Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_029851415.1
Location
CM056743.1:43329615-43338674[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.36 2.2e+04 -3.2 0.1 77 99 184 205 151 229 0.42
2 6 1.5e-33 9.5e-29 102.6 0.6 1 104 484 588 484 604 0.79
3 6 3.9e-68 2.4e-63 215.7 6.6 88 218 652 782 620 782 0.88
4 6 0.0071 4.4e+02 2.4 2.7 37 67 801 831 789 856 0.69
5 6 0.18 1.1e+04 -2.3 4.2 48 74 965 991 921 1024 0.53
6 6 0.18 1.1e+04 -2.2 2.1 54 73 1042 1061 1027 1099 0.48

Sequence Information

Coding Sequence
ATGGAGTCACCCTTGGCCCAGCCGCTATCCGCGGGGGTTCAAGAGGATTCCAGCCCAATTGAATGTCCAATAAAAGAGGCAGAAACAATAGAAGATACGGCAGTACGGGACATCAGTTTCACGGATTCCAACAATGTCACAGAAACATGCTCACCCAATGAGAAGGAAAAGTTAGCGATGCCAGCATCGCCATTGTTGGCCCGAAGTCGTCCAGATCAAAATTCTGTCGAAGAAAAAGAAACCATGGGTAGTTACGTGTCTAAAAGTTTTTCAGATGAAGAACACAGCAGATCGGATGATTGCCGAGGTACTGAATTGCCGCAGGATCCAGCCTGTCCAGCTCAACCAATAGGTGCCAGCAGTCCAAACTCGCTCACAAACAGTGACAGCCCGGGTACAACACCCGGTAGGCGGAAAGCTACCACAGACTTTGAACCCGTTGGTGCTGAGGTGTCGTTCGAAAAGGCCCAGCAGCTGAAGAACGACGTGAGGCGTCTGTCTCCGGTGCACGTTAGTCAACGCGAACGGACCCTCGGTGAAATCTCGCTCACGAGCGTCGAGAAGCCACAATCCCAGGTCGACGATGTTGACAAGGAAGTCCAAGACTGCAGTGCTAGTGCGAGTGGTGCGAACTCTAGTGCCGATGCGAACTTTCGTCGCGAGCTCGTGATCCGTCTATCTCGAGTTGACGGTAGGGCACGCGATTCCCCTCCAACCACATcagaacagcagcagcaacaaagAATTACGGGCAGTGGTAGCCCATGCCCATTTGGTACGAATCTAGTGCTAGAGCGATGTACCGAACCTGGATACGTAGAGAATCGGGTACTTTCGAGCTGCGGTCGGACCTCAAGTCTGCCAAGCTCGCAGGCAATTGTAGAAAAACTGAGGATTGGTGATgaggttgaattttcaagtccTGTAAAGGCCGAGGATCCGGCTGTCAGTGCGGCAACTAGGCTGCGATCGCCACCCCCAAGATTTAATTCGCGTGCCCTGGATGAAGCCGCTGGCACAACCGGAGCTGTTGgtacgacgacgatgacgacggaTCCATTTGGTATTGCGGACGATTCGGCAGAAAGTCTTACCCTGGGGGTGACGGGATCCCCAGCCAGAGATGAAGTGCGCTCCGATGGAAGCGATTCTGGCCTAGGTAGCGAGATGCCTGGAGATGGGGTGTGTCCAGTTCCTGGAGCAACGGAAAGCGATTCCGAGACATGCTTCCTCGACAGGATACCCGATGATATCCTCATTTCTGACAAGGACAAGGCTGAAAGTCAAATAGATGGTCTTGCGACAGACGTGCCGAAGGCGCCATCCTTACTGCCAAGTTTACGTACCCCAATAAAAAGTAGCCTAAAGCGACGGCTCGCCACAGACTGCCTAGACGATGTCGACGATCAGCCTGGTGCGAAAAAGCTGAACGCAGACGAAGAATCGTCCAAAAAGAGACGCAACATACAATTTGACGCGGTTACGGTCTACTACTTCCCCAGGGCTCAAGGCTTCACCTGCGTGCCTTCACAGGGTGGCAGCACGCTGGGAATGAGCGCGACTCATACTCACGCCGAGCGTTTTTCGCTGTCTGAGCACGCTGCCGAACAGCGCAGGCTTCACAGGGCCCGCCTGGCCCAGCTGCGCTCCGAGCGAGCCGAAAATGCGCTCAAGGCCGCGATGGCAGCGAGCAGTGCCAGCCAGCAACTTCAACTTGGAGCCTCTCCAACTCCAACAGCTCAATCACAGCAGCATCAAGACGATGGCGAAACCGAAACTCCTGCCGTAACCTCAGCCGAAGAAGTCACCGCAACAGCTGGCGCCGACGATGGTAGCATAGAGGCTTCAGCTGAAGTTGAAGAGGGACAGCTAGACGTATCGGCTGCTCTTCAGAGTATGAGTTGTGCCGTTGGTGAGGTCGGAATTGGCGAGGGTTCGTCGTCGGAGGAGCCGAGCGACGATACGGATGACGACGATGAGGATCCGAGCGATGAGGGTGACGAACTCGACATCGATAGCTATTATTTTCTGCAACCAGTGCCAACGTGGCAGAGGCGAGCTCTGCTTAGGGCGGCCGGGGTGCGACGCATAGATACCCTAGAGAAGGATGAATGCAGGAATATCAGGGCGTCCCGAGAGCACTGTGGATGTTCCTGCAAAGGATACTGCGATCCTGAAAGCTGCCCGTGCAGCCGGGCCAACGTCAAGTGCCAGGTTGACAGGGCAGGTTTCCCGTGTGGTTGCTCGCGCGATGGCTGCGCCAATATTTCGGGCCGCATCGAGTTCAACCCCGTTCGCGTACGCACACATTTTATCCACACACTAATGCGGCTAGAGTTAGAGAAAAAGCCCATGCATCTAACTAGTCGCGGTGACGAAGACCAGCACCATCTCCAgcaccatcatcaccatcagCAACATCAATTTCAATTACACCAACATcaccaacagcagcaacagAGGCAGCTGCAACAAATGCACGGATCGAACTCGACGAGCGACTGTCTTGGTGCGGGCTTTACGGGTCTACATTACGGTGACACTGGTCACGACAATGGCTCGCGACCAGAAAGCCTTGACCTTTATTCCTTGAGAGATGACTGCTATCCTAACGAAGACTGCCTTGGCGACGGACACTCGCCAGCCTCGCGTAAAATGCCACACAATTTCGGGCAGAACTTTCAGCAATATGAGGGCCAAGGCCCTAACAACTCCAACACCGGGAGTTCTGGTTCCTTTCAGAACCCTTACGCCGATTACCAGAGCTACCAGAACCTGCCGTCAACCTCCAGATCGCCCTTTCAGTCGCAGTTTCAGTCGGGCTCGTCGAATCCCGGCTTCTCCATGTATAATTCCTACGGTCAGGACTCGAGCTCAATCTCGAACTCCCACCAGACTCACTCGCTCAtccagcagcaacagcagcaaaatcagcagcagcagcaagcgCAAGAGCAGCACAACAACCTTATCTATGATGCGCCCTTCACCCAAGACGAAATAACTGGTTCGCAATACACGAATCTAAGCACAATGAGCTCGTGCAGCAAACTCGAATCATTCTCCGATTTGCTCTCGGGTAGATATTCGTATTTCGGTGATATGGTGGATCAACAAcaaccacaacaacaacaacaacaaccacaacaacaacaacagcaacaacatcaACACCAACCGTCTCACGATAGTTCTTACATTGCTAATGGAATGAAAATTGCTTTGGATAAGGCAGGTATGAATGGTGCGGGTCAGCCAGAGCAGCTCGACGAGGAGGGTTGCGACGAAAACTTTGGCGAAATTATTAAGAAATCTATGGTAGAGACAGTGTCCGCATAG
Protein Sequence
MESPLAQPLSAGVQEDSSPIECPIKEAETIEDTAVRDISFTDSNNVTETCSPNEKEKLAMPASPLLARSRPDQNSVEEKETMGSYVSKSFSDEEHSRSDDCRGTELPQDPACPAQPIGASSPNSLTNSDSPGTTPGRRKATTDFEPVGAEVSFEKAQQLKNDVRRLSPVHVSQRERTLGEISLTSVEKPQSQVDDVDKEVQDCSASASGANSSADANFRRELVIRLSRVDGRARDSPPTTSEQQQQQRITGSGSPCPFGTNLVLERCTEPGYVENRVLSSCGRTSSLPSSQAIVEKLRIGDEVEFSSPVKAEDPAVSAATRLRSPPPRFNSRALDEAAGTTGAVGTTTMTTDPFGIADDSAESLTLGVTGSPARDEVRSDGSDSGLGSEMPGDGVCPVPGATESDSETCFLDRIPDDILISDKDKAESQIDGLATDVPKAPSLLPSLRTPIKSSLKRRLATDCLDDVDDQPGAKKLNADEESSKKRRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRLHRARLAQLRSERAENALKAAMAASSASQQLQLGASPTPTAQSQQHQDDGETETPAVTSAEEVTATAGADDGSIEASAEVEEGQLDVSAALQSMSCAVGEVGIGEGSSSEEPSDDTDDDDEDPSDEGDELDIDSYYFLQPVPTWQRRALLRAAGVRRIDTLEKDECRNIRASREHCGCSCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANISGRIEFNPVRVRTHFIHTLMRLELEKKPMHLTSRGDEDQHHLQHHHHHQQHQFQLHQHHQQQQQRQLQQMHGSNSTSDCLGAGFTGLHYGDTGHDNGSRPESLDLYSLRDDCYPNEDCLGDGHSPASRKMPHNFGQNFQQYEGQGPNNSNTGSSGSFQNPYADYQSYQNLPSTSRSPFQSQFQSGSSNPGFSMYNSYGQDSSSISNSHQTHSLIQQQQQQNQQQQQAQEQHNNLIYDAPFTQDEITGSQYTNLSTMSSCSKLESFSDLLSGRYSYFGDMVDQQQPQQQQQQPQQQQQQQHQHQPSHDSSYIANGMKIALDKAGMNGAGQPEQLDEEGCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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