Ehay001243.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:18909485-18911776[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 3.2e-05 0.0068 18.5 0.1 2 23 32 53 31 53 0.96 2 22 6.3e-05 0.013 17.6 0.2 1 23 59 81 59 81 0.97 3 22 1.3e-06 0.00028 22.9 1.3 1 23 88 110 88 110 0.98 4 22 6.8e-05 0.014 17.5 2.3 1 23 116 138 116 138 0.97 5 22 3.4e-05 0.0073 18.4 4.2 2 23 146 168 145 168 0.93 6 22 0.0096 2.1 10.7 0.2 1 22 210 231 210 234 0.89 7 22 0.18 38 6.7 0.6 1 20 245 264 245 266 0.93 8 22 1.1e-05 0.0024 19.9 0.7 1 23 271 293 271 293 0.99 9 22 6.2e-07 0.00013 23.9 0.7 2 23 300 321 300 321 0.97 10 22 0.007 1.5 11.1 0.3 1 23 327 349 327 349 0.97 11 22 3.8e-05 0.008 18.3 0.7 1 23 355 378 355 378 0.97 12 22 1.8e-06 0.00039 22.4 1.3 3 23 407 427 405 427 0.97 13 22 3.5e-06 0.00074 21.5 0.9 1 23 433 455 433 455 0.95 14 22 0.00039 0.084 15.1 3.9 1 23 461 483 461 483 0.97 15 22 0.0012 0.25 13.6 0.8 1 23 489 512 489 512 0.94 16 22 3.5e-06 0.00074 21.5 1.1 2 23 524 545 523 545 0.97 17 22 7.5e-07 0.00016 23.6 2.2 1 23 551 573 551 573 0.98 18 22 0.00021 0.045 15.9 0.2 1 21 580 600 580 601 0.97 19 22 0.015 3.2 10.1 0.7 1 23 608 630 608 630 0.96 20 22 2.9e-05 0.0063 18.6 7.6 1 23 637 659 637 659 0.97 21 22 0.15 32 6.9 0.1 3 23 695 716 694 716 0.94 22 22 0.00048 0.1 14.8 0.1 1 23 722 744 722 744 0.98
Sequence Information
- Coding Sequence
- ATGACGTACGAACCGAATTCGAGTAACAAACAGGTCATTGTCGGATCCGACTCgataaaaaatgtcaagagaaaAAAGGGTAAGGGACCACTTCCTTGCGAATATTGtggcaaaaattttccatctaaaGCTCGATTGGCTCAGCATGTACTAACTCACACGGGTGAAAAACGATTCTCATGCGAAATCTGTGGGAAAAAATTCCTCACAAGAAGTAATTTGATGGGCCATGTCCTCGTACACGAGTCCCTGCCCAAGTCTTTTTCGTGCAAAGTTTGTGAAAAAGCATTTACAAGGCAAATTTATTTGGAACGGCACCTGCAGCGGCATGCGGATGTCAGACACTTCGATTGTGAGTTATGTGGTAGTAAATTTCGTCACAGGTATCTATTGGTTAATCACATTAAGACCCATGCGAATGTAAAAGAAGAACTTCCATGCAAAATTTGCGGAAGAACCTTTCATCATAAGCGAAATCTGAGGAGACATGAAATAATGAAACATGGCACCGAAAATAATACAAAAATTGAACCATTAATAAGCAACAGTAACGGCAATCACATGCATTTTGATGATGGGCAACAATTGACGGAGCCGTCGGTAACGCATGTAAGTTGTGAGACATCATTCTCATGCAAAGTTTGCAAAGTTAGCTTTTCTCaagaagaaattttgagaaagcatGAGATTACGGCTGAACACTTCAACGGCGACTCTACTAGAAAGGAACCTTATAATTGTGCTTTTTGCGGTAATAGTTTCAACTGTAAAGCTGATCTAGAGGCACACTATGAATCGTACCAAAAATCTTTCACATGCGATACGtgtgaaaaaatctacaaatctagAAAAGGTTTAATTGAACACATACGCACGCATGGAAGTACGAAGACTAACGTATGCAAGATCTGTAGTAAAGAATTTGTAAGTTCTAGTAGTCTCCAAAGACACATGGATACGCATTCGGATAAAAGACCTCACGTATGCAAAATATGTGGGGCAAAATTTAAGATCAAAGGAATCTTGGACGTACACATGAAAATTCACACTGGGGAGAAACCTTTTAAATGCGATCAATGTGAAAAAAGCTACACCACAAAGTACGTGCTGGAATGGCATTTGTCATCAGTCCATTCAGTTTCTATCGTCAAAACCGTCGTAAATAGTAATCATCTGAAGAATCACAGACCAATTGACACCGACTACAATAAACTTTTTTGCCAGATTTGtggcaagattttcaaaaacaaacaagctttgaaatacCATATGAATAAACACGCTGGTGTAAAACCTTATCCTTGTGACATTTGCGGTAaacatttttccacaaaaatcaaTGTGAAGAGACACTTGGTATTGCATACAGGCGAGACACCATATGAATGTCAGGTTTGTGGTAAAAAGTTTAAGCAAAGTTTTAGTCTCAAGTGTCATTTAGTGACACATACGCATGATAAACCTCATCCTTGTGAGTATTGTGGCAAGAAATTCAAATGGATAATGACTCTGAATCGGCATATATTGAATGCGCACGAGGATGTAGATCTCTCTACGATCACTATTAAATCGTGTGAAttttgtgggaaaaaatttgctCGTACTGGAGAGTTGACCTCTCACTTACGAACCCACACGGTTGCAAAGCCTTTTACATGCAAAATCTGTAGCAAAAAGTTTATCCAGAAGGCGACTTTGAAAAGTCATATGAATATGCATATTAGAGAGAAGAATTCTTACAAGTGTGATGCATGTGGCCGGCAGTTCAAATCCAAAGCTAGTATAGAGAGACACTTGAGATTGTACAAGAATACTGAAGTTTTCTCATGCAAGATTTGCGATATGATTTTCGTATCCGGAAAAGATCTTAAATTCCACACGAAGATACATACATCTGAAAAATACAAACATTCGTGTAAAATCTGTGGAAGAGGCTTTGTACGTCGAAAACATCTAAAAAAGCATATCCATCGGCACAAAGGAGAGGAGCTTCTCTCTTGTGATTTGTGCGATGTGAAGTCTAGATGTAAAGCTATATTGCAGAAGCACATAAGTGAACACATGGATGGCGAGGCGAATCCGTGCAATGATTGCGAGAACAATTATATTCAAGAGAACAAGCTGGAAGAACATCTATTACAGGATCACTCAGATGAAAAACCTTTTGTGTGTGGATCCTGTGGCATTAGATTTGAGGGAGAAAGCTTGTTAATGGAACATTTGAAAACCCATCTCATACAGGCATCTGAAATGAAGAATCCTGCATCGGAAGAAGGTGAGcaaatttcataa
- Protein Sequence
- MTYEPNSSNKQVIVGSDSIKNVKRKKGKGPLPCEYCGKNFPSKARLAQHVLTHTGEKRFSCEICGKKFLTRSNLMGHVLVHESLPKSFSCKVCEKAFTRQIYLERHLQRHADVRHFDCELCGSKFRHRYLLVNHIKTHANVKEELPCKICGRTFHHKRNLRRHEIMKHGTENNTKIEPLISNSNGNHMHFDDGQQLTEPSVTHVSCETSFSCKVCKVSFSQEEILRKHEITAEHFNGDSTRKEPYNCAFCGNSFNCKADLEAHYESYQKSFTCDTCEKIYKSRKGLIEHIRTHGSTKTNVCKICSKEFVSSSSLQRHMDTHSDKRPHVCKICGAKFKIKGILDVHMKIHTGEKPFKCDQCEKSYTTKYVLEWHLSSVHSVSIVKTVVNSNHLKNHRPIDTDYNKLFCQICGKIFKNKQALKYHMNKHAGVKPYPCDICGKHFSTKINVKRHLVLHTGETPYECQVCGKKFKQSFSLKCHLVTHTHDKPHPCEYCGKKFKWIMTLNRHILNAHEDVDLSTITIKSCEFCGKKFARTGELTSHLRTHTVAKPFTCKICSKKFIQKATLKSHMNMHIREKNSYKCDACGRQFKSKASIERHLRLYKNTEVFSCKICDMIFVSGKDLKFHTKIHTSEKYKHSCKICGRGFVRRKHLKKHIHRHKGEELLSCDLCDVKSRCKAILQKHISEHMDGEANPCNDCENNYIQENKLEEHLLQDHSDEKPFVCGSCGIRFEGESLLMEHLKTHLIQASEMKNPASEEGEQIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -