Ehay016907.2
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:10625182-10633480[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0028 0.61 12.4 0.3 1 20 263 282 263 283 0.95 2 20 0.0011 0.23 13.7 1.2 1 21 301 321 301 322 0.95 3 20 0.00025 0.053 15.7 0.4 3 23 376 397 375 397 0.93 4 20 2.5e-05 0.0054 18.8 0.5 2 23 402 424 401 424 0.95 5 20 1.6e-05 0.0034 19.4 0.2 3 23 431 451 430 451 0.95 6 20 3.9e-06 0.00085 21.3 2.4 2 23 459 481 458 481 0.95 7 20 0.017 3.6 9.9 3.0 1 23 490 512 490 512 0.98 8 20 0.085 18 7.7 0.9 2 23 519 539 518 539 0.97 9 20 0.00011 0.023 16.8 0.1 3 23 547 567 546 567 0.96 10 20 4.7e-05 0.01 18.0 6.7 1 23 573 595 573 596 0.95 11 20 0.00078 0.17 14.1 0.8 1 23 737 759 737 759 0.93 12 20 2.8e-06 0.00059 21.8 4.6 1 23 765 787 765 787 0.99 13 20 4.2e-07 8.9e-05 24.4 0.9 1 23 793 815 793 815 0.98 14 20 0.00026 0.057 15.6 0.9 3 23 823 844 822 844 0.97 15 20 0.0014 0.31 13.3 3.6 1 23 849 871 849 871 0.97 16 20 5.6e-05 0.012 17.7 1.7 1 23 880 902 880 902 0.96 17 20 0.00022 0.048 15.8 5.6 1 23 908 930 908 930 0.97 18 20 5.5e-05 0.012 17.7 0.8 2 23 937 958 936 958 0.97 19 20 4.1e-06 0.00088 21.3 1.6 1 23 964 986 964 986 0.98 20 20 1.1e-05 0.0025 19.9 0.3 1 23 992 1014 992 1014 0.98
Sequence Information
- Coding Sequence
- ATGACCAATATGTTGGGCATGAATTTACCCCAATTGAGAATAAAATCTTCCGCTGCCGTGGATGATCCAGAGACGAAGGACAAATACGAGGAGGCTGAGGCTGTAGACAGCGATGGTGGCCCCGAAGATATCGAGATCAAGCATCATCTAAATGAGGAACACAGTATCGAAGATGTTTCAGGTGATGGTGAAGATTACTTCGATGAGTCTGGCATTAGAATAGCTTCAGTAGCTTCGATGCGAACAGACTGCGAGGATCAGCAATTTCAAAGTGAGACCGACGAGCCTATGAAATCTGAGGcggatgacgacgacgacgaagtgAACGTCAATGACATCCGTGATCATGGTCCAATTCGAAATCTTTTGGTCAAACTAGAATCCGGCGCTTTTCGAAATCTGTATCAGTGCAACAGGCCCAAGCGAGAGCGGACGAGGATCCCATCGATTCTGCAACGCAAGCCAAAACCAAAATTATCGAAAGACGTCAAACAGATTATCAACACCAACGCCGCTCCTTCCGTCAACTCTGATGTAAGAATAAACATACTCGGAACCATCAACAACCATCAGGTGATCATATATCACCCTCCTGAAAACTCGATCAACCGAGCTACTGACAACTCTATCGTCATCGTTTCATCCGACGAAGAAGATACCAACACAGGTGATTTCCGATTAGAATTCCACTCTGGAGACGAAGAAGTTATCCACAGAGATGAAGGAGAAGATCAACTAAATGAAGAAGTGATCGAGACCGAATCACCAACTGTCAACATGATCGCATACGAGTGCGATTCTTGCCATGAAAACTTCCCTGATAGCTCATCTCTCATAATTCACAAAACTGAAAGATCCATAGCTCGTACCAGAGCAGCTCTTCGTGAACCCATTGCCATTCACACATGCAAAATGTGTAGAGCCAGGTTCACCTCAAAACCTAATTACATTCGTCACATTAACAACTGCGGTCTCGTCGATATGAATGCGTTACCAGAAAGCTGTAAACAAATTCGCAAACCTCGAATTATCTATCccaaaaaagagaaaaaaaccaACGAGACTGATGGACAACGCGAAACCTCAGAGaagattcattttgaaggtgaaaATCAAATAGCTCCGTGTACGCAGTGCAACAAGGTTTTCAAGAAAGACAAGTACCTCAAAGTTCATATGATTGCAGCCCATGGAGAATTATTAGTCTGTCAGATTTGcggagaaaaattcaattcgagCAACAAACTTAGGAAACACATAACTTCAATCCACGATGAGCTCAACGAGCCCTGCACCACTTGCGGAAAAGTCTTCTACTCAAGGCAATCTCTAAAAGTTCATATGGCAGCTCACAAACGGGATACAAAACTCTTACCATGCAATCAATGCGATAGAAGCTTTCGTCACGAATCGTACCTTCAAAAACACATTCAATCCTTCCACGTGGAAAATAAGGGTAGAAAAACTTATCATTGCGAAGAGTGTGGCTACGAATCAGTTTATAAAGCTTGTTTTCGAGAACACATGGCTAAACATACTGGAGAAGATCAGGTCACATGCgatatttgctcaaaaaaaATGCGAAAAGGGTATATGAAGTTACATATGAGGATACATTCTGGTGAGAGGCCTGAAATTTGTGAATATTGTGGTAAAGGATTTGCAGCGAGGAAGtatttgaaaaaacatattgTGGTTCATACAGGTGAAAAACCGCATACATGCCACGTGTGTGGTAAAAGTTATACTCAAACTGGTACATTGACCCTGCATTTAAGAAAACATCATCCAAATGAGCTTGAACCTGCAGAAAGAAGGTATCCTTGGAGGTTTGTTGGTAAAAATAAAAGGCCTCATCGGCAACAGGTTGAAAGTGTGTCTGAAGTCGAAAAATCGGCGGAGAGTCAAAATGACGGTGTCACTTTAGAGGATTCGAAATCGTCCATCAAGAAAGTTGATGATGagaatatggaaaaaaattttgaggaagtaGAAATGGTCGAAGAAGAAGTCGTCGAGGAGGAGGAGATGGCCGAAGGCTGCGAGCTCTCCGACCCATCGCCTCCATTGCCAATTCTCCAAGCACCAGATCTTCTGGAAGACCACCAACAGTTGGAGCCAGCACCACCAACAGATCAAGAATTTCACGAACTCAAGTCACTACCGCCGATCACGACAATTCTTCCAGTAATAAAAGATCCATCAGACTACGAGTGTCCATACTGTAGCAAACGTTTCAAAACCAAGATTCTCTACGATGGTCATCTTGTATCACACAGCGATGCCAGACCCTATCAATGCGAATACTGCAAGAAATGTTTCAAACGCAGCAATACTCTAGCTGTTCACCGTAGAATTCATTCTCGAGACAAGAGTCATGTTTGCGATGTCTGTGGCCGAGGTTTTGTTCAGGCTTCTCAATTGAAAACTCATCAAAGAAGACACtacgaaaaatattcaagattctgCAACGTCTGTGGAAAAGGATTTTTTACAAATGCAGAACTTCACGGACACATGAATATCAAGCACGGAGCCCAAGAGCACGTTTGTAATATCTGCTCTAAGCAAATGCCAAATGCACATACTTTGAAGAGACATATGAAGAGCCATGAACCAGGATATCAACCAATCAAACATCACTGtgaaatttgtggaaaaacttttgcattcaaaaattctttggtAGCTCATGTCAAAGCTCACAATGGAGACAACAAGCACGAGTGTCACATTTGTCACAAACAAGTTTCATCCAGAAGTTCATTACAGGATCACTTGAGATTACATACTAGTGAAAAAGAGCTTGTTTGCGACGTTTGTGGAAAAGCTTTTCATAAGAAGACTACTTTGGTTGTTCATCGAAGGATTCATACTGGAGAAAAACCCTACAGCTGCGATATTTGTGGAAAAGCTTTCAATCAACACTCGACTTTGGTTATTCACAAGAGATATCATACAGGACACCGGCCTTATGAATGTGAAAAATGTGAGAAGAGCTTTGTTTCAAGAGCTCTGTTGAATGCCCACTCAAAGGTTCATAAAAGATTTACTTTGAGCCCGAAAGAACTTGGATTGGATGATGATAATTTCAACAATGGGCAAATGATGCTGGTGATGGACAAGAGTATAGACAGGAGCATCGACGAATGTCTGGATTCTCAAGGGCTGGAAAATTGCTTTGATTCACACAGCTTGGATTCGGAGTCACTCGGAGATTTTTTACGCAAATGCCCTGATCCAGGGCATTGCCGTTGA
- Protein Sequence
- MTNMLGMNLPQLRIKSSAAVDDPETKDKYEEAEAVDSDGGPEDIEIKHHLNEEHSIEDVSGDGEDYFDESGIRIASVASMRTDCEDQQFQSETDEPMKSEADDDDDEVNVNDIRDHGPIRNLLVKLESGAFRNLYQCNRPKRERTRIPSILQRKPKPKLSKDVKQIINTNAAPSVNSDVRINILGTINNHQVIIYHPPENSINRATDNSIVIVSSDEEDTNTGDFRLEFHSGDEEVIHRDEGEDQLNEEVIETESPTVNMIAYECDSCHENFPDSSSLIIHKTERSIARTRAALREPIAIHTCKMCRARFTSKPNYIRHINNCGLVDMNALPESCKQIRKPRIIYPKKEKKTNETDGQRETSEKIHFEGENQIAPCTQCNKVFKKDKYLKVHMIAAHGELLVCQICGEKFNSSNKLRKHITSIHDELNEPCTTCGKVFYSRQSLKVHMAAHKRDTKLLPCNQCDRSFRHESYLQKHIQSFHVENKGRKTYHCEECGYESVYKACFREHMAKHTGEDQVTCDICSKKMRKGYMKLHMRIHSGERPEICEYCGKGFAARKYLKKHIVVHTGEKPHTCHVCGKSYTQTGTLTLHLRKHHPNELEPAERRYPWRFVGKNKRPHRQQVESVSEVEKSAESQNDGVTLEDSKSSIKKVDDENMEKNFEEVEMVEEEVVEEEEMAEGCELSDPSPPLPILQAPDLLEDHQQLEPAPPTDQEFHELKSLPPITTILPVIKDPSDYECPYCSKRFKTKILYDGHLVSHSDARPYQCEYCKKCFKRSNTLAVHRRIHSRDKSHVCDVCGRGFVQASQLKTHQRRHYEKYSRFCNVCGKGFFTNAELHGHMNIKHGAQEHVCNICSKQMPNAHTLKRHMKSHEPGYQPIKHHCEICGKTFAFKNSLVAHVKAHNGDNKHECHICHKQVSSRSSLQDHLRLHTSEKELVCDVCGKAFHKKTTLVVHRRIHTGEKPYSCDICGKAFNQHSTLVIHKRYHTGHRPYECEKCEKSFVSRALLNAHSKVHKRFTLSPKELGLDDDNFNNGQMMLVMDKSIDRSIDECLDSQGLENCFDSHSLDSESLGDFLRKCPDPGHCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -