLTNHLEKWDNKKTCSCDICKKKFHRAYSLVNHMRTHTGEMPFSCTICNKKFRFQGGLCRHMKKTHKDGKPFLCQHCDREFYHKHKLTEHVKMHMIAEESCYKVHNDKNLAGIEGLKQIPSPCIRKLSLNEQVSDALKRKLKITLIRCEAPMDQKKSKKEGIASGMKSSSSSTHELRMKSAPEHENVSNESTVEDDVECRETQRPHHPEQKIENVPVNFLTTQLQQDSTSPVFPGYQSEDLVPKTEDVNDNGDEQQSKPDNDQLCCNFREKNFRHPGMYKTHIKRHMTKKIFFCDICGKNFSLKHNLAKHIGSHLIGSRIFHCDFCTKSFYTRHRIVQHLRSHVTDKPFSCELCDAKFKRTECAQKHMKSHENNQAYPCDVCGKKFTTRDILSDHARLHTGEKPFTCKICNKSFRCQRFLIRHLREHTGETIFTCRICKSILETRDEFEKHREMHRSERPFACDTCGKAFRRKCFLRYHIRIHDSVKPYKCEVCDRGLCSMMSLEGHLRLHLGEGVYICRVCCKGFVKERQWMDHMKIHIGDEPFSFEIHGEKLAKRCDPLPHSAVHSLKKISRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -