Ehay001099.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:17576992-17582157[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 9.8e-06 0.0021 20.1 1.5 1 23 235 257 235 257 0.97 2 24 0.00018 0.038 16.1 0.3 1 23 263 285 263 285 0.97 3 24 9.3e-06 0.002 20.2 0.3 1 23 292 314 292 314 0.98 4 24 3.3e-05 0.007 18.4 1.7 1 23 320 342 320 342 0.98 5 24 5.5e-06 0.0012 20.9 0.6 2 23 348 369 347 369 0.97 6 24 0.011 2.4 10.5 0.2 1 23 376 398 376 398 0.95 7 24 3.2e-05 0.0069 18.5 1.0 1 23 404 426 404 426 0.99 8 24 0.00022 0.047 15.9 2.5 1 23 432 454 432 454 0.96 9 24 8.1e-07 0.00017 23.5 2.9 1 23 460 482 460 482 0.98 10 24 1.8e-05 0.0039 19.2 1.0 1 23 488 510 488 510 0.94 11 24 0.00029 0.061 15.5 3.0 1 23 516 538 516 538 0.97 12 24 5.3e-06 0.0011 20.9 0.2 1 23 544 567 544 567 0.98 13 24 0.44 94 5.5 3.8 1 23 572 594 572 594 0.93 14 24 6.3e-07 0.00013 23.9 2.7 1 23 600 622 600 622 0.97 15 24 0.00017 0.037 16.2 0.0 1 23 628 650 628 650 0.96 16 24 6.6e-07 0.00014 23.8 0.5 1 23 656 678 656 678 0.98 17 24 1.5e-05 0.0032 19.5 1.3 3 23 686 706 684 706 0.98 18 24 2.2e-05 0.0046 19.0 0.6 1 23 712 734 712 734 0.98 19 24 0.0027 0.58 12.4 0.9 2 23 744 765 743 765 0.97 20 24 0.00012 0.025 16.7 0.1 2 23 772 794 771 794 0.93 21 24 1.8e-05 0.0038 19.3 0.2 1 23 800 822 800 822 0.95 22 24 3.5e-06 0.00075 21.5 2.0 1 23 827 849 827 849 0.96 23 24 7e-07 0.00015 23.7 0.3 2 23 856 877 855 877 0.97 24 24 8.1e-05 0.017 17.2 3.4 1 23 882 905 882 905 0.97
Sequence Information
- Coding Sequence
- ATGGTGCAACTCAAAAATGAAACTTTTCGTCTCAAATTCGAGGCTCTTAAAGATCATCAAACTAAAGACCAAGAGCACACAAAAATGAAGAAACGGAAGCAAGATTTACATATGCCACTTCATTCGATAAGGATTTCTCAATTCAGAGGGAAAAAATTTGCAGGATTACACAAAGGATCCCATTCTCTGATGGAGGCTGCAGAGCTTTTGGATCTTGAAAATGAGCAAGTCGATATCAAAGATGAAACGCTGTTGGAATATAATGATGCTCAGCAGCTCATATTGCAGCAATCAAGAATCAATATTGCGGGTTCTCGTCTCGACCATTCTGCCAAAGCTTTTGACGCAGATATGACCGATCTGGTACCAAATCGTAACCATCACGATATGACAGACGATCCGCTAGAATTCCGAGGATCGATGACAATCAAAGATGAGCCTTCGATGATTGAATATGAAGATGTTGCACAGGGTGTGGTGGATGATCAAGAGTTGAATCTGGTTGAAGTCAAGTCAGAAGATTTGACTCCGAACTCCtctggaatttcaaaaaatcatgctGGTACGCCAGTGGTTGATTACGATAACAACCAACAGCCCGAATTCCACAGGAGTTCGCAATTATACTGTAACACTCAAAAGACAAGCTTGAATCATAGTGACGGTTCTGAGGCAAACGAAAAGAGGCAGCGAAGCAATTTTCACCCTTGTTCAAAATGTGATATTGTGTTCAGCCAAAAAAGACTATTGGAAAGTCACCGAAGAATACACACAACAAAGAAAATCTTCACCTGTAACATCTGTGGCATGAATTTGGCATACAAAACTATGCTAGAAAAGCACATGGAACTTCATTCAAGAGCACTTCAGGTTTTCTCTTGTGACCTCTGTGACAAAAACTTTCCCACtaaatctgagattgaaatacATTTACGTTCACACACGATTGGTACACCGTTCTCATGCAAAATATGCGATGCCAAATTCAAAAGGGAAGATACCATGAGAAGGCATTTGAAGTTACACGATAAGGAGCCCATAGTGTGCGAAATTTGCAACCAGATTTTCAAAAGCAAGAGATCCCTGTTTGCTCACATGAACAAACACTACAGGGGCGAAGACGTTTTCTTGTGCACCGTCTGTGGTAATGCGTCGGAGAATCaagatgactttgaaaatcataaaaaaattcatgacagTGAACGCCGTTATAAGTGTGACACTTGTGGTAAAGGATATAGACAGAAGAAAATTTTACTTTCGCACATGCGTGTCCATGAAAAAGTGAAGCCATTCAAATGCAACGTGTGTGATAAGAGTTTTCATATTAGAGCAAATTTGAAATCACATTCAATGCTGCATACAGGAGAGAGACTTTTCTCCTGTAAGATTTGTAACAAAAGTTTCATCCATAAGAACAGTTTAACAGCTCACATGAATTTGCACACAGGTGAAAAGCCATACTCGTGTGATATCTGTAGCAAGGATTTCTCCGACAAGTCTCAATTGTCGAAACACTCGGTTTCTCATACACAAGAAAAACCGCACAAGTGTGATGTATGCGGTAATAGTTATCGCCACATGTCGTATCTCAGAGATCATATGATACTTCATGAAGGTACGAAAAATTATCCATGTGAGGTTTGTGATACAAAATTCAGCACAAAAGCCAGTGTTTTAGCTCACATGAGAAGAATGCATCAGGACAAGCGATTTTTGTGCAAATTTTGTGGCAAAAAATTCGAATATGACTGCATCTTGACAGAACATTTAAAAAAGCATGCTGTGGACAGACCCTTTTTCTGTGAATTTTGTGACAAGAGCTTTACTACAAAACGTTCTTTGAGAGTACACATGAAGATACATCAGAGAGACAAGATTTTTCCGTGCAATGTTTGtgacaaaaaattcatcgcaCAAGAAAGTTTAGATGCGCACATGGCTGCGCACGCGGGTAAAAGACTCTTCCCGTGTACAGAGTGTGATAAGGGCTATAATAACAAGTACGATCTCAGAGATCACATGTTGACTCACGAAGGTAAAGAGCCCTTCGGAtgtgaattttgcaaaaagcgtTTTGTCTCCAAGTACACTCTTGAACTTCATATCAGGACTCACACAGGAGACAAACCCTTTGTATGTAAAATCTGCGATAGTCGCTTTACCCAAGGAGGTGGTTTAAGAACACACATGAAGACGCACCAGAAGTCAGATGAAAGGATTTATGTACCGTGTAATGTGTGCGGAAAGCGATTGGGTTGCAAAGACTCATTGAAAATGCATATGAGaatccatactggtgagaaaccTCTTGAGTGTGCAGACTGCGGAAAGAGCTTTAGGACGAAGAACACTTTAATTCCTCACATACAATTGATGCACATGAATGAGAGGCCATTCTCATGTAGAATTTGTGGCTCAAGTTTTGGGCGTAAGTCGAATCTCGCGCAACATATGGTGGCACATGAAAAACCTAGATTTGAATGCAGTGACtgtgggaaaaaatttcctTACAAAAAGTCTTTGAAGCGTCATAAAGAACTCCATGAGCGTTTCAGATCTACTACTTGCAAAATCTGTGGACGAGCTTTTCCAGACAAAGATTATCTGGAAAAACATATTAAATTGCATAGTGGTCAGATTTTTCCATGCAACTATTGCgacaagaaatttttcacaacAGGAGGGTTCAGACGGCATTTAAAAAAGAAGCATGGAGATGAGAAACCTATGTCATCCGATGACTCGGGTGACGAAACTAGCTGA
- Protein Sequence
- MVQLKNETFRLKFEALKDHQTKDQEHTKMKKRKQDLHMPLHSIRISQFRGKKFAGLHKGSHSLMEAAELLDLENEQVDIKDETLLEYNDAQQLILQQSRINIAGSRLDHSAKAFDADMTDLVPNRNHHDMTDDPLEFRGSMTIKDEPSMIEYEDVAQGVVDDQELNLVEVKSEDLTPNSSGISKNHAGTPVVDYDNNQQPEFHRSSQLYCNTQKTSLNHSDGSEANEKRQRSNFHPCSKCDIVFSQKRLLESHRRIHTTKKIFTCNICGMNLAYKTMLEKHMELHSRALQVFSCDLCDKNFPTKSEIEIHLRSHTIGTPFSCKICDAKFKREDTMRRHLKLHDKEPIVCEICNQIFKSKRSLFAHMNKHYRGEDVFLCTVCGNASENQDDFENHKKIHDSERRYKCDTCGKGYRQKKILLSHMRVHEKVKPFKCNVCDKSFHIRANLKSHSMLHTGERLFSCKICNKSFIHKNSLTAHMNLHTGEKPYSCDICSKDFSDKSQLSKHSVSHTQEKPHKCDVCGNSYRHMSYLRDHMILHEGTKNYPCEVCDTKFSTKASVLAHMRRMHQDKRFLCKFCGKKFEYDCILTEHLKKHAVDRPFFCEFCDKSFTTKRSLRVHMKIHQRDKIFPCNVCDKKFIAQESLDAHMAAHAGKRLFPCTECDKGYNNKYDLRDHMLTHEGKEPFGCEFCKKRFVSKYTLELHIRTHTGDKPFVCKICDSRFTQGGGLRTHMKTHQKSDERIYVPCNVCGKRLGCKDSLKMHMRIHTGEKPLECADCGKSFRTKNTLIPHIQLMHMNERPFSCRICGSSFGRKSNLAQHMVAHEKPRFECSDCGKKFPYKKSLKRHKELHERFRSTTCKICGRAFPDKDYLEKHIKLHSGQIFPCNYCDKKFFTTGGFRRHLKKKHGDEKPMSSDDSGDETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -