Ehay004030.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:63074405-63085838[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 2.9e-05 0.0062 18.6 4.7 1 23 147 169 147 169 0.98 2 27 0.045 9.6 8.6 0.8 3 23 205 225 203 225 0.94 3 27 2.9e-07 6.3e-05 24.9 3.0 1 23 258 280 258 280 0.98 4 27 0.00015 0.031 16.4 2.2 1 23 297 319 297 319 0.98 5 27 6.1e-05 0.013 17.6 0.3 3 23 355 375 353 375 0.97 6 27 0.062 13 8.1 1.6 9 23 377 391 376 391 0.95 7 27 0.00074 0.16 14.2 0.2 3 23 427 447 425 447 0.97 8 27 0.00018 0.038 16.2 0.2 1 23 453 476 453 476 0.95 9 27 3.1 6.6e+02 2.8 2.7 1 19 481 499 481 503 0.70 10 27 4.6e-06 0.00098 21.1 0.5 1 23 537 559 537 559 0.97 11 27 5.7e-07 0.00012 24.0 3.0 1 23 565 588 565 588 0.96 12 27 1.3e-05 0.0029 19.7 1.1 1 23 594 616 594 616 0.98 13 27 0.00038 0.081 15.1 3.3 1 23 619 641 619 641 0.96 14 27 0.00013 0.028 16.6 2.1 2 23 648 669 647 669 0.97 15 27 0.0087 1.9 10.8 0.1 1 23 675 698 675 698 0.91 16 27 5.8e-06 0.0012 20.8 0.6 2 23 705 727 704 727 0.96 17 27 2.2e-07 4.6e-05 25.3 1.3 2 23 733 754 732 754 0.96 18 27 0.00036 0.077 15.2 3.7 2 23 761 782 760 782 0.96 19 27 2.4e-05 0.005 18.9 0.1 1 23 787 809 787 809 0.97 20 27 7.4e-06 0.0016 20.5 1.1 1 23 815 837 815 837 0.98 21 27 4.4e-05 0.0094 18.0 0.8 1 23 843 865 843 865 0.98 22 27 0.00015 0.032 16.4 2.7 1 23 871 893 871 893 0.97 23 27 0.27 58 6.1 0.3 2 20 906 923 905 925 0.90 24 27 9.5e-05 0.02 17.0 0.1 2 23 933 954 932 954 0.93 25 27 0.00019 0.041 16.0 0.5 1 23 960 982 960 982 0.98 26 27 0.00061 0.13 14.5 3.2 2 23 988 1009 988 1009 0.98 27 27 0.00039 0.083 15.1 4.5 1 23 1014 1036 1014 1036 0.98
Sequence Information
- Coding Sequence
- ATGGATCAAGAAAACTCAACGAAGCCTTTCCTCAAGTTTTCGGAGTATCATGCTGAGCTGGAAATTCTGGAACCGATCGAAGATCCTCTCGTCTCTCTCATCACTATCGAAGATCCCCTTTTGGAACGTGACTCTAATAACACAAGTATTATTAGTAGCACAAGCAACGAGATGCTTCACAGCCAGCCTCGAACTGAGGGGTGGAGTAACTTGGAAACGACGCATGGTGATGTAGACACAGAACTACTTGTCGATTTTGAAGCCACCTTACATCACGAAAATTATTTGGAGGATCCCGAATTGGAGCGAAAATTTGATATCGAAAGCTTAACCTCCACCGAAACACCAGCTGACCAAGAGCATCATCAACAGTATCTCAAAGATGGCTTGCATTCAGACTTGGATGAACATCAAAAACTACACAGAGACAATAGGCCTTTCTCATGCAAGATTTGCGGTAAAAGATTCTTAAGGAAAGATCACGCAAAACGCCACATGAAGACGCATGATGACTCTGAGTCCTCTTCCAGTGAAATCTACGAAAGAGAATATGTCACCAGATCCAGACTACATACACCTTTGCAAATTCTTCCGAgtgaaaaaatattctggtGTGACAATTGTGGTAAGGGATTCATCACTAAAACAAGATTGAGGTTCCATGTGGAGAGGCACATGGGTATCAAACCTCTTCAACGCGTAGTTTGGGGTAAAATGCTCGACAGtagattgagaaaaaatgaagCGAGGCATAAAAGTATTAAACGACCTTTTCCATGCAAGATTTGTGGTAAGAAATTCACGAGAAAAGATCACGTAACGCGTCATATTAAATTGCATGATAGAAATCACTCAATTGAAGCGAGGCATAAAAGTATCAAACAATCTTTCCCATGCAAGATTTGTGGTAaggaattcttgaaaaaagaacACGTAACGCGGCATATGaaattgcacgatagaaattacTTCCCTTCCAGCAAAATTTGCGAAAAAGGAAATGCTACCAAGTCGCGTCTACAAAAGTTAGTGGAGCTAATCCAAAGCGAAAAATCGTTCTGGTGTGATACTTGCGGTGAAGGATTTACCACGAAAGGACAGTTGAAGTCTCATGTAAAAGCACACATGGTTTTTACAAGGAAAGATCATGTAAAGCGCCATATGAAATTGCATGATGGAAATAGCTCCTCTTCGAGCGAAATCCGCGAAAAAGAAAACGCTACCAGGTCACGACTACAGACGCGTGCGGAGGTTCTTCAAAGCGAAAAATCATTCTGGTGTAACGTTTGCGGTGAGGAATTTTCCGTGAAAAAACGGTTGAAGTCTCATATCATGGCACACATGGTTCTGAAACCTTTCAAATGTCACATCTGTGGCAAAGGATTCATGCCTCTCATGGCTCTCAAACAGCATATAGTCATTGAACACAATGAAAAGCTGTTCTCATGTGACATCTGCGGTAAAACGTCCCTCCACGCTCGGAATTGTGATAAGCACAAGCTCATACACCTGAATAAAAGAGTTTCCTCTAAGGAAATGTCCGAAAATGGGGTCGATGTAGTTGGGGATCTCTCTGTTGATAAAACGGAAACCCCAAATGATGAGACATTCTCGTGTGAAGTATGCGGTCGAGAATTTAGCTCGTTGAGCAGTTTGAGGAATCACTCAAAAGTTCATTCGAACGCAGTACCTTACACGTGTGATGTGTGCGGTAAGAACTTCAAGCataaatcaaaattaaaaaGACACATTGTGAAAGTACACGATGGATCGAATTTCTTCCGGTGTGACATTTGCGACAAGATTTTTCAGCTCAAATCAAGTTTGACGAATCATTTGAAGCTTCACAAGCTTCACTACTGCCGTCAGTGTGgtaaaaattataataaattaaGCTCTCTCAAACGTCATGAGATGATACACAAAGACGAAAGGCCAGTCTCATGCGATCTTTGTAAAAAGTCATTTAGGTGCAAGTCGAATTTGATAGCACACATGGTAACCCATACGGAAGAAAGGCCATATTCTTGCAAAATGTGTGATCTTCGTTTTAAACGTGGAATAGACTTGAATGGACATGTCAGCGCTATTCACAAAACTGGAGGTTCTTTGTCATGCCATATTTGCGGcgagtcgtttgcaaccagctaTAAACTGTTGGTTCACGTGAGGAGAGATCAtaagaaaatatttttaatgTGCGAAATCTGTGGAAAGACCTTCGTTCTCAATTCACACTTAAAAAGGCATTTAAGGGTACATAGTGGTGAGAAGCTGTGCTCTTGTGACATATGTGGCAAAAAATTTGGTACAAAACGCCACGTGCAGTTGCATATTGAAAGGCACAAGACCCGGTCATTTCCATGCAATATTTGTGGTAAGATTCTGAAGTCTGAATCTTCTTTGGAGATACATATCAAATTCCACAATGGGGAAAAACCATTCCCATGCCGAGTGTGCGACAAACGTTTCGCGTACAAGGGGACATTGAGGATGCATTTGAAAACACACACTGGGACAGAAGCTTTTTCGTGCAACGTGTGCGGACAACGCTACGTTGCGAGGAAAGAATTCGAAACTCATATGAGGACGCATACTGGTGAGAGGCCCTTTGCGTGCGAAGTGTGTGGTAAGCGTTATTCGAGTCTAAAATACGCGAAGCATCACATGAAAAGACATACAAATCCTCCTGAGCGCGTCACTATCCCACCGGTCAAATGCGACATTTGCAATAGAGAATTGAGAAAGAAGTCTTTGGCAAAACACAAGACATTGTGTAGAAGTGGGAATAGAATACCATGTGATATGTGTGATCAAACATTCAGTTCAAAAGTAACCTTGTGGAGACATAAAATAGCCCATACTGGCGAAAAACGTTTTGAATGCGACACATGTGGTGCTCGTTTCTACGTTAAAAAAGAATTATACACGCACATGATGGAGCATATGGGAGGTTGGCCTCAGTGTGAAATTTGCGGAAGGGAGTTCAAAAAGAAATGTTTTCTCGTAAAGCACAGGGCGACTCACGAGATCGATAAGTTTTCATGCCATGTTTGCAAGAAGACTTTTAGTGTGAAGAAAGTGTTAGAGATGCACATGCACATACACGATTGTTAG
- Protein Sequence
- MDQENSTKPFLKFSEYHAELEILEPIEDPLVSLITIEDPLLERDSNNTSIISSTSNEMLHSQPRTEGWSNLETTHGDVDTELLVDFEATLHHENYLEDPELERKFDIESLTSTETPADQEHHQQYLKDGLHSDLDEHQKLHRDNRPFSCKICGKRFLRKDHAKRHMKTHDDSESSSSEIYEREYVTRSRLHTPLQILPSEKIFWCDNCGKGFITKTRLRFHVERHMGIKPLQRVVWGKMLDSRLRKNEARHKSIKRPFPCKICGKKFTRKDHVTRHIKLHDRNHSIEARHKSIKQSFPCKICGKEFLKKEHVTRHMKLHDRNYFPSSKICEKGNATKSRLQKLVELIQSEKSFWCDTCGEGFTTKGQLKSHVKAHMVFTRKDHVKRHMKLHDGNSSSSSEIREKENATRSRLQTRAEVLQSEKSFWCNVCGEEFSVKKRLKSHIMAHMVLKPFKCHICGKGFMPLMALKQHIVIEHNEKLFSCDICGKTSLHARNCDKHKLIHLNKRVSSKEMSENGVDVVGDLSVDKTETPNDETFSCEVCGREFSSLSSLRNHSKVHSNAVPYTCDVCGKNFKHKSKLKRHIVKVHDGSNFFRCDICDKIFQLKSSLTNHLKLHKLHYCRQCGKNYNKLSSLKRHEMIHKDERPVSCDLCKKSFRCKSNLIAHMVTHTEERPYSCKMCDLRFKRGIDLNGHVSAIHKTGGSLSCHICGESFATSYKLLVHVRRDHKKIFLMCEICGKTFVLNSHLKRHLRVHSGEKLCSCDICGKKFGTKRHVQLHIERHKTRSFPCNICGKILKSESSLEIHIKFHNGEKPFPCRVCDKRFAYKGTLRMHLKTHTGTEAFSCNVCGQRYVARKEFETHMRTHTGERPFACEVCGKRYSSLKYAKHHMKRHTNPPERVTIPPVKCDICNRELRKKSLAKHKTLCRSGNRIPCDMCDQTFSSKVTLWRHKIAHTGEKRFECDTCGARFYVKKELYTHMMEHMGGWPQCEICGREFKKKCFLVKHRATHEIDKFSCHVCKKTFSVKKVLEMHMHIHDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -