Ehay047257.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056744.1:19708865-19713254[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.013 2.8 10.3 1.2 1 23 89 111 89 111 0.93 2 26 9.5e-05 0.02 17.0 3.0 1 23 117 139 117 139 0.99 3 26 1.5e-05 0.0032 19.5 2.5 1 23 145 167 145 167 0.98 4 26 7.5e-06 0.0016 20.5 0.7 1 23 173 195 173 195 0.98 5 26 0.0034 0.73 12.1 3.1 1 23 201 223 201 223 0.96 6 26 6.6e-06 0.0014 20.6 0.2 1 23 237 260 237 260 0.94 7 26 5.3e-08 1.1e-05 27.2 0.5 2 23 272 293 271 293 0.97 8 26 8.1e-05 0.017 17.2 0.1 1 23 299 321 299 321 0.97 9 26 0.043 9.1 8.7 0.3 2 23 329 351 328 351 0.95 10 26 8.1e-05 0.017 17.2 0.1 1 23 362 384 362 384 0.98 11 26 0.0012 0.27 13.5 1.2 2 23 389 410 388 410 0.96 12 26 0.081 17 7.8 3.1 2 23 417 438 416 438 0.96 13 26 3.7e-05 0.0079 18.3 0.9 1 23 444 466 444 466 0.96 14 26 1.1e-05 0.0025 19.9 0.3 1 23 472 494 472 494 0.98 15 26 1e-05 0.0022 20.0 1.2 1 23 499 521 499 521 0.98 16 26 1.6e-05 0.0034 19.4 1.1 1 23 527 549 527 549 0.98 17 26 2.6e-05 0.0055 18.8 0.7 1 23 555 577 555 577 0.98 18 26 2.8e-05 0.0059 18.7 2.7 1 23 583 606 583 606 0.95 19 26 0.0038 0.82 11.9 6.0 1 23 612 635 612 635 0.88 20 26 2.3e-05 0.005 18.9 0.1 1 23 647 669 647 669 0.98 21 26 0.072 15 7.9 0.4 1 23 677 699 677 699 0.96 22 26 3e-06 0.00063 21.7 1.6 1 23 705 727 705 727 0.98 23 26 0.044 9.5 8.6 2.5 1 23 761 784 761 784 0.79 24 26 0.0014 0.3 13.3 1.0 3 23 792 812 791 812 0.97 25 26 0.00064 0.14 14.4 0.4 1 23 818 840 818 840 0.95 26 26 0.74 1.6e+02 4.7 0.3 1 23 846 868 846 869 0.91
Sequence Information
- Coding Sequence
- ATGAAGCACATGAAAGAAGAGCCGCTAAGTGTTGGAGCAGGAATAGAATTTATTTCTATGAAACATGAAAAACTTGAgatcaaagaagaagaagaagaggatcCTTCATCCGACTACCCTATCATTAAAAATCTTCAAACACCAAGTCAGCGAAAGCTCTCACAATCACAAAAGAGAAAAGCCCCTCCACAGACAGATGATGGGCTATCAAATGGAACTGCTAATCCAAAGAAGCATCAAAAGCATAAGAAGAATATTTCGCAGTTTTACTGCATTACGTGCAGCAAAGACTTGAAGAATAAAAGCGGATATGAAAGACACATGTTGATGCACACAGGAGAAAGGGCTTATAAATGTGAGATATGTGACATGAGATTTCGAACAGTGGGCCATTTGAATTTCCATATGCGGAAGCACTCAGGTGACAAACCTTATTTTTGCAAGGTGTGTGGAAAAAGTTTTTTCGCAAATTATATGCTTAGGAATCACACAAGAACGCATACGGGCGAGAAACCGTTTGAATGTGACACGTGTAAGAAAAAATTTGGTAGCAGGACAGCTTTGACAAGACACATGGCAGTGCATGCCGATATTAGACCCTTTATTTGTGACTACTGcggtaaaaatttcactttgaGATGTCGATTATTTATGCACATATTGCAACATATGAAAGTGAATACAAAAAAAGCAAAGAAAGCAAAGAATTTTTTGTGCGAAATTTGTGGCAAAAGTTATGTTGAGAAAAGTACCCTTACAATTCACATGAAAGAAATGCACCGATCCCTCCTTGAAGCTGAAGTCAAGCTTTTACCATGCGAAATTTGCGGAAAGGACTTCAAAAGTTCACGTAATTTGAAGAGACATATGATAACACACACGGGTGAGAAACCATTTGCGTGTGAGACCTGCGGTGGCAGATTCAGTGATAAGCGGGGCCTGAAACTTCACATGATAGTACATCAAACCGATAGGACTGTCATCTCTTGCGAGATCTGTGCCAAAGGTTTCCTACACCCTGCATCTCTCAGTAAGCACTTAGCGAAGAAACATAAGAGTAAGGAGCCGACTGTAACAAGGCCATTTCCTTGCAACATCTGTGGTGTTAGCTTCAATTACAAAATTGATTTAGACACGCATTTGGACACACACGAAAAACTATCTTCGTGCGATACTTGCGGGAaggaatttcaatcaaaaaaaagGTTGACtgatcacgaaaaaattcacaggCGCACTAATAAACTTTCGTGCAACATCTGTTGCAAGAGCTTTCTGAGTTCGTCTGGACTCAGGAGACACAGTCGCTTGCACTCGGACGAAATGCCTTTCTCGTGCACCATCTGTGAAAGCAAATTTAAGTCTAAAGACAATTTAAGAAATCATCTGATTGCACATACTGGAGAGAAAAGTTTCAGCTGCCAAGTGTGTAGCAAGAGCTTCGCTTTGAAGGGATCCCTGAAAGTGCACATGCTAATTCACACAGGCAAACAGTTCGTTTGTCAAATTTGCGGCAGAGCTTATCGAGATCGGTCTCGTTTACATAATCACATGAGTGTGCATACCGGTGAAAAGCCCTTCTCGTGTGACATGTGCGGGAAGGCTTTCAGGTTGAAACGTGAGATTTTTATGCACATGAGAACGCACACGGGTGAAAAACCTTACTCTTGCAAATTGTGCGGACGTCAGTTCGCAGCTAAAAATACCTTGAACAAACATGTGAGAATACACACGGGCGAAAAACCCTTCATGTGCAAAGTCTGCGGCAGAGGATTCACACAACATTACACTCTCAAATCCCACATATTGTATACTCACACAAAGACAAAGGCTCATTCGTGCAAAATCTGCGGAAAATTCTTCAAACGCAAGGAGTCTGTAAGGTCCCACTGTATGAAAGATCATCACGAAGATGCCGATCCCGCGTTCATAAAACCATTTTCGTGCGAGGCCTGTGGCGAGCGTTTTATTCAAAAAGGACTCCTAGCCACGCATATGCTCACGCACCCCAGTCTACGAGACAGTGTCTACAGTTGTGTAATCTGCAATCGCAATTTCGTGGGAGAAAAGTTGCGAGACAAACACATGAGTTTGCATATAAATGAGAAATCTTATTCGTGCAATTTTTGCGAAGAAAAATTTAGCCGCAAATCTGATTTGAATGCGCACTTGAAACAGCATGGCGGTAGAAAACGACTCCTTTGTAAAAACCGTGGTAAGAGCCACACCTCGAAGAAGTGTTTGAATGAACATACTAGTAAGACACGCGCCAAAGAGTTTCACTCGTGtcaaatttgtggaaaaaaatttgcgaccTTGGGTCGCTTTTTTAAAGCCCATATGCAAAAGCATACGAACGACAGCCATTCCTTTTGTGATCTCTGTGGCTCAAAGTTCAAAAGTAAAGTTAGATTGGAAAAGCATATAATCAGACACATGGACAGTAAGAAATTTTTGTGCGATACCTGCGACATCGGCTTCATCAATGAGAAGATGTTGAAAAAGCACTTAGAAAAGCATCCAGATGAAGAGTTGTTTTCATGCATAGTTTGCGGCAGCAGATTCGGGTCAGAAATTTTATTAACCGAACACACGGAGATTCATCATTTGCAAACATCTGACATGAAAACTGAACCTACAGGGACTTATACTTGTGCTCCATTTACTCAAAACAAAGGAAGAACATCACCAACAATtgaatttgaaggaaaatatCAGATAGAAGAAATTGATGTCAATTACGAAATCGACAGCATCAAGAGGGAAACCATTGTATATGATGAACTGCGAACGTTTAAAAGTGAAGAACGTGATTCGACTTGTTTAGCAGAAGTATTAGGCCTGTAG
- Protein Sequence
- MKHMKEEPLSVGAGIEFISMKHEKLEIKEEEEEDPSSDYPIIKNLQTPSQRKLSQSQKRKAPPQTDDGLSNGTANPKKHQKHKKNISQFYCITCSKDLKNKSGYERHMLMHTGERAYKCEICDMRFRTVGHLNFHMRKHSGDKPYFCKVCGKSFFANYMLRNHTRTHTGEKPFECDTCKKKFGSRTALTRHMAVHADIRPFICDYCGKNFTLRCRLFMHILQHMKVNTKKAKKAKNFLCEICGKSYVEKSTLTIHMKEMHRSLLEAEVKLLPCEICGKDFKSSRNLKRHMITHTGEKPFACETCGGRFSDKRGLKLHMIVHQTDRTVISCEICAKGFLHPASLSKHLAKKHKSKEPTVTRPFPCNICGVSFNYKIDLDTHLDTHEKLSSCDTCGKEFQSKKRLTDHEKIHRRTNKLSCNICCKSFLSSSGLRRHSRLHSDEMPFSCTICESKFKSKDNLRNHLIAHTGEKSFSCQVCSKSFALKGSLKVHMLIHTGKQFVCQICGRAYRDRSRLHNHMSVHTGEKPFSCDMCGKAFRLKREIFMHMRTHTGEKPYSCKLCGRQFAAKNTLNKHVRIHTGEKPFMCKVCGRGFTQHYTLKSHILYTHTKTKAHSCKICGKFFKRKESVRSHCMKDHHEDADPAFIKPFSCEACGERFIQKGLLATHMLTHPSLRDSVYSCVICNRNFVGEKLRDKHMSLHINEKSYSCNFCEEKFSRKSDLNAHLKQHGGRKRLLCKNRGKSHTSKKCLNEHTSKTRAKEFHSCQICGKKFATLGRFFKAHMQKHTNDSHSFCDLCGSKFKSKVRLEKHIIRHMDSKKFLCDTCDIGFINEKMLKKHLEKHPDEELFSCIVCGSRFGSEILLTEHTEIHHLQTSDMKTEPTGTYTCAPFTQNKGRTSPTIEFEGKYQIEEIDVNYEIDSIKRETIVYDELRTFKSEERDSTCLAEVLGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -