Basic Information

Insect: Eretmocerus hayati
Gene Symbol: -
Assembly: GCA_029851415.1
Location: CM056741.1:17399645-17402614[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.9e-06 0.0004 22.4 1.4 1 23 9 31 9 31 0.98

2 28 0.00013 0.028 16.5 1.4 1 23 36 58 36 58 0.96

3 28 7.6e-07 0.00016 23.6 2.4 2 23 66 87 65 87 0.97

4 28 0.0004 0.087 15.0 0.8 1 23 93 115 93 115 0.98

5 28 0.00018 0.039 16.1 2.7 2 23 121 142 120 142 0.96

6 28 0.0002 0.044 15.9 0.3 2 23 150 172 149 172 0.96

7 28 1.1e-06 0.00024 23.0 2.7 1 23 178 200 178 200 0.98

8 28 5.7e-06 0.0012 20.8 1.5 1 23 206 228 206 228 0.96

9 28 4.8e-07 0.0001 24.2 3.6 3 23 236 256 235 256 0.98

10 28 1.3e-05 0.0028 19.7 1.5 1 23 262 284 262 284 0.98

11 28 5.4e-07 0.00012 24.1 1.9 1 23 290 312 290 312 0.97

12 28 3.3e-06 0.00071 21.6 0.6 2 23 321 342 320 342 0.96

13 28 3.3e-05 0.0071 18.4 0.4 2 20 349 367 348 369 0.93

14 28 4.3e-05 0.0093 18.1 0.5 2 23 377 398 377 398 0.98

15 28 1.3e-05 0.0027 19.7 1.2 1 23 405 427 405 427 0.98

16 28 0.0042 0.91 11.8 1.0 1 23 433 455 433 455 0.97

17 28 0.00088 0.19 14.0 1.1 3 23 462 482 461 482 0.98

18 28 0.061 13 8.2 0.1 3 23 491 511 490 511 0.97

19 28 5.3e-07 0.00011 24.1 0.6 1 23 537 559 537 559 0.98

20 28 0.00014 0.031 16.4 0.7 2 23 566 587 565 587 0.96

21 28 1.5e-05 0.0032 19.5 0.4 1 23 593 615 593 615 0.98

22 28 0.001 0.22 13.7 0.4 1 23 621 643 621 643 0.98

23 28 0.00018 0.039 16.1 1.9 1 23 649 671 649 671 0.97

24 28 8.2e-06 0.0018 20.3 1.1 2 23 681 702 680 702 0.97

25 28 0.00012 0.025 16.7 0.3 1 23 708 731 708 731 0.94

26 28 0.00017 0.037 16.2 0.1 1 23 737 759 737 759 0.98

27 28 0.013 2.8 10.2 0.7 2 23 762 783 761 783 0.94

28 28 7.4e-05 0.016 17.3 2.6 2 23 790 811 789 812 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.9e-06	0.0004	22.4	1.4	1	23	9	31	9	31	0.98
2	28	0.00013	0.028	16.5	1.4	1	23	36	58	36	58	0.96
3	28	7.6e-07	0.00016	23.6	2.4	2	23	66	87	65	87	0.97
4	28	0.0004	0.087	15.0	0.8	1	23	93	115	93	115	0.98
5	28	0.00018	0.039	16.1	2.7	2	23	121	142	120	142	0.96
6	28	0.0002	0.044	15.9	0.3	2	23	150	172	149	172	0.96
7	28	1.1e-06	0.00024	23.0	2.7	1	23	178	200	178	200	0.98
8	28	5.7e-06	0.0012	20.8	1.5	1	23	206	228	206	228	0.96
9	28	4.8e-07	0.0001	24.2	3.6	3	23	236	256	235	256	0.98
10	28	1.3e-05	0.0028	19.7	1.5	1	23	262	284	262	284	0.98
11	28	5.4e-07	0.00012	24.1	1.9	1	23	290	312	290	312	0.97
12	28	3.3e-06	0.00071	21.6	0.6	2	23	321	342	320	342	0.96
13	28	3.3e-05	0.0071	18.4	0.4	2	20	349	367	348	369	0.93
14	28	4.3e-05	0.0093	18.1	0.5	2	23	377	398	377	398	0.98
15	28	1.3e-05	0.0027	19.7	1.2	1	23	405	427	405	427	0.98
16	28	0.0042	0.91	11.8	1.0	1	23	433	455	433	455	0.97
17	28	0.00088	0.19	14.0	1.1	3	23	462	482	461	482	0.98
18	28	0.061	13	8.2	0.1	3	23	491	511	490	511	0.97
19	28	5.3e-07	0.00011	24.1	0.6	1	23	537	559	537	559	0.98
20	28	0.00014	0.031	16.4	0.7	2	23	566	587	565	587	0.96
21	28	1.5e-05	0.0032	19.5	0.4	1	23	593	615	593	615	0.98
22	28	0.001	0.22	13.7	0.4	1	23	621	643	621	643	0.98
23	28	0.00018	0.039	16.1	1.9	1	23	649	671	649	671	0.97
24	28	8.2e-06	0.0018	20.3	1.1	2	23	681	702	680	702	0.97
25	28	0.00012	0.025	16.7	0.3	1	23	708	731	708	731	0.94
26	28	0.00017	0.037	16.2	0.1	1	23	737	759	737	759	0.98
27	28	0.013	2.8	10.2	0.7	2	23	762	783	761	783	0.94
28	28	7.4e-05	0.016	17.3	2.6	2	23	790	811	789	812	0.94

Sequence Information

Coding Sequence: ATGCATAATGCAGCCCAGGACCCGTTCACGTGTTCAACATGTGGAGAAAACTACAGCAGGAAAGAAGATTTGAAGAATCACTTGAAAATGCACGAGGCGAAGGTCTTCACCTGCGATATTTGTGGTGTAAACTGTGTGCGAAAAGGACATCTGGCCAGACACGTAAGTCTTCATTCCAGGACACCAAGACAATTATATTGCGATATCTGCGACAAAAGCTTCAGATACAAGTCCAATCTTGTTCAACATCTGCATACCCATACAGTTGACAAACTCTTCTCATGCAAGATTTGCGATGCTAAACTCAAGACCGAAGCCTCGATGAAATCCCACATGAAGTCCCATACCAGAAAACCTATATCGTGCAAAGATTGCCATCAGACATTCAAAAGCGAGAGATCCTTGTTTGCACACGTGAAACAACATTACAAGGGTGAAGAGTTATTGTCTTGCGAGgtctgtggaaaattttttgagatcagAATCGAATTTGAGAAGCACATGAAGAAAGCACATCAAACTGAACGGCATCACAAATGCGATGCTTGCGGCAAAGCTTTTGGTACGAAATCGCGTTTGCGCAAACACATGCGTACACATGAAAATCTGAAACCATTCAAGTGCGATGTCTGTGGCAAGGACTTCCGTTACCGGGGAAACCTGAAAACGCATTCAATGCAACATACTGGAAAGTGGCCAGTCTTCTGTAAGATTTGCGATAAAGGCTTTCCACATAGTGATCACTTGGCGAGACATATGAGGACGCATACTGGCGAAAAACCGTATGCATGCGAGATGTGTAGTAAGAAATTTGGCCGCAAGTACACTCTTCTGATGCACTTAAGAACACATACGGGTGAAAGGCTGCATCCGTGTCAAATTTGTGGAAAAGAGTTTTCTATCCGATCAAATATGCGGAAGCATATGCGTATGCACGAGAGAGACAAGCATCCATGTATACCATGCAGTGagtgtgatgaaaaattttctaataagAAAACCCTCCGATCGCACATGGTTACCCATCGGTCTGAGAAACTTATTCCGTGTAAACACTGCGACAAGAGTTTTAAAGTTAAGGACGCTCTCAATGATCACATATTTAGTCGACAGTGTGAAGGACTCCCTCGTTGTGATATTTGTGGTCGAAGTTTTTTGAGCAAGATTCTCTTAGAAAGACACATGATGCGGCACTCGGAAGCACCTCGGCTTTTTTATTGCGATATCTGCGATAAATGTGTCTCCACCAAGAGTGAGATTGAAATACATCTACGTTCGCACACAACTGAGAAACCGTTTTCATGCAAAATCTGCGATGCCAAGTTCAAAAGGGAAGTTATTATGAAACGACATCTGAAGTTGCACGACAAGAAGCCCATATTGTGCGAAGTTTGCAACCAATCATTCAAAAGTAAGAGAATCCTGTTTGCTCACATGAACAAGCACTACATAGGTGAAGAAATCTCTTTGTGCGTTATCTGTGGTGATGTGTTGCAGAGTAAGGATGAACTCGAAAATCATAGAAAAATGCATGACTTGGAGCGGCATTACAAATGTGACACTTGTGAGCTAAAACAACATCTAGAAGTACATCAGGGTGAACGTCCTTACGCATGTGAAAACTGTGGAAAGAGATTCTCTGGTCGTAAAGGTCTGAAGCAACATATGCGAGTACATGATAAGGACAGCCTCTTACCATGCAGTGTGTGTGACAAAAAGTTCAGTACAAAAGAAATTTTGCACGCGCACATGATTTCGCACACGGGAAGCAAACTATTTCCCTGCAAAAAATGTCCTAAAGGTTATGCTAACAAATTcggtctcaaaattcacatgcTAAGCCACGAGGGTAAAGAACCTTACCATTGTGACGTTTGTGACAAGCGTTTTGTCTCAGAAAACATTCTGGGGGTTCACATGAGGATTCACACAGGAGATAAGCCCTTCGCGTGTGAAATCTGCCACAGTCGCTTTACCCAGGGTAGTACTTTAAGAGGACACATGAAGACGCACCAGAAAGCAGACGAAAAGGCCTATGTAACGTGCAAAGTGTGCGGAAAGCGTTTGGGTAGcaaattctcattgaaaaaGCACATGAGAATCCACACAGACGAGAAACCTTTCCAATGTGCAGACTGCGGAAGAAGCTTCAGAATGAAGAACAATCTAATTCCTCATTTACAATTGATGCACGTGGATGAGAAGCCATTCTCTTGTGAACTATGCGGCTCAAGTTTTGGCCTCGCAAAGAATCTCAAGCAGCACATGGCGGTACACCAAAAAACGTGTAATACGTGCGGCGCAAAAGTAGGTTCCAAGAAATCTCTGAAACGCCATGAAGAACTACACGAACGCTACAAATCCACGTCGTGCAAAATCTGCAGGCGATCTTTCATAGACCAAGACCGCTTGAATCAACATATGAAGGGGCATCATGAGTAG
Protein Sequence: MHNAAQDPFTCSTCGENYSRKEDLKNHLKMHEAKVFTCDICGVNCVRKGHLARHVSLHSRTPRQLYCDICDKSFRYKSNLVQHLHTHTVDKLFSCKICDAKLKTEASMKSHMKSHTRKPISCKDCHQTFKSERSLFAHVKQHYKGEELLSCEVCGKFFEIRIEFEKHMKKAHQTERHHKCDACGKAFGTKSRLRKHMRTHENLKPFKCDVCGKDFRYRGNLKTHSMQHTGKWPVFCKICDKGFPHSDHLARHMRTHTGEKPYACEMCSKKFGRKYTLLMHLRTHTGERLHPCQICGKEFSIRSNMRKHMRMHERDKHPCIPCSECDEKFSNKKTLRSHMVTHRSEKLIPCKHCDKSFKVKDALNDHIFSRQCEGLPRCDICGRSFLSKILLERHMMRHSEAPRLFYCDICDKCVSTKSEIEIHLRSHTTEKPFSCKICDAKFKREVIMKRHLKLHDKKPILCEVCNQSFKSKRILFAHMNKHYIGEEISLCVICGDVLQSKDELENHRKMHDLERHYKCDTCELKQHLEVHQGERPYACENCGKRFSGRKGLKQHMRVHDKDSLLPCSVCDKKFSTKEILHAHMISHTGSKLFPCKKCPKGYANKFGLKIHMLSHEGKEPYHCDVCDKRFVSENILGVHMRIHTGDKPFACEICHSRFTQGSTLRGHMKTHQKADEKAYVTCKVCGKRLGSKFSLKKHMRIHTDEKPFQCADCGRSFRMKNNLIPHLQLMHVDEKPFSCELCGSSFGLAKNLKQHMAVHQKTCNTCGAKVGSKKSLKRHEELHERYKSTSCKICRRSFIDQDRLNQHMKGHHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -