Ehay018832.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- zfh1
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:38957199-38963276[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.97 2.1e+02 4.4 0.0 9 23 72 86 71 86 0.95 2 37 2.6e-06 0.00057 21.9 2.5 1 23 92 114 92 114 0.98 3 37 0.00098 0.21 13.8 0.6 1 23 120 142 120 142 0.98 4 37 7.1e-06 0.0015 20.5 1.9 1 23 157 179 157 179 0.98 5 37 3.6e-05 0.0077 18.3 3.2 1 23 185 207 185 208 0.95 6 37 0.0084 1.8 10.9 0.1 5 23 217 236 216 236 0.96 7 37 4.9e-05 0.011 17.9 5.5 1 23 242 264 242 264 0.98 8 37 3.4e-05 0.0074 18.4 1.1 1 23 270 292 270 292 0.96 9 37 2.6e-05 0.0055 18.8 0.9 2 23 298 319 297 319 0.95 10 37 0.00016 0.034 16.3 0.8 1 23 325 347 325 347 0.98 11 37 0.00016 0.035 16.2 2.6 1 23 353 375 353 375 0.98 12 37 3e-06 0.00065 21.7 2.9 2 23 382 403 381 403 0.96 13 37 0.00027 0.057 15.6 0.6 2 23 412 433 411 433 0.97 14 37 0.00065 0.14 14.4 1.2 1 23 439 461 439 461 0.99 15 37 0.0002 0.043 16.0 3.5 1 23 467 489 467 489 0.95 16 37 2.6e-05 0.0055 18.8 2.1 1 23 496 518 496 518 0.98 17 37 0.0028 0.61 12.4 2.0 2 23 525 546 524 546 0.96 18 37 0.0007 0.15 14.3 1.4 1 23 551 573 551 573 0.98 19 37 1.2e-05 0.0025 19.9 5.7 1 23 629 651 629 651 0.98 20 37 1.6e-05 0.0034 19.5 0.8 3 23 687 707 686 707 0.98 21 37 6.1e-05 0.013 17.6 0.9 1 23 725 747 725 747 0.98 22 37 0.0062 1.3 11.3 0.0 2 23 754 775 753 775 0.97 23 37 3.6e-05 0.0078 18.3 0.5 1 23 782 804 782 804 0.98 24 37 0.00023 0.049 15.8 1.0 1 23 810 833 810 833 0.96 25 37 0.00018 0.038 16.1 1.7 1 23 839 862 839 862 0.94 26 37 0.00019 0.041 16.1 1.7 1 23 898 920 898 920 0.98 27 37 0.0038 0.82 11.9 2.2 2 23 927 948 926 948 0.97 28 37 0.00029 0.063 15.5 0.1 1 23 951 973 951 973 0.98 29 37 2.7e-05 0.0057 18.7 1.2 1 23 979 1001 979 1001 0.98 30 37 0.012 2.6 10.4 8.6 1 23 1007 1029 1007 1029 0.96 31 37 4.6e-08 9.8e-06 27.4 0.2 1 23 1035 1057 1035 1057 0.98 32 37 0.0027 0.58 12.4 0.8 2 23 1064 1085 1063 1085 0.97 33 37 0.00063 0.13 14.4 0.1 1 23 1091 1113 1091 1113 0.98 34 37 6.8e-05 0.015 17.5 0.3 1 23 1119 1141 1119 1141 0.95 35 37 8 1.7e+03 1.5 0.8 2 20 1149 1168 1148 1170 0.76 36 37 0.0016 0.34 13.2 0.9 2 23 1174 1195 1173 1195 0.96 37 37 0.00027 0.059 15.5 2.5 2 23 1201 1222 1200 1223 0.94
Sequence Information
- Coding Sequence
- ATGCAGACTCAGAACGTGCTAACAAATTTCCGAGACGAGAAAGCACTCGAAGGTGTTTTGGACCAGAAATTGAAAGTTGTGTTGGTTCCGTGTGATTCGCCACTATTTAAAAATGAGATTGGAAGTAAAATTGACATACACAAAGGCGACAAggcaaaaaatttggagaagcACACGGATCATCAGCTTCTGCCATATACGAGATCTGGGGACGTCTTTGAAACTAAGGATGAGATTGAGAAACACCAGAAAACTCACAGGAGACAGTATTCATTCGTTTGTGACATTTGTGGTAAAGACTTCTGTCGAAGAGCTCATCTCCGATTGCACTTGGCGACGCATGAAAACATAAAACCATTCAAGTGTGAGGCATGTAACAAAGGATTCCTTAGTAAAGGAGCTCTAAGAACGCACATGAAGCTGCATACAGGAGAAGCACACATGAGAGTGCACACAGGTGAAAAGCCTTTTGAGTGCAAAATATGCAACAAAAACTTCACACAAGAATCGTATCTTCGATTACATTCAATGACGCACACTGGCGAGAAACCACATTCCTGCGAGGTTTGCGGAAAGAGATTTGGACAGAAAGGCCAATTGAATATGCACTATATGAGTCATCATGACAAGATAAGCTTCCCTCGCAGTCAATGCGATGAGGTTTTCGATATAAACTCCAAATTAGAAGTGCACATGAAGACAAAACATGAAAAGAAAGAACGCTTCCCGTGCAAGCATTGCAACAAGGATTTCAAACACCCATACTTGTTGAGGGAGCACACAAAAATGCACACAGGCGAGAAACCTTACTTGTGTGACATATGTGGCAAGAGatttgcaatgaaatatcacaTCTACATACACATGAGAGTACATAACAGAGTAGCAGTCACATGTCATATATGCAACAAAAAGTTCGccagtgaaaaaaatctgaaaggaCACATGGCTGCGCACACTGGCAAAAAGTTATTCACTTGCATGGATTGTGGCAAGGGTTTCAGCTTCAAAGTACCATTTAAACAGCACTTACTCATGCACCAGGGTAAGCAACCATATAAATGCAATCTTTGTGATAAGTACTTTAGTCGTAAGCAAGGATTGGAGTACCACTCAACAACCCATACCGGAGAAAGGCCATTGACTTGCACAACTTGTGGAAAAACCTTTTCTCACCGAATAACCTTGAAAAAACACATGGAAATACACCAAAAACCAGAAGAGAGAGCAATACCTTGCAACGTATGTGGAAAGCATTTGGCAGGTAAAAGAAACTTGGATAAGCACATGAGTACCCATGCCATCGAAAGACCTTTCCAGTGCGCACATTGTGATCAGGGCTCCAACTCGAAAAAAGGACTGATCAATCATCTACAAACTCATGctgacgaaaaatttttctcatgcaAAACTTGTGGCTCAACCTTTTCCAGCAAGGAACACCTCAAGACGCATAAAGTTATACATGTGAATGATGAGCCTCTTTTCAAATGTAGTATTTGCAACAAAGGTGCGAGTTCCAAACACCTCCTGGAAAGACACATGAAATTGCACATCCGCTATAAATCTACGAGTTGTCACATCTGTGGGATACCTTGTCGCAACCAGGAAGTCTTAAGTAAACATTTGAACTTGCACACGGGCAATGTTTTCTCTTGTGACATCTGCAACAAGAAATTTTTAAACAAGTATGGCATAAGACAACACATCAGATCGCATTTCCCCACAGAGTCTTCACCATCTCAAAATGACGTAGCCAGGAAGAAAAGTCAATCCAGCGACAATACACAAGTATCTAGATCCGATCCAGCTTCATTGTCAGTTTCCGATCTTGGCCCTCAACCACGAGATGAACAGTCGTCAGACTTTACTAGTTGTTTGCAGTACGACTGCACTGtttgtaagaaaaaatttcatcgaaaggCATATCTCCAGAAGCACATGAAAACGCATTTACCCAAGCAGACAAGATCTTGCTCAACTTTCGGTAACCAGTTTGAGGATAAGATTCGTttggaggaacatggaacaGTCCATAATACAAAAGAGCCTGTATTTTGTGACATCTGTGGCATGAAATTTGCGACGAAGGATGCCCTAGCTCATCATATAAAAAGACATTCAGCATCGTTCCAGGAGTCTCAGATGGCGGTTGATGGGAGCCTGCGCGGTTACGAATGTGACATGTGCAATAAGATTTTCACACTCAAAAATACATTGAGATCTCACTTGGAATCACATCAGACTGAGGGGCTGTCTTCGTGTGCAATTTGCGACAAAGGACTGAGGAGTGAGGAAGCTCTGGGAGAGCACATGAAGATGCACGATGAAGAGAAGAAACTGTTCTATTGCAAAACGTGTGGCAGAGGCTTTATTGACGAGAAGCAGTTTACGATCCACATGGAGATTCACACAAGCGAGAAACCATTCCCATGTCATATTTGTGGCACAAAATTGAGCACTAAATTGAGTTTGCAATTGCACATAAGGGATACTCACGTCAGTGACAAGATGTTTCCATGCGAGATTTGcgggaaaatttttaaatacAAACGTACGTATTCTAGACATAGTCTCAAGCAACATAATATAACAAAAGGTTCTCTCCCCGGGCAACAGTACAAAAACACAGACTCCCAATCTGAATCAGAATTTCATCACAAGAAAGAAGTTGAAAGTACGGATCTGTGTTATTCCTGTAAGCTTTGCAACCAGAAATTCAGATACCCACAAATGCTGGAGGAACATACAAAAATGCATAACAACGAAGAGCTTCTAACGTGCCAAATTTGCGACAAGAAAATATCAGTGACATCAAGTATGTATCATCACATGAGATCACACAAAAAGTTTCCCTGCCCCGTATGTGACTTGAAACTTTACACTCAAAGTAGTCTCGACGATCACATGGCCACGCACACAGGCCAGGAAATTTTTTCGTGTAAGGTTTGCAGCAAAGACTTCGTTCAGAAATCTTTACTCAAAGAACACACATTAATGCACAAAGCCGAAAAGTCACATTGTTGTCACATCTGTGATAGGACTTTCAGTGACAAGCGACGGTTTGAGGATCATTTATTCACTCATAGCGGGGAGAAACCCTTCGTTTGCAACATTTGCGGCAAGGCCTTCCCTCAAGAAAAAAGCCTAAAAGCACACATGAAAACGCACACGGACAACAGGGCCGTATCTTGCGATGTTTGCGGAACGCGTTTGAAGAACAAACGAAGTTTTGGTGAGCACATGAAAAGACACGCTCCCGAGAAACCATATAACTGTGCTGACTGTGGTAAAGGCTTTGTCATCAAGGGTCGTTTGATCGAACATACTCGGATTCACACAGGCGAGGAACCTTTTTTGTGTGGAATTTGTGGATTAACGTTCAGGGGTAAGGATTTACTCCGAGCTCATTCTCGCAGACATGCAAAAGACAGACCCACGACAGTATGTGAAATCTGCGGAATCAAATGTTTTGACATAGTCGGGCACATGCAGTTGCACGAACGGCACAAGTCTACGACCTGTCAAATCTGCGGAAAGCCATGTACCACTGATGAACGTTTGGAAACCCATATGGAGTTACACACCAGTAGAGCTCTTTCATGCAAGTTTTGCGATAAAAAGTATGTCACAACGACTGCATTGAGAGTCCACATCAGGAATCATCATCCTGAGATGTCCGCGGTTTCTAAAATTGTCAGGTTCAAAAAGAAAAGGCAACGTACGGAGTAA
- Protein Sequence
- MQTQNVLTNFRDEKALEGVLDQKLKVVLVPCDSPLFKNEIGSKIDIHKGDKAKNLEKHTDHQLLPYTRSGDVFETKDEIEKHQKTHRRQYSFVCDICGKDFCRRAHLRLHLATHENIKPFKCEACNKGFLSKGALRTHMKLHTGEAHMRVHTGEKPFECKICNKNFTQESYLRLHSMTHTGEKPHSCEVCGKRFGQKGQLNMHYMSHHDKISFPRSQCDEVFDINSKLEVHMKTKHEKKERFPCKHCNKDFKHPYLLREHTKMHTGEKPYLCDICGKRFAMKYHIYIHMRVHNRVAVTCHICNKKFASEKNLKGHMAAHTGKKLFTCMDCGKGFSFKVPFKQHLLMHQGKQPYKCNLCDKYFSRKQGLEYHSTTHTGERPLTCTTCGKTFSHRITLKKHMEIHQKPEERAIPCNVCGKHLAGKRNLDKHMSTHAIERPFQCAHCDQGSNSKKGLINHLQTHADEKFFSCKTCGSTFSSKEHLKTHKVIHVNDEPLFKCSICNKGASSKHLLERHMKLHIRYKSTSCHICGIPCRNQEVLSKHLNLHTGNVFSCDICNKKFLNKYGIRQHIRSHFPTESSPSQNDVARKKSQSSDNTQVSRSDPASLSVSDLGPQPRDEQSSDFTSCLQYDCTVCKKKFHRKAYLQKHMKTHLPKQTRSCSTFGNQFEDKIRLEEHGTVHNTKEPVFCDICGMKFATKDALAHHIKRHSASFQESQMAVDGSLRGYECDMCNKIFTLKNTLRSHLESHQTEGLSSCAICDKGLRSEEALGEHMKMHDEEKKLFYCKTCGRGFIDEKQFTIHMEIHTSEKPFPCHICGTKLSTKLSLQLHIRDTHVSDKMFPCEICGKIFKYKRTYSRHSLKQHNITKGSLPGQQYKNTDSQSESEFHHKKEVESTDLCYSCKLCNQKFRYPQMLEEHTKMHNNEELLTCQICDKKISVTSSMYHHMRSHKKFPCPVCDLKLYTQSSLDDHMATHTGQEIFSCKVCSKDFVQKSLLKEHTLMHKAEKSHCCHICDRTFSDKRRFEDHLFTHSGEKPFVCNICGKAFPQEKSLKAHMKTHTDNRAVSCDVCGTRLKNKRSFGEHMKRHAPEKPYNCADCGKGFVIKGRLIEHTRIHTGEEPFLCGICGLTFRGKDLLRAHSRRHAKDRPTTVCEICGIKCFDIVGHMQLHERHKSTTCQICGKPCTTDERLETHMELHTSRALSCKFCDKKYVTTTALRVHIRNHHPEMSAVSKIVRFKKKRQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -