Ehay001100.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eretmocerus hayati
Gene Symbol
-
Assembly
GCA_029851415.1
Location
CM056741.1:17588789-17591023[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 9.2e-05 0.02 17.0 2.6 1 23 22 44 22 44 0.99
2 25 0.00019 0.041 16.0 1.1 1 23 50 72 50 72 0.97
3 25 6.8e-05 0.015 17.4 1.2 1 23 79 101 79 101 0.97
4 25 4.1e-05 0.0088 18.1 1.0 2 23 108 129 107 129 0.96
5 25 9.6e-05 0.021 17.0 1.4 1 23 135 157 135 157 0.98
6 25 5.3e-05 0.011 17.8 0.6 1 23 163 185 163 185 0.97
7 25 0.002 0.42 12.9 2.1 1 23 191 213 191 213 0.99
8 25 9.7e-07 0.00021 23.3 1.1 1 23 219 241 219 241 0.96
9 25 0.0016 0.34 13.2 1.0 1 23 247 269 247 269 0.98
10 25 5.1e-08 1.1e-05 27.3 1.2 1 23 275 297 275 297 0.98
11 25 0.00022 0.046 15.9 0.9 1 23 303 325 303 325 0.97
12 25 1.2e-05 0.0026 19.8 3.2 1 23 331 353 331 353 0.96
13 25 2.1e-05 0.0044 19.1 0.9 1 23 358 381 358 381 0.97
14 25 0.0057 1.2 11.4 5.6 2 23 388 409 387 409 0.97
15 25 5.6e-07 0.00012 24.0 0.4 1 23 415 437 415 437 0.98
16 25 0.0077 1.7 11.0 0.6 2 23 444 465 443 465 0.95
17 25 3.2e-07 6.9e-05 24.8 0.3 1 23 471 493 471 493 0.98
18 25 0.00043 0.092 14.9 3.0 1 23 499 521 499 521 0.99
19 25 1.3e-06 0.00027 22.9 1.4 1 23 527 549 527 549 0.99
20 25 4.9e-05 0.01 17.9 2.9 1 23 557 579 557 579 0.97
21 25 0.001 0.21 13.8 0.2 1 23 585 607 585 607 0.91
22 25 4.9e-05 0.011 17.9 2.8 1 23 613 635 613 635 0.98
23 25 0.12 25 7.3 1.8 1 23 643 665 643 665 0.96
24 25 8.8e-06 0.0019 20.2 3.8 2 23 672 693 671 693 0.97
25 25 0.0037 0.8 12.0 0.0 1 23 698 720 698 720 0.96

Sequence Information

Coding Sequence
ATGAAATTCGATAGTAAACATCGCTACCGGGATCACGTGAGGAAACATGCAGCCAGAGATCCGTACAAGTGTTCTACATGTGGTGGGGAATATACAAACCAGTATCGTTTCAAGATGCACATGAGAACGCACACAACCGAGAATATTTTCTTTTGTGACGTGTGTGGCTTGAACTTTCTTACGAAAGATACGTTAAAGAAGCACATGCAATTACACTCAAAAATATCACCACGTTTTGATTGCGATATTTGCAATAAGAGCTTTTTTTACAAGAGTGTAATCGTCAAGCACATGCAGACGCACATGAATGGGAAGCCTCTCTCGTGCAAACTTTGTGGTGTCAAATTCAAGATAAGAACAAATTTGAAGAATCATATGTTGATGCACAAAAACAACGAGGTTTATTCTTGTGATGTTTGTGGTAAGAAGTGTATCACAGAGGAAAAACTGACTGATCACACTAAAGTGCACACGAGTGGAAGACCATTTGCATGCAAATTTTGCAACAAAGCGTACAGAGTTCAGGGATACTTGATCTCGCACATGAAAGAGCACATTGGCCAGAAGCTCTATACCTGCAGAATCTGTAAAAGTAGTTTTGGAAGGAAAGATGAATACGACAATCACAGGAAAATGCATCTCGGTCAGCGCCGTTTTACGTGTGACATTTGCGGCAAAACTTTCAGTGGGAAAGTTCATCTTCGCAGCCACATTACGGGACATGAAACCAAGAAGCCATTCAAATGTGATGTATGTCATAAGGGCTTTTGGACTAAACCAGGTCTAGAAATGCATACAAGGCTCCATACTGGGAAAGGTCTCTTTTCCTGCCAAGTCTGTGGCAAAAGATTCGTCCAGAGAAGCCAACTGACATCGCATATGAAGGTTCATACCGGCGAGAAGCCGTTTTCATGTGTTAGTTGTGGCATGAAGTTTGCCCAGAAAAGCGCCTTGAAGTTGCACACAACAAAACACACAAGTGTAAGACCTCATGTATGCGAGATCTGCGgcaaaaattttaaaatcaaaCATGATTTAACTAAGCATATGACCGAGCATGGaaccaataatttttcatgtgaagTATGTGGTGAAAATTTCTGTCTTAAAACCGATTTGGAGAGGCATTTGAAGGTAATACATGACGGCGCTAAACGCTTATCTTGTCAGCattgcgataaaaaattcacttttatgtGTGTCTTGAAAGATCATATGTTGACTCATACCGGCGAGAGACTTTACCCTTGCGGGGTCTGTGAAAAAAGCTTCATGAGAAAATCCACTTTGATGCTGCACATGAGGATACACCAGAGAGGTGATCCACTGTCTTGCGATATCTGTAAGAAAAATTTCGTATGCAAGGACAGTCTGGATGCCCACATGGCTGCGCACACGGGCAAAAAACTCTTCCCCTGTAAAATCTGTGGCAAGGGCTTCAGCCGAAAAAATGCTTACACAGCGCATATGGTGACTCATAGTGGCAATGAACAATATCGCTGTAAATTATGCGATAAGCGTTTCGTTTTCAAAGGCAAATTAGATTTTCACATGAGAACTCACACGGGAGAGAAATCTTTCAAATGCGAAATTTGTGGGAAAAGCTTCCTCCAGAGAGAATACTTGAGAAAGCACATGGACACGCACAAAGACTTGAATGATAGAGCTCACTCTTGTAAAGCCTGTGGCCGGCGCTTCACAGAAAAAAGGACATTGAATAAACACATGCTGATACACGAGgatgaatttccatttgaatGTGCAGACTGTGGCAAGAAATTTAGAGTTAAACAACAGCTCGTTCCTCATGTGCTGTTGCACATGGGTTTGAAGCGTTTTTCCTGTAGGGATTGTGGGAAGAGATTTATCCACAAAGGTGACCAGGAACGACATGAAAAAACGCACATAAATCCGGAACCATCGCAGTTTGAATGCAATATTTGTGGTGAGATTCGCTACTGCCGTCCAAATTTTAATACGCACATGAAATTGCACACGCGCTACGAGTCTACCAGTTGCAAAGTTTGTAAGAAATTCTTTCGAAgtgaaaaacttttgaaaagACACATGAGAAATCACACCAATAAGACTTATTCTTGCGATATCTGTAGCCAAGTATTCGTCGATAAGGGCCGACTAGTACCACATATGAATGCTCATGAAAGAAAAGAATCTCGAGCAAACCGAGGATGTAAACAATGGAATGAAtcattgaattcaaattcagaCAACTGA
Protein Sequence
MKFDSKHRYRDHVRKHAARDPYKCSTCGGEYTNQYRFKMHMRTHTTENIFFCDVCGLNFLTKDTLKKHMQLHSKISPRFDCDICNKSFFYKSVIVKHMQTHMNGKPLSCKLCGVKFKIRTNLKNHMLMHKNNEVYSCDVCGKKCITEEKLTDHTKVHTSGRPFACKFCNKAYRVQGYLISHMKEHIGQKLYTCRICKSSFGRKDEYDNHRKMHLGQRRFTCDICGKTFSGKVHLRSHITGHETKKPFKCDVCHKGFWTKPGLEMHTRLHTGKGLFSCQVCGKRFVQRSQLTSHMKVHTGEKPFSCVSCGMKFAQKSALKLHTTKHTSVRPHVCEICGKNFKIKHDLTKHMTEHGTNNFSCEVCGENFCLKTDLERHLKVIHDGAKRLSCQHCDKKFTFMCVLKDHMLTHTGERLYPCGVCEKSFMRKSTLMLHMRIHQRGDPLSCDICKKNFVCKDSLDAHMAAHTGKKLFPCKICGKGFSRKNAYTAHMVTHSGNEQYRCKLCDKRFVFKGKLDFHMRTHTGEKSFKCEICGKSFLQREYLRKHMDTHKDLNDRAHSCKACGRRFTEKRTLNKHMLIHEDEFPFECADCGKKFRVKQQLVPHVLLHMGLKRFSCRDCGKRFIHKGDQERHEKTHINPEPSQFECNICGEIRYCRPNFNTHMKLHTRYESTSCKVCKKFFRSEKLLKRHMRNHTNKTYSCDICSQVFVDKGRLVPHMNAHERKESRANRGCKQWNESLNSNSDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-