Basic Information

Gene Symbol
RERE
Assembly
GCA_029851415.1
Location
CM056742.1:161506056-161518712[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-08 0.00015 23.6 0.2 2 45 122 166 121 167 0.88

Sequence Information

Coding Sequence
ATGTCAGCCGGTACCCAGGGCGAGATACGGGTTGGTCCATCGCATCAGGCGCATCTCCCTGAGTATCGGCCAGGTATTCCTCCTGGAGAACTGCTTCCTGATCCAGAGTTTTCTAAAGAAAGGGAAGAGCTAAGATGGATTCCTGCAATGACAATGGATATGGATCTACTCATGTACCTGAGAGCAGCAAGATCAGTTGCTGCTTTTGCTGGTATGTGTGATGGAGGCTCACCAGACAATTGCACAGCAGCATCTCGTGACGATACAACCATCAATGCCCTTGACACCTTGCATGACTCTGGCTATGACGCAGGAAGAGCTTTACAAGCTCTGTACAAGTGTGCTGTTCCAAAAGGCATTGATAAAAAGTGGTCTGAAGAAGAAACTAAACGTTTTGTCAAAGGTCTCCGACAGTTTGGTAAAAACTTTTCACGCATCAGGAAGGATCTCCTACCACACAAAGATACGCCCGAGCTCGTCGAGTTCTACTATCTGTGGAAGAAGACACCCGGTGCGAACAATAATCGGCCTCACCGAAGGCGTCGCCAAGGCTCTCTACGTCGAATCCGCAATACCCGTAATTCACGGGCAGGTACGCCCAAGGAGGAAGCCGCGACGCCGACGAGTGGTGAGACACCCCCAGCAAGTGCCAGCAGCAACTCTAAGGAGGGTAGCAGTAGCACGAGTTTAGCCGGAACACCCGGCGTTGAATCCGAGAGTAGCAGCAGCAACGGGGCAGGGCCAATCGGGCCTACCCACAGCAGCAGCACCACGGCGTCGAGCAATAGTAGCAGTAACCCCGCACCAGGGGAGGTGAGCTCCGTTACCGAGGACGATAACTCCGAGGAGGACAGTGACTCGCGAGACACCAACACCAATGGAGTCTCTCATTCCTGTCAACACTGCTTTTCGAGTAGTTCTAAGGACTATCAGGTCACTGGTAAAGACAGGCTTCTCCTCTGTGCGGAATGTCGGGCTCATTTGAAGAAAACGGGCGAGTTGCCGCCAGCACCGCCCTATCTTTTCCGACCGGTACCGGCGGAGTCACCCGACAGTCCTGGACGCATGAGAACGAGAAACAAGGCCAAAGAGACTCCGAGAGCTTCGAGGCCACGAAGAACCGGTGGTACGGATACTCCTGACCAAGAGAAACAACAGTCTCAGCAGTCATCTCAACCACAGTCGCAACAGCCGCAGTCGCAAGCGCAACCGCAGCCTCAGTTACAACCTCAAACTCAGCCTCAAGCTCAGTCACAGTCTCAATCTCAATCCCAGCCTCAGTCTCAATCTCAGCCACAGACTCAGCCACAATTACAACCAAGCAACGAAAAGCCCAAAAAATCAAAGTCTTCCAGCAAACCAGAAACTCCGAAGAAGGGTCATAAGCGTCTTACAACAGACGAACAAGATGAGGATAAGGAATCGCAAAAACGCAAGCGAGGTGCTGACAGGCCTGAAAGTCCTTCGGAATCGCTTACCACGGATAGCAACTCGCTTATGGATGAGCCGGAACGTGATACAGAAACGGAAGCACCTGAAAATAATATTCATAGCAATAGTAATCCACCCATAGTGACTAATACTGTAGCCAATGTATCGACAACGAGTTGTAGCACCGGCACTACAAGTCTAACTATTGCTGGACATCCGGTTGAGATCAATCCAGTCAGTCCTGCGACGACGCCTCCTCCGGAACCATGCGAACCTCCTCCACCAATATTGACACCCATCTCTCCCCCGCAACCATTGCAGCAAACACAGCTTCATCCACAACCGCCGATGCAACCGCTCATACAGAGTCTACCAATTTCGGTACCAGTCATACACGCTCGTGATACTCTGATCGATAAAAAGCCGTTAATCGACGATTCCAAAGACCCAAAGGATCATACGGAGGACATGTCTTTGTCTTCGAGCCAGACAATGAAGTTCAAACCGATTAAACTGGAATCTATGAAGATTGAGCCGCTGAAGCTGGAACCTATGAAAATGGAGCCAATAAAACTGGAACCCTTGCCGATGAAGCTGGAGCCGCCTCCCATGCCCATAAAAATGGAGCCTATGGCTCCGATGCCCATGCCACCGATGCCTATGCCCATGTCGATGACGATACCTATTCCGAATATGCCGATGTCGCTGCCCTTACCTGTATCAATGGACCCGTCAGCTTTGCCTCCCGTGAAAGAAGAACCCATGGATACAACACCagaacagcaacagcagcatcaaCAACCACCGCTTCCTCCACTACCACCACCATTACCACAACAGCAGCAACCGCGTCCACCGCTTCAGTCTCAAACATCGACGATACctccgccgccaccaccacctatCCCTCCTTCGTCTCAGTCACAGCACCAGCCGTCGCAATTGGCACACAATGTACCACAGCCTCTACCTctgaatgaaataaataatcaaaatatacCGCGCAACCTATCGCAGTCGATTGGTAGCCCAGCGCCAGTAGCTCTGTCGATTGCAAGTATGGCTGGGCCACCTATGCCACAGTCTGCCCCAGCCATAATTTCTGGCCCTGCTTCGTCAATGGCCATGCCATCCAGCACGACAACTCAGTCGCACCCGTTGAATATGCAGTACGGATCTGCACCGAGCTCGATAATCACGGCTTCGAGTCAACCCCCGAGCCTTGGAGTACCTCCTCCATCCTTACAGATACCTCCAGGATTGTCAATGCCGCCTTTGCCACCGCCTCCACCAAGCCTGCTACAGTCTGTGCGAGATCTGAGCCAGCCACACCCGGAGAATATGTCAACGACGAGTGCGGGTGCGCCACCACCACCAATACCCACAAGTTTGGCGATGCCTCCACTTGGCGGACCTCCACCTCTGAATCTTAGTATACCGCAGAACCTGCCTCCTCAATTGCCGCCTATTTCGGGCTCGCCTCAGCCCCTTGGCTTAACGGTGCTGCCTCCGGATAACAGAACAATGCCTGATAGAATAATGCCGGATGATAGGTTACCCTCTGATCGTATGAGGGATAGTAGAATCACCGATAGGATACAAGATAGAATAAACGATAGAATGCCGCAAGAGAGGATATCGCAGGATAGGGTGCCACAGGATAGAATGGCGCAAGATAGGATGTCTCAAGACAGGATGCCGGAACGAATGCCGGATAGGATGCAAGACCGAATTCAAGATAGAATTCAAGATAGGATGCCGTCTGATCGCATGCCATCTGACAGAATGCCAGAGCGACTGGGTCCAGAAAGAGAGGACCGGGAACCAGAACTACCTCCAAGAGATCAACCTCTTCAACAAGCCAGACCTGAGCCTCTGAATATGTTCCAGCCAATTcaaccaccgccaccaccaatGTTGCCGGGCGACAGAGCACCTCTATACAGTCTGGCTGGGACACCACCAATGGAGCCTCAGAACTTGAAAATCAAGCAGGAGATACTTCCACCGGAACCTGATCCGCTTCAGAGTCTAAAAGAAGTTAAAGTTCCTGGTTTTCAAACTAGTTTTCCAGGTCCAAGTTTAGACAACATCAAGAAAGATCCAGACGGTGCAAGTGGACATGGTGGCAGCAGTAGTAATAATAGCAAACCTCCTACGCCGAGCAAGCATTCGTCATCCTCTTCATCGTCAAACCATCATCAAGCTCCCCAAATGCAGTCAGTTGTAGCCTCACCCCAACCCAGTATGCCTCATCCTCCGACGTCGATTCCTCAACCTGTGATGCACCCTATACAACAAACTAGCCCACACATGGCTCATCCTTTCCATCCCCACCATCCCCTTATGCACCATTCATTCCTGGCAGCGATGCATCCGTATCATCCACACGCTTACCCTGGCTACCCGACTGTGGCTGGTTATCCAGCGTTTCCAGCCTATGCATATGGTCCTGTGCCACACGCCATACCACCACCGTCGCCTCAACGCAGCGAAGCGACTACTATGATGACTGCGCATCACTCAAGCACCACTTCAAGCGTTTCGACTCGCGAGGAGGGTGACAATCTCATCGCAACTCATCATCACCACTCGTCGTCGTCGATGCATCAAGCTACGACTCTTCATCACGATAAACTTCTCACAATATCGTCACACAGTTCACATAGTCACAGCCATTCGCAGCAGCATAGTAGCAGTAGCAGCACTAGTTCTCGAAGCAAACCTTCATCTCTGATGTCGTCGGCAGCGTGTCTGACCTCGTCGAGTTCGTTGCACTCGCATCATCACAGGCCACTGCAATCGCAGCTCGGGCCGCCACCTCCACAGCCTCCGCCCCAGGAACCCAAAATTGAACCAGATCTCATGGAGCCCGAGCCTGAGGAGCCACCGAGTCCACGCACAGGTCCTTCACCGGAGCCACGAATCGAGGATTCCGAGTGTCATCGATCGCAGTCGGCAATATTCCTACGTCATTGGAATCGTGGTGAAAATAATTCATGCACAAGGACTGATTTGACATTTAAACCCGTTCCCGATTCAAAGCTGGCTCGAAAACGCGATGAGCGCTCGAGAAAGCAAGCAGAGCGCGAACGAGAAGAGCGGGATAGAGCTCAAGCGCAACAGGCCCGGAAAATGGCCACCCCTGAGAAACAGCCAGAGTGCAAGCCTCCCAGTCGAGGACCTCTCGAACCCGTTGTCTCTCCGTACGACAGGTACGCCACGAGGCCTACTGCTTACGCGGATACGCCTGCTCTTAGGCAGCTATCCGAGTACGCGAGGCCGCACGCGGCTTTCTCTCCTGCCAGACACCCTGGCCCGGATGCCATGTTACACTATATGTATGGCCCCGGAGCCCGGGAGAGGTTCGAGTTGGAACATCTCGAACGCGAGAAGAGAGAAAGGGAGATACGAGATTTGAGAGAAAGAGAACTCAACGACCGATTTAAGTTTCAAAAGTACTCAATTGGTAGTATTTTTCCAAATGAGGAACTCCTCAAAGGTGCGCCTCGGCCAATAGCTGCGCCAGTAGATCCACACTGGTTAGAAATTCAGAGGAGGTATGCGGCTTCTGGAGGTTTAGCGCCTCCCGGTCCTTCAGCACCACCTCAAAGTTTACACCAGTTTGGTCTGTATGCGGTACCACCAGGACCAAGCCAGCTCGACAGAGAACGCCTTGAACGATTAGCGATGTCGGGTTTAGGTATGGCAGCTAATGCAGCCGCGGCGGCGGCAGCAGGGGCTCCGACTGGCTCTGCTGGGGCACCTCATCCAGGCGCTTCTCATCCTCATGGTCAACTCGACGAGAGGCTCGCCCTGGCTGCGGATCCAATGGTGCGACTTCAGATGGCCGGCATCTCACCCGAGTACCACGCTCATACACACGCTCATACGCACGCCCATACCCATCTGCATCTGCACCCTGGACAGCAGCAAGCGGCGGCTCAACAGCAAGCAGctcaacagcagcaacaacagcagcaagaGGCCGCGGCCGCGGCTGCTGGATTCCCTCTGCCCGCTGCTGGCAACTATCCAAGGCCTGGCTTGATAGGTCGTGAACCACTCGCCTTGCACCCAGCCGAATTACTCGGCAGGCCGTACGCTGATATGGCTGCGCACCATGAGCAGATACAGCGACACCTCATGATGGAACGCGATCGTTTTCCGCCTCACGTTTCACTCGTTGCACACCACGAGGAGTACATAAGgCAACAACGCGAGCGTGAACTCAAAGTTCGTGCAATGGAAGAAGCGACCCGAGGATCGCGCCCATAG
Protein Sequence
MSAGTQGEIRVGPSHQAHLPEYRPGIPPGELLPDPEFSKEREELRWIPAMTMDMDLLMYLRAARSVAAFAGMCDGGSPDNCTAASRDDTTINALDTLHDSGYDAGRALQALYKCAVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEAATPTSGETPPASASSNSKEGSSSTSLAGTPGVESESSSSNGAGPIGPTHSSSTTASSNSSSNPAPGEVSSVTEDDNSEEDSDSRDTNTNGVSHSCQHCFSSSSKDYQVTGKDRLLLCAECRAHLKKTGELPPAPPYLFRPVPAESPDSPGRMRTRNKAKETPRASRPRRTGGTDTPDQEKQQSQQSSQPQSQQPQSQAQPQPQLQPQTQPQAQSQSQSQSQPQSQSQPQTQPQLQPSNEKPKKSKSSSKPETPKKGHKRLTTDEQDEDKESQKRKRGADRPESPSESLTTDSNSLMDEPERDTETEAPENNIHSNSNPPIVTNTVANVSTTSCSTGTTSLTIAGHPVEINPVSPATTPPPEPCEPPPPILTPISPPQPLQQTQLHPQPPMQPLIQSLPISVPVIHARDTLIDKKPLIDDSKDPKDHTEDMSLSSSQTMKFKPIKLESMKIEPLKLEPMKMEPIKLEPLPMKLEPPPMPIKMEPMAPMPMPPMPMPMSMTIPIPNMPMSLPLPVSMDPSALPPVKEEPMDTTPEQQQQHQQPPLPPLPPPLPQQQQPRPPLQSQTSTIPPPPPPPIPPSSQSQHQPSQLAHNVPQPLPLNEINNQNIPRNLSQSIGSPAPVALSIASMAGPPMPQSAPAIISGPASSMAMPSSTTTQSHPLNMQYGSAPSSIITASSQPPSLGVPPPSLQIPPGLSMPPLPPPPPSLLQSVRDLSQPHPENMSTTSAGAPPPPIPTSLAMPPLGGPPPLNLSIPQNLPPQLPPISGSPQPLGLTVLPPDNRTMPDRIMPDDRLPSDRMRDSRITDRIQDRINDRMPQERISQDRVPQDRMAQDRMSQDRMPERMPDRMQDRIQDRIQDRMPSDRMPSDRMPERLGPEREDREPELPPRDQPLQQARPEPLNMFQPIQPPPPPMLPGDRAPLYSLAGTPPMEPQNLKIKQEILPPEPDPLQSLKEVKVPGFQTSFPGPSLDNIKKDPDGASGHGGSSSNNSKPPTPSKHSSSSSSSNHHQAPQMQSVVASPQPSMPHPPTSIPQPVMHPIQQTSPHMAHPFHPHHPLMHHSFLAAMHPYHPHAYPGYPTVAGYPAFPAYAYGPVPHAIPPPSPQRSEATTMMTAHHSSTTSSVSTREEGDNLIATHHHHSSSSMHQATTLHHDKLLTISSHSSHSHSHSQQHSSSSSTSSRSKPSSLMSSAACLTSSSSLHSHHHRPLQSQLGPPPPQPPPQEPKIEPDLMEPEPEEPPSPRTGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLTFKPVPDSKLARKRDERSRKQAEREREERDRAQAQQARKMATPEKQPECKPPSRGPLEPVVSPYDRYATRPTAYADTPALRQLSEYARPHAAFSPARHPGPDAMLHYMYGPGARERFELEHLEREKREREIRDLRERELNDRFKFQKYSIGSIFPNEELLKGAPRPIAAPVDPHWLEIQRRYAASGGLAPPGPSAPPQSLHQFGLYAVPPGPSQLDRERLERLAMSGLGMAANAAAAAAAGAPTGSAGAPHPGASHPHGQLDERLALAADPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPGQQQAAAQQQAAQQQQQQQQEAAAAAAGFPLPAAGNYPRPGLIGREPLALHPAELLGRPYADMAAHHEQIQRHLMMERDRFPPHVSLVAHHEEYIRQQRERELKVRAMEEATRGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-